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27 | <div class="navpath"><a class="el" href="namespacebdm.html">bdm</a>::<a class="el" href="classbdm_1_1MixEF.html">MixEF</a> |
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31 | <h1>bdm::MixEF Class Reference</h1><!-- doxytag: class="bdm::MixEF" --><!-- doxytag: inherits="bdm::BMEF" -->Mixture of Exponential Family Densities. |
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32 | <a href="#_details">More...</a> |
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33 | <p> |
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34 | <code>#include <<a class="el" href="mixef_8h-source.html">mixef.h</a>></code> |
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35 | <p> |
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36 | <div class="dynheader"> |
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37 | Inheritance diagram for bdm::MixEF:</div> |
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38 | <div class="dynsection"> |
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39 | <p><center><img src="classbdm_1_1MixEF__inherit__graph.png" border="0" usemap="#bdm_1_1MixEF__inherit__map" alt="Inheritance graph"></center> |
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40 | <map name="bdm_1_1MixEF__inherit__map"> |
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41 | <area shape="rect" href="classbdm_1_1BMEF.html" title="Estimator for Exponential family." alt="" coords="15,161,108,188"><area shape="rect" href="classbdm_1_1BM.html" title="Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities." alt="" coords="23,84,100,111"><area shape="rect" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects." alt="" coords="5,7,117,33"></map> |
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42 | <center><font size="2">[<a href="graph_legend.html">legend</a>]</font></center></div> |
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43 | <div class="dynheader"> |
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44 | Collaboration diagram for bdm::MixEF:</div> |
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45 | <div class="dynsection"> |
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46 | <p><center><img src="classbdm_1_1MixEF__coll__graph.png" border="0" usemap="#bdm_1_1MixEF__coll__map" alt="Collaboration graph"></center> |
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47 | <map name="bdm_1_1MixEF__coll__map"> |
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48 | <area shape="rect" href="classbdm_1_1BMEF.html" title="Estimator for Exponential family." alt="" coords="5,369,99,396"><area shape="rect" href="classbdm_1_1multiBM.html" title="Estimator for Multinomial density." alt="" coords="108,465,217,492"><area shape="rect" href="classbdm_1_1BM.html" title="Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities." alt="" coords="13,183,91,209"><area shape="rect" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects." alt="" coords="64,7,176,33"><area shape="rect" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables." alt="" coords="83,87,157,113"><area shape="rect" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density." alt="" coords="139,183,224,209"><area shape="rect" href="classbdm_1_1eDirich.html" title="Dirichlet posterior density." alt="" coords="123,369,224,396"><area shape="rect" href="classbdm_1_1eEF.html" title="General conjugate exponential family posterior density." alt="" coords="136,263,216,289"><area shape="rect" href="classbdm_1_1eprod.html" title="Product of independent epdfs. For dependent pdfs, use mprod." alt="" coords="212,316,308,343"></map> |
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49 | <center><font size="2">[<a href="graph_legend.html">legend</a>]</font></center></div> |
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50 | |
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51 | <p> |
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52 | <a href="classbdm_1_1MixEF-members.html">List of all members.</a><table border="0" cellpadding="0" cellspacing="0"> |
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53 | <tr><td></td></tr> |
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54 | <tr><td colspan="2"><br><h2>Public Member Functions</h2></td></tr> |
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55 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="4efe67d414ff34a1e7534004fd061241"></a><!-- doxytag: member="bdm::MixEF::MixEF" ref="4efe67d414ff34a1e7534004fd061241" args="(const Array< BMEF * > &Coms0, const vec &alpha0)" --> |
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56 | </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#4efe67d414ff34a1e7534004fd061241">MixEF</a> (const Array< <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> * > &Coms0, const vec &alpha0)</td></tr> |
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57 | |
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58 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Full constructor. <br></td></tr> |
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59 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="0266854387338ba757e6192d62907984"></a><!-- doxytag: member="bdm::MixEF::MixEF" ref="0266854387338ba757e6192d62907984" args="()" --> |
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60 | </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#0266854387338ba757e6192d62907984">MixEF</a> ()</td></tr> |
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61 | |
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62 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Constructor of empty mixture. <br></td></tr> |
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63 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="9577de85c3e3481f7c0e23cf8f87c482"></a><!-- doxytag: member="bdm::MixEF::MixEF" ref="9577de85c3e3481f7c0e23cf8f87c482" args="(const MixEF &M2)" --> |
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64 | </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#9577de85c3e3481f7c0e23cf8f87c482">MixEF</a> (const <a class="el" href="classbdm_1_1MixEF.html">MixEF</a> &M2)</td></tr> |
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65 | |
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66 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Copy constructor. <br></td></tr> |
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67 | <tr><td class="memItemLeft" nowrap align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#0c2a50789b30769964a909d217125ed2">init</a> (<a class="el" href="classbdm_1_1BMEF.html">BMEF</a> *Com0, const mat &Data, int c=5)</td></tr> |
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68 | |
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69 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5bd7da667da183eed1577f11dff0c1f1"></a><!-- doxytag: member="bdm::MixEF::bayes" ref="5bd7da667da183eed1577f11dff0c1f1" args="(const vec &dt)" --> |
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70 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#5bd7da667da183eed1577f11dff0c1f1">bayes</a> (const vec &dt)</td></tr> |
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71 | |
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72 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Recursive EM-like algorithm (QB-variant), see Karny et. al, 2006. <br></td></tr> |
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73 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5c41d5a4403da6e629f6bdfc70c43d20"></a><!-- doxytag: member="bdm::MixEF::bayes" ref="5c41d5a4403da6e629f6bdfc70c43d20" args="(const mat &dt)" --> |
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74 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#5c41d5a4403da6e629f6bdfc70c43d20">bayes</a> (const mat &dt)</td></tr> |
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75 | |
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76 | <tr><td class="mdescLeft"> </td><td class="mdescRight">EM algorithm. <br></td></tr> |
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77 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5de521c395e93478df00d881ab8dac81"></a><!-- doxytag: member="bdm::MixEF::bayesB" ref="5de521c395e93478df00d881ab8dac81" args="(const mat &dt, const vec &wData)" --> |
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78 | void </td><td class="memItemRight" valign="bottom"><b>bayesB</b> (const mat &dt, const vec &wData)</td></tr> |
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79 | |
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80 | <tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#da724da464a75e07521941e430929efa">logpred</a> (const vec &dt) const </td></tr> |
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81 | |
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82 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="33d0b3da1d10bf149d41ee74f6284a19"></a><!-- doxytag: member="bdm::MixEF::_epdf" ref="33d0b3da1d10bf149d41ee74f6284a19" args="() const " --> |
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83 | const <a class="el" href="classbdm_1_1epdf.html">epdf</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#33d0b3da1d10bf149d41ee74f6284a19">_epdf</a> () const </td></tr> |
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84 | |
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85 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Returns a reference to the <a class="el" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> representing posterior density on parameters. <br></td></tr> |
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86 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="ea8be6f0703d87b7c4c3e77fd07e28c8"></a><!-- doxytag: member="bdm::MixEF::_e" ref="ea8be6f0703d87b7c4c3e77fd07e28c8" args="() const " --> |
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87 | const <a class="el" href="classbdm_1_1eprod.html">eprod</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#ea8be6f0703d87b7c4c3e77fd07e28c8">_e</a> () const </td></tr> |
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88 | |
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89 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Returns a pointer to the <a class="el" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> representing posterior density on parameters. Use with care! <br></td></tr> |
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90 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5105973c0f790f08d1dfb79c2a3f6e1c"></a><!-- doxytag: member="bdm::MixEF::predictor" ref="5105973c0f790f08d1dfb79c2a3f6e1c" args="(const RV &rv) const " --> |
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91 | <a class="el" href="classbdm_1_1emix.html">emix</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#5105973c0f790f08d1dfb79c2a3f6e1c">predictor</a> (const <a class="el" href="classbdm_1_1RV.html">RV</a> &<a class="el" href="classbdm_1_1BM.html#18d6db4af8ee42077741d9e3618153ca">rv</a>) const </td></tr> |
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92 | |
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93 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Constructs a predictive density (marginal density on data). <br></td></tr> |
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94 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="f0dfb4375fef4e61c4cb062e5bac7c8c"></a><!-- doxytag: member="bdm::MixEF::flatten" ref="f0dfb4375fef4e61c4cb062e5bac7c8c" args="(const BMEF *M2)" --> |
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95 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#f0dfb4375fef4e61c4cb062e5bac7c8c">flatten</a> (const <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> *M2)</td></tr> |
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96 | |
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97 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Flatten the density as if it was not estimated from the data. <br></td></tr> |
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98 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="251ef6fc51757712693da5faae5317c9"></a><!-- doxytag: member="bdm::MixEF::_Coms" ref="251ef6fc51757712693da5faae5317c9" args="(int i)" --> |
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99 | <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#251ef6fc51757712693da5faae5317c9">_Coms</a> (int i)</td></tr> |
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100 | |
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101 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Access function. <br></td></tr> |
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102 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="664529d52cc667383b39eeb440ccd577"></a><!-- doxytag: member="bdm::MixEF::set_method" ref="664529d52cc667383b39eeb440ccd577" args="(MixEF_METHOD M)" --> |
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103 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#664529d52cc667383b39eeb440ccd577">set_method</a> (MixEF_METHOD M)</td></tr> |
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104 | |
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105 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Set which method is to be used. <br></td></tr> |
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106 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="d2b528b7a41ca67163152142f5404051"></a><!-- doxytag: member="bdm::MixEF::set_statistics" ref="d2b528b7a41ca67163152142f5404051" args="(const BMEF *BM0)" --> |
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107 | virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BMEF.html#d2b528b7a41ca67163152142f5404051">set_statistics</a> (const <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> *BM0)</td></tr> |
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108 | |
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109 | <tr><td class="mdescLeft"> </td><td class="mdescRight">get statistics from another model <br></td></tr> |
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110 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="bf58deb99af2a6cc674f13ff90300de6"></a><!-- doxytag: member="bdm::MixEF::bayes" ref="bf58deb99af2a6cc674f13ff90300de6" args="(const vec &data, const double w)" --> |
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111 | virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BMEF.html#bf58deb99af2a6cc674f13ff90300de6">bayes</a> (const vec &data, const double w)</td></tr> |
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112 | |
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113 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Weighted update of sufficient statistics (Bayes rule). <br></td></tr> |
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114 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5912dbcf28ae711e30b08c2fa766a3e6"></a><!-- doxytag: member="bdm::MixEF::_copy_" ref="5912dbcf28ae711e30b08c2fa766a3e6" args="(bool changerv=false)" --> |
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115 | <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BMEF.html#5912dbcf28ae711e30b08c2fa766a3e6">_copy_</a> (bool changerv=false)</td></tr> |
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116 | |
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117 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Flatten the posterior as if to keep nu0 data. <br></td></tr> |
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118 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="1dee3fddaf021e62d925289660a707dc"></a><!-- doxytag: member="bdm::MixEF::bayesB" ref="1dee3fddaf021e62d925289660a707dc" args="(const mat &Dt)" --> |
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119 | virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#1dee3fddaf021e62d925289660a707dc">bayesB</a> (const mat &Dt)</td></tr> |
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120 | |
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121 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Batch Bayes rule (columns of Dt are observations). <br></td></tr> |
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122 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="0e8ebe61fb14990abe1254bd3dda5fae"></a><!-- doxytag: member="bdm::MixEF::logpred_m" ref="0e8ebe61fb14990abe1254bd3dda5fae" args="(const mat &dt) const " --> |
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123 | vec </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#0e8ebe61fb14990abe1254bd3dda5fae">logpred_m</a> (const mat &dt) const </td></tr> |
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124 | |
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125 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Matrix version of logpred. <br></td></tr> |
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126 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="40a3c891996391e3135518053a917793"></a><!-- doxytag: member="bdm::MixEF::_rv" ref="40a3c891996391e3135518053a917793" args="() const " --> |
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127 | const <a class="el" href="classbdm_1_1RV.html">RV</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#40a3c891996391e3135518053a917793">_rv</a> () const </td></tr> |
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128 | |
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129 | <tr><td class="mdescLeft"> </td><td class="mdescRight">access function <br></td></tr> |
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130 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="5be65d37dedfe33a3671e7065f523a70"></a><!-- doxytag: member="bdm::MixEF::_ll" ref="5be65d37dedfe33a3671e7065f523a70" args="() const " --> |
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131 | double </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#5be65d37dedfe33a3671e7065f523a70">_ll</a> () const </td></tr> |
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132 | |
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133 | <tr><td class="mdescLeft"> </td><td class="mdescRight">access function <br></td></tr> |
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134 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="236b3abbcc93594fc97cd86d82c1a83f"></a><!-- doxytag: member="bdm::MixEF::set_evalll" ref="236b3abbcc93594fc97cd86d82c1a83f" args="(bool evl0)" --> |
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135 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#236b3abbcc93594fc97cd86d82c1a83f">set_evalll</a> (bool evl0)</td></tr> |
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136 | |
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137 | <tr><td class="mdescLeft"> </td><td class="mdescRight">access function <br></td></tr> |
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138 | <tr><td colspan="2"><br><h2>Protected Member Functions</h2></td></tr> |
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139 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="d74a8d1370c63c93ec554908ae3e6006"></a><!-- doxytag: member="bdm::MixEF::build_est" ref="d74a8d1370c63c93ec554908ae3e6006" args="()" --> |
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140 | void </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#d74a8d1370c63c93ec554908ae3e6006">build_est</a> ()</td></tr> |
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141 | |
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142 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Auxiliary function for use in constructors. <br></td></tr> |
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143 | <tr><td colspan="2"><br><h2>Protected Attributes</h2></td></tr> |
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144 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="38ca1d86e977d1c38810a3c95bf074a5"></a><!-- doxytag: member="bdm::MixEF::n" ref="38ca1d86e977d1c38810a3c95bf074a5" args="" --> |
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145 | int </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#38ca1d86e977d1c38810a3c95bf074a5">n</a></td></tr> |
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146 | |
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147 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Number of components. <br></td></tr> |
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148 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="90c21ab5a2af56d4b49e2eaef6eccc08"></a><!-- doxytag: member="bdm::MixEF::Coms" ref="90c21ab5a2af56d4b49e2eaef6eccc08" args="" --> |
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149 | Array< <a class="el" href="classbdm_1_1BMEF.html">BMEF</a> * > </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#90c21ab5a2af56d4b49e2eaef6eccc08">Coms</a></td></tr> |
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150 | |
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151 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Models for Components of <img class="formulaInl" alt="$\theta_i$" src="form_69.png">. <br></td></tr> |
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152 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="e39faa70cebadc3296bd249040105e86"></a><!-- doxytag: member="bdm::MixEF::weights" ref="e39faa70cebadc3296bd249040105e86" args="" --> |
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153 | <a class="el" href="classbdm_1_1multiBM.html">multiBM</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#e39faa70cebadc3296bd249040105e86">weights</a></td></tr> |
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154 | |
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155 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Statistics for weights. <br></td></tr> |
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156 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="9413fb7f1836237aac807fb9f245e4f6"></a><!-- doxytag: member="bdm::MixEF::est" ref="9413fb7f1836237aac807fb9f245e4f6" args="" --> |
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157 | <a class="el" href="classbdm_1_1eprod.html">eprod</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#9413fb7f1836237aac807fb9f245e4f6">est</a></td></tr> |
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158 | |
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159 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Posterior on component parameters. <br></td></tr> |
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160 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="a2376ddadb7573532404452d0c2dd28a"></a><!-- doxytag: member="bdm::MixEF::method" ref="a2376ddadb7573532404452d0c2dd28a" args="" --> |
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161 | MixEF_METHOD </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1MixEF.html#a2376ddadb7573532404452d0c2dd28a">method</a></td></tr> |
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162 | |
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163 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Flag for a method that is used in the inference. <br></td></tr> |
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164 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="1331865e10fb1ccef65bb4c47fa3be64"></a><!-- doxytag: member="bdm::MixEF::frg" ref="1331865e10fb1ccef65bb4c47fa3be64" args="" --> |
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165 | double </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BMEF.html#1331865e10fb1ccef65bb4c47fa3be64">frg</a></td></tr> |
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166 | |
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167 | <tr><td class="mdescLeft"> </td><td class="mdescRight">forgetting factor <br></td></tr> |
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168 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="06e7b3ac03e10017d4288c76888e2865"></a><!-- doxytag: member="bdm::MixEF::last_lognc" ref="06e7b3ac03e10017d4288c76888e2865" args="" --> |
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169 | double </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BMEF.html#06e7b3ac03e10017d4288c76888e2865">last_lognc</a></td></tr> |
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170 | |
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171 | <tr><td class="mdescLeft"> </td><td class="mdescRight">cached value of lognc() in the previous step (used in evaluation of <code>ll</code> ) <br></td></tr> |
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172 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="18d6db4af8ee42077741d9e3618153ca"></a><!-- doxytag: member="bdm::MixEF::rv" ref="18d6db4af8ee42077741d9e3618153ca" args="" --> |
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173 | <a class="el" href="classbdm_1_1RV.html">RV</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#18d6db4af8ee42077741d9e3618153ca">rv</a></td></tr> |
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174 | |
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175 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Random variable of the posterior. <br></td></tr> |
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176 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="4064b6559d962633e4372b12f4cd204a"></a><!-- doxytag: member="bdm::MixEF::ll" ref="4064b6559d962633e4372b12f4cd204a" args="" --> |
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177 | double </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a">ll</a></td></tr> |
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178 | |
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179 | <tr><td class="mdescLeft"> </td><td class="mdescRight">Logarithm of marginalized data likelihood. <br></td></tr> |
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180 | <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="faff0ad12556fe7dc0e2807d4fd938ee"></a><!-- doxytag: member="bdm::MixEF::evalll" ref="faff0ad12556fe7dc0e2807d4fd938ee" args="" --> |
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181 | bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee">evalll</a></td></tr> |
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182 | |
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183 | <tr><td class="mdescLeft"> </td><td class="mdescRight">If true, the filter will compute likelihood of the data record and store it in <code>ll</code> . Set to false if you want to save computational time. <br></td></tr> |
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184 | </table> |
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185 | <hr><a name="_details"></a><h2>Detailed Description</h2> |
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186 | Mixture of Exponential Family Densities. |
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187 | <p> |
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188 | An approximate estimation method for models with latent discrete variable, such as mixture models of the following kind: <p class="formulaDsp"> |
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189 | <img class="formulaDsp" alt="\[ f(y_t|\psi_t, \Theta) = \sum_{i=1}^{n} w_i f(y_t|\psi_t, \theta_i) \]" src="form_66.png"> |
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190 | <p> |
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191 | where <img class="formulaInl" alt="$\psi$" src="form_67.png"> is a known function of past outputs, <img class="formulaInl" alt="$w=[w_1,\ldots,w_n]$" src="form_68.png"> are component weights, and component parameters <img class="formulaInl" alt="$\theta_i$" src="form_69.png"> are assumed to be mutually independent. <img class="formulaInl" alt="$\Theta$" src="form_70.png"> is an aggregation af all component parameters and weights, i.e. <img class="formulaInl" alt="$\Theta = [\theta_1,\ldots,\theta_n,w]$" src="form_71.png">.<p> |
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192 | The characteristic feature of this model is that if the exact values of the latent variable were known, estimation of the parameters can be handled by a single model. For example, for the case of mixture models, posterior density for each component parameters would be a BayesianModel from Exponential Family.<p> |
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193 | This class uses EM-style type algorithms for estimation of its parameters. Under this simplification, the posterior density is a product of exponential family members, hence under EM-style approximate estimation this class itself belongs to the exponential family.<p> |
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194 | TODO: Extend <a class="el" href="classbdm_1_1BM.html" title="Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities.">BM</a> to use rvc. <hr><h2>Member Function Documentation</h2> |
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195 | <a class="anchor" name="0c2a50789b30769964a909d217125ed2"></a><!-- doxytag: member="bdm::MixEF::init" ref="0c2a50789b30769964a909d217125ed2" args="(BMEF *Com0, const mat &Data, int c=5)" --> |
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196 | <div class="memitem"> |
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197 | <div class="memproto"> |
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198 | <table class="memname"> |
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199 | <tr> |
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200 | <td class="memname">void bdm::MixEF::init </td> |
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201 | <td>(</td> |
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202 | <td class="paramtype"><a class="el" href="classbdm_1_1BMEF.html">BMEF</a> * </td> |
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203 | <td class="paramname"> <em>Com0</em>, </td> |
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204 | </tr> |
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205 | <tr> |
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206 | <td class="paramkey"></td> |
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207 | <td></td> |
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208 | <td class="paramtype">const mat & </td> |
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209 | <td class="paramname"> <em>Data</em>, </td> |
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210 | </tr> |
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211 | <tr> |
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212 | <td class="paramkey"></td> |
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213 | <td></td> |
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214 | <td class="paramtype">int </td> |
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215 | <td class="paramname"> <em>c</em> = <code>5</code></td><td> </td> |
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216 | </tr> |
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217 | <tr> |
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218 | <td></td> |
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219 | <td>)</td> |
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220 | <td></td><td></td><td></td> |
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221 | </tr> |
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222 | </table> |
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223 | </div> |
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224 | <div class="memdoc"> |
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225 | |
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226 | <p> |
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227 | Initializing the mixture by a random pick of centroids from data <dl compact><dt><b>Parameters:</b></dt><dd> |
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228 | <table border="0" cellspacing="2" cellpadding="0"> |
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229 | <tr><td valign="top"></td><td valign="top"><em>Com0</em> </td><td>Initial component - necessary to determine its type. </td></tr> |
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230 | <tr><td valign="top"></td><td valign="top"><em>Data</em> </td><td>Data on which the initialization will be done </td></tr> |
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231 | <tr><td valign="top"></td><td valign="top"><em>c</em> </td><td>Initial number of components, default=5 </td></tr> |
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232 | </table> |
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233 | </dl> |
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234 | |
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235 | <p>References <a class="el" href="libEF_8h-source.html#l00096">bdm::BMEF::_copy_()</a>, <a class="el" href="mixef_8h-source.html#l00057">build_est()</a>, <a class="el" href="mixef_8h-source.html#l00046">Coms</a>, <a class="el" href="mixef_8h-source.html#l00050">est</a>, <a class="el" href="mixef_8h-source.html#l00044">n</a>, <a class="el" href="libEF_8h-source.html#l00300">bdm::multiBM::set_parameters()</a>, <a class="el" href="libEF_8cpp-source.html#l00008">bdm::UniRNG</a>, and <a class="el" href="mixef_8h-source.html#l00048">weights</a>.</p> |
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236 | |
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237 | <p>Referenced by <a class="el" href="merger_8cpp-source.html#l00030">bdm::merger::merge()</a>.</p> |
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238 | |
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239 | </div> |
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240 | </div><p> |
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241 | <a class="anchor" name="da724da464a75e07521941e430929efa"></a><!-- doxytag: member="bdm::MixEF::logpred" ref="da724da464a75e07521941e430929efa" args="(const vec &dt) const " --> |
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242 | <div class="memitem"> |
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243 | <div class="memproto"> |
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244 | <table class="memname"> |
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245 | <tr> |
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246 | <td class="memname">double bdm::MixEF::logpred </td> |
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247 | <td>(</td> |
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248 | <td class="paramtype">const vec & </td> |
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249 | <td class="paramname"> <em>dt</em> </td> |
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250 | <td> ) </td> |
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251 | <td> const<code> [virtual]</code></td> |
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252 | </tr> |
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253 | </table> |
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254 | </div> |
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255 | <div class="memdoc"> |
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256 | |
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257 | <p> |
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258 | Evaluates predictive log-likelihood of the given data record I.e. marginal likelihood of the data with the posterior integrated out. |
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259 | <p>Reimplemented from <a class="el" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">bdm::BM</a>.</p> |
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260 | |
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261 | <p>References <a class="el" href="libEF_8h-source.html#l00298">bdm::multiBM::_epdf()</a>, <a class="el" href="mixef_8h-source.html#l00046">Coms</a>, <a class="el" href="classbdm_1_1epdf.html#565300f603ca00c989e16389d9eb42f5">bdm::epdf::mean()</a>, and <a class="el" href="mixef_8h-source.html#l00048">weights</a>.</p> |
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262 | |
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263 | <p>Referenced by <a class="el" href="merger_8h-source.html#l00090">bdm::merger::evallog()</a>, and <a class="el" href="merger_8cpp-source.html#l00030">bdm::merger::merge()</a>.</p> |
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264 | |
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265 | </div> |
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266 | </div><p> |
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267 | <hr>The documentation for this class was generated from the following files:<ul> |
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268 | <li><a class="el" href="mixef_8h-source.html">mixef.h</a><li>mixef.cpp</ul> |
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269 | </div> |
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270 | <hr size="1"><address style="text-align: right;"><small>Generated on Fri Feb 6 19:50:04 2009 for mixpp by |
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271 | <a href="http://www.doxygen.org/index.html"> |
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272 | <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.6 </small></address> |
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273 | </body> |
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274 | </html> |
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