| 1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> |
|---|
| 2 | <html><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"> |
|---|
| 3 | <title>mixpp: libBM.h Source File</title> |
|---|
| 4 | <link href="tabs.css" rel="stylesheet" type="text/css"> |
|---|
| 5 | <link href="doxygen.css" rel="stylesheet" type="text/css"> |
|---|
| 6 | </head><body> |
|---|
| 7 | <!-- Generated by Doxygen 1.5.8 --> |
|---|
| 8 | <script type="text/javascript"> |
|---|
| 9 | <!-- |
|---|
| 10 | function changeDisplayState (e){ |
|---|
| 11 | var num=this.id.replace(/[^[0-9]/g,''); |
|---|
| 12 | var button=this.firstChild; |
|---|
| 13 | var sectionDiv=document.getElementById('dynsection'+num); |
|---|
| 14 | if (sectionDiv.style.display=='none'||sectionDiv.style.display==''){ |
|---|
| 15 | sectionDiv.style.display='block'; |
|---|
| 16 | button.src='open.gif'; |
|---|
| 17 | }else{ |
|---|
| 18 | sectionDiv.style.display='none'; |
|---|
| 19 | button.src='closed.gif'; |
|---|
| 20 | } |
|---|
| 21 | } |
|---|
| 22 | function initDynSections(){ |
|---|
| 23 | var divs=document.getElementsByTagName('div'); |
|---|
| 24 | var sectionCounter=1; |
|---|
| 25 | for(var i=0;i<divs.length-1;i++){ |
|---|
| 26 | if(divs[i].className=='dynheader'&&divs[i+1].className=='dynsection'){ |
|---|
| 27 | var header=divs[i]; |
|---|
| 28 | var section=divs[i+1]; |
|---|
| 29 | var button=header.firstChild; |
|---|
| 30 | if (button!='IMG'){ |
|---|
| 31 | divs[i].insertBefore(document.createTextNode(' '),divs[i].firstChild); |
|---|
| 32 | button=document.createElement('img'); |
|---|
| 33 | divs[i].insertBefore(button,divs[i].firstChild); |
|---|
| 34 | } |
|---|
| 35 | header.style.cursor='pointer'; |
|---|
| 36 | header.onclick=changeDisplayState; |
|---|
| 37 | header.id='dynheader'+sectionCounter; |
|---|
| 38 | button.src='closed.gif'; |
|---|
| 39 | section.id='dynsection'+sectionCounter; |
|---|
| 40 | section.style.display='none'; |
|---|
| 41 | section.style.marginLeft='14px'; |
|---|
| 42 | sectionCounter++; |
|---|
| 43 | } |
|---|
| 44 | } |
|---|
| 45 | } |
|---|
| 46 | window.onload = initDynSections; |
|---|
| 47 | --> |
|---|
| 48 | </script> |
|---|
| 49 | <div class="navigation" id="top"> |
|---|
| 50 | <div class="tabs"> |
|---|
| 51 | <ul> |
|---|
| 52 | <li><a href="main.html"><span>Main Page</span></a></li> |
|---|
| 53 | <li><a href="pages.html"><span>Related Pages</span></a></li> |
|---|
| 54 | <li><a href="modules.html"><span>Modules</span></a></li> |
|---|
| 55 | <li><a href="annotated.html"><span>Classes</span></a></li> |
|---|
| 56 | <li class="current"><a href="files.html"><span>Files</span></a></li> |
|---|
| 57 | </ul> |
|---|
| 58 | </div> |
|---|
| 59 | <div class="tabs"> |
|---|
| 60 | <ul> |
|---|
| 61 | <li><a href="files.html"><span>File List</span></a></li> |
|---|
| 62 | <li><a href="globals.html"><span>File Members</span></a></li> |
|---|
| 63 | </ul> |
|---|
| 64 | </div> |
|---|
| 65 | <h1>libBM.h</h1><a href="libBM_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 |
|---|
| 66 | <a name="l00013"></a>00013 <span class="preprocessor">#ifndef BM_H</span> |
|---|
| 67 | <a name="l00014"></a>00014 <span class="preprocessor"></span><span class="preprocessor">#define BM_H</span> |
|---|
| 68 | <a name="l00015"></a>00015 <span class="preprocessor"></span> |
|---|
| 69 | <a name="l00016"></a>00016 |
|---|
| 70 | <a name="l00017"></a>00017 <span class="preprocessor">#include "../itpp_ext.h"</span> |
|---|
| 71 | <a name="l00018"></a>00018 <span class="preprocessor">#include <map></span> |
|---|
| 72 | <a name="l00019"></a>00019 |
|---|
| 73 | <a name="l00020"></a>00020 <span class="keyword">namespace </span>bdm { |
|---|
| 74 | <a name="l00021"></a>00021 <span class="keyword">using namespace </span>itpp; |
|---|
| 75 | <a name="l00022"></a>00022 <span class="keyword">using namespace </span>std; |
|---|
| 76 | <a name="l00023"></a>00023 |
|---|
| 77 | <a name="l00025"></a><a class="code" href="classbdm_1_1bdmroot.html">00025</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 78 | <a name="l00026"></a>00026 <span class="keyword">public</span>: |
|---|
| 79 | <a name="l00028"></a><a class="code" href="classbdm_1_1bdmroot.html#9c191bccc52a133d32d84edbc1a19c49">00028</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1bdmroot.html#9c191bccc52a133d32d84edbc1a19c49" title="make sure this is a virtual object">~bdmroot</a>() {} |
|---|
| 80 | <a name="l00029"></a>00029 }; |
|---|
| 81 | <a name="l00030"></a>00030 |
|---|
| 82 | <a name="l00031"></a>00031 <span class="keyword">typedef</span> std::map<string, int> RVmap; |
|---|
| 83 | <a name="l00032"></a>00032 <span class="keyword">extern</span> ivec RV_SIZES; |
|---|
| 84 | <a name="l00033"></a>00033 <span class="keyword">extern</span> Array<string> RV_NAMES; |
|---|
| 85 | <a name="l00034"></a>00034 |
|---|
| 86 | <a name="l00036"></a><a class="code" href="classbdm_1_1str.html">00036</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1str.html" title="Structure of RV (used internally), i.e. expanded RVs.">str</a> { |
|---|
| 87 | <a name="l00037"></a>00037 <span class="keyword">public</span>: |
|---|
| 88 | <a name="l00039"></a><a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0">00039</a> ivec <a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0" title="vector id ids (non-unique!)">ids</a>; |
|---|
| 89 | <a name="l00041"></a><a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a">00041</a> ivec <a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a" title="vector of times">times</a>; |
|---|
| 90 | <a name="l00043"></a><a class="code" href="classbdm_1_1str.html#7c6b9dccc6814d7bd1e8e2208a0d3f3f">00043</a> <a class="code" href="classbdm_1_1str.html#7c6b9dccc6814d7bd1e8e2208a0d3f3f" title="Default constructor.">str</a> ( ivec ids0, ivec times0 ) :<a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0" title="vector id ids (non-unique!)">ids</a> ( ids0 ),<a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a" title="vector of times">times</a> ( times0 ) { |
|---|
| 91 | <a name="l00044"></a>00044 it_assert_debug ( times0.length() ==ids0.length(),<span class="stringliteral">"Incompatible input"</span> ); |
|---|
| 92 | <a name="l00045"></a>00045 }; |
|---|
| 93 | <a name="l00046"></a>00046 }; |
|---|
| 94 | <a name="l00047"></a>00047 |
|---|
| 95 | <a name="l00086"></a><a class="code" href="classbdm_1_1RV.html">00086</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> :<span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 96 | <a name="l00087"></a>00087 <span class="keyword">protected</span>: |
|---|
| 97 | <a name="l00089"></a><a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb">00089</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a>; |
|---|
| 98 | <a name="l00091"></a><a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385">00091</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a>; |
|---|
| 99 | <a name="l00093"></a><a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b">00093</a> ivec <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a>; |
|---|
| 100 | <a name="l00095"></a><a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896">00095</a> ivec <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a>; |
|---|
| 101 | <a name="l00096"></a>00096 |
|---|
| 102 | <a name="l00097"></a>00097 <span class="keyword">private</span>: |
|---|
| 103 | <a name="l00099"></a>00099 <span class="keywordtype">void</span> init ( Array<std::string> in_names, ivec in_sizes, ivec in_times ); |
|---|
| 104 | <a name="l00100"></a>00100 <span class="keywordtype">int</span> init ( <span class="keyword">const</span> <span class="keywordtype">string</span> &name, <span class="keywordtype">int</span> size ); |
|---|
| 105 | <a name="l00101"></a>00101 <span class="keyword">public</span>: |
|---|
| 106 | <a name="l00104"></a>00104 |
|---|
| 107 | <a name="l00106"></a><a class="code" href="classbdm_1_1RV.html#3d93da01a64dab31074b25b7d93e5eae">00106</a> <a class="code" href="classbdm_1_1RV.html#3d93da01a64dab31074b25b7d93e5eae" title="Full constructor.">RV</a> ( Array<std::string> in_names, ivec in_sizes, ivec in_times ) {init ( in_names,in_sizes,in_times );}; |
|---|
| 108 | <a name="l00108"></a><a class="code" href="classbdm_1_1RV.html#5bd1bd9ec51b91578ecc83a6b2398a20">00108</a> <a class="code" href="classbdm_1_1RV.html#5bd1bd9ec51b91578ecc83a6b2398a20" title="Constructor with times=0.">RV</a> ( Array<std::string> in_names, ivec in_sizes ) {init ( in_names,in_sizes,zeros_i ( in_names.length() ) );}; |
|---|
| 109 | <a name="l00110"></a><a class="code" href="classbdm_1_1RV.html#a222dfef569e8f123180d40fde97c1cd">00110</a> <a class="code" href="classbdm_1_1RV.html#a222dfef569e8f123180d40fde97c1cd" title="Constructor with sizes=1, times=0.">RV</a> ( Array<std::string> in_names ) {init ( in_names,ones_i ( in_names.length() ),zeros_i ( in_names.length() ) );} |
|---|
| 110 | <a name="l00112"></a><a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412">00112</a> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> () :<a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a> ( 0 ),<a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a> ( 0 ),<a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( 0 ),<a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( 0 ) {}; |
|---|
| 111 | <a name="l00114"></a>00114 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> ( <span class="keywordtype">string</span> name, <span class="keywordtype">int</span> sz, <span class="keywordtype">int</span> tm=0 ); |
|---|
| 112 | <a name="l00116"></a>00116 |
|---|
| 113 | <a name="l00119"></a>00119 |
|---|
| 114 | <a name="l00121"></a>00121 <span class="keyword">friend</span> std::ostream &<a class="code" href="classbdm_1_1RV.html#cad6f15535d10437f6690cb4492176a8" title="Printing output e.g. for debugging.">operator<< </a>( std::ostream &os, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv ); |
|---|
| 115 | <a name="l00122"></a>00122 <span class="keywordtype">int</span> _dsize()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a>;} ; |
|---|
| 116 | <a name="l00124"></a>00124 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#39f9b44752376f07e346579b5ff8cbbd" title="Recount size of the corresponding data vector.">countsize</a>() <span class="keyword">const</span>; |
|---|
| 117 | <a name="l00125"></a>00125 ivec cumsizes() <span class="keyword">const</span>; |
|---|
| 118 | <a name="l00126"></a>00126 <span class="keywordtype">int</span> length()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a>;} ; |
|---|
| 119 | <a name="l00127"></a>00127 <span class="keywordtype">int</span> id ( <span class="keywordtype">int</span> at )<span class="keyword"> const</span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at );}; |
|---|
| 120 | <a name="l00128"></a>00128 <span class="keywordtype">int</span> size ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{<span class="keywordflow">return</span> RV_SIZES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at ) );}; |
|---|
| 121 | <a name="l00129"></a>00129 <span class="keywordtype">int</span> time ( <span class="keywordtype">int</span> at )<span class="keyword"> const</span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( at );}; |
|---|
| 122 | <a name="l00130"></a>00130 std::string name ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{<span class="keywordflow">return</span> RV_NAMES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at ) );}; |
|---|
| 123 | <a name="l00131"></a>00131 <span class="keywordtype">void</span> set_time ( <span class="keywordtype">int</span> at, <span class="keywordtype">int</span> time0 ) {<a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( at ) =time0;}; |
|---|
| 124 | <a name="l00133"></a>00133 |
|---|
| 125 | <a name="l00134"></a>00134 <span class="comment">//TODO why not inline and later??</span> |
|---|
| 126 | <a name="l00135"></a>00135 |
|---|
| 127 | <a name="l00138"></a>00138 |
|---|
| 128 | <a name="l00140"></a>00140 ivec <a class="code" href="classbdm_1_1RV.html#1367055b2608ad9d50d01a2da6cec869" title="Find indices of self in another rv,.">findself</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 129 | <a name="l00142"></a>00142 <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1RV.html#3bb011af88ae98f5c97955bb2c95cfee" title="Compare if rv2 is identical to this RV.">equal</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 130 | <a name="l00144"></a>00144 <span class="keywordtype">bool</span> <span class="keyword">add</span> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ); |
|---|
| 131 | <a name="l00146"></a>00146 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> <a class="code" href="classbdm_1_1RV.html#aec44dabdf0a6d90fbae95e1356eda39" title="Subtract another variable from the current one.">subt</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 132 | <a name="l00148"></a>00148 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> <a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indeces ind.">subselect</a> ( <span class="keyword">const</span> ivec &ind ) <span class="keyword">const</span>; |
|---|
| 133 | <a name="l00150"></a><a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966">00150</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966" title="Select only variables at indeces ind.">operator() </a>( <span class="keyword">const</span> ivec &ind )<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indeces ind.">subselect</a> ( ind );}; |
|---|
| 134 | <a name="l00152"></a><a class="code" href="classbdm_1_1RV.html#452fb5f7ab1eafe17932bf9f458d0415">00152</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966" title="Select only variables at indeces ind.">operator() </a>( <span class="keywordtype">int</span> di1, <span class="keywordtype">int</span> di2 )<span class="keyword"> const </span>{ |
|---|
| 135 | <a name="l00153"></a>00153 ivec sz=cumsizes(); |
|---|
| 136 | <a name="l00154"></a>00154 <span class="keywordtype">int</span> i1=0; |
|---|
| 137 | <a name="l00155"></a>00155 <span class="keywordflow">while</span> ( sz ( i1 ) <di1 ) i1++; |
|---|
| 138 | <a name="l00156"></a>00156 <span class="keywordtype">int</span> i2=i1; |
|---|
| 139 | <a name="l00157"></a>00157 <span class="keywordflow">while</span> ( sz ( i2 ) <di2 ) i2++; |
|---|
| 140 | <a name="l00158"></a>00158 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indeces ind.">subselect</a> ( linspace ( i1,i2 ) ); |
|---|
| 141 | <a name="l00159"></a>00159 }; |
|---|
| 142 | <a name="l00161"></a>00161 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#bd77cb0899f7fba1d0e34396137b7f1f" title="Shift time shifted by delta.">t</a> ( <span class="keywordtype">int</span> delta ); |
|---|
| 143 | <a name="l00163"></a>00163 |
|---|
| 144 | <a name="l00166"></a>00166 |
|---|
| 145 | <a name="l00168"></a>00168 <a class="code" href="classbdm_1_1str.html" title="Structure of RV (used internally), i.e. expanded RVs.">str</a> <a class="code" href="classbdm_1_1RV.html#8bdd7f4072749c7cc864b78a418ca388" title="generate str from rv, by expanding sizes">tostr</a>() <span class="keyword">const</span>; |
|---|
| 146 | <a name="l00171"></a>00171 ivec <a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55">dataind</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &crv ) <span class="keyword">const</span>; |
|---|
| 147 | <a name="l00174"></a>00174 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55">dataind</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv2, ivec &selfi, ivec &rv2i ) <span class="keyword">const</span>; |
|---|
| 148 | <a name="l00176"></a><a class="code" href="classbdm_1_1RV.html#9a5c5aeeaf39299d07763377b05a8241">00176</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#9a5c5aeeaf39299d07763377b05a8241" title="Minimum time-offset.">mint</a> ()<span class="keyword"> const </span>{<span class="keywordflow">return</span> min ( <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> );}; |
|---|
| 149 | <a name="l00178"></a>00178 |
|---|
| 150 | <a name="l00179"></a>00179 }; |
|---|
| 151 | <a name="l00180"></a>00180 |
|---|
| 152 | <a name="l00181"></a>00181 |
|---|
| 153 | <a name="l00183"></a>00183 RV concat ( <span class="keyword">const</span> RV &rv1, <span class="keyword">const</span> RV &rv2 ); |
|---|
| 154 | <a name="l00184"></a>00184 |
|---|
| 155 | <a name="l00186"></a>00186 <span class="keyword">extern</span> RV RV0; |
|---|
| 156 | <a name="l00187"></a>00187 |
|---|
| 157 | <a name="l00189"></a>00189 |
|---|
| 158 | <a name="l00190"></a><a class="code" href="classbdm_1_1fnc.html">00190</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1fnc.html" title="Class representing function of variable represented by rv.">fnc</a> :<span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 159 | <a name="l00191"></a>00191 <span class="keyword">protected</span>: |
|---|
| 160 | <a name="l00193"></a><a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62">00193</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62" title="Length of the output vector.">dimy</a>; |
|---|
| 161 | <a name="l00194"></a>00194 <span class="keyword">public</span>: |
|---|
| 162 | <a name="l00196"></a><a class="code" href="classbdm_1_1fnc.html#65e9fb11f6cc7884018d8f229bcabbb7">00196</a> <a class="code" href="classbdm_1_1fnc.html#65e9fb11f6cc7884018d8f229bcabbb7" title="default constructor">fnc</a> ( ) {}; |
|---|
| 163 | <a name="l00198"></a><a class="code" href="classbdm_1_1fnc.html#6277b11d7fffc7ef8a2fa3e84ae5bad4">00198</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1fnc.html#6277b11d7fffc7ef8a2fa3e84ae5bad4" title="function evaluates numerical value of at cond ">eval</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 164 | <a name="l00199"></a>00199 <span class="keywordflow">return</span> vec ( 0 ); |
|---|
| 165 | <a name="l00200"></a>00200 }; |
|---|
| 166 | <a name="l00201"></a>00201 |
|---|
| 167 | <a name="l00203"></a><a class="code" href="classbdm_1_1fnc.html#0786e40fade2663a70d654c1dda5d73e">00203</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1fnc.html#0786e40fade2663a70d654c1dda5d73e" title="function substitutes given value into an appropriate position">condition</a> ( <span class="keyword">const</span> vec &val ) {}; |
|---|
| 168 | <a name="l00204"></a>00204 |
|---|
| 169 | <a name="l00206"></a><a class="code" href="classbdm_1_1fnc.html#083832294da9d1e40804158b979c4341">00206</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1fnc.html#083832294da9d1e40804158b979c4341" title="access function">dimension</a>()<span class="keyword"> const</span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62" title="Length of the output vector.">dimy</a>;} |
|---|
| 170 | <a name="l00207"></a>00207 }; |
|---|
| 171 | <a name="l00208"></a>00208 |
|---|
| 172 | <a name="l00209"></a>00209 <span class="keyword">class </span>mpdf; |
|---|
| 173 | <a name="l00210"></a>00210 |
|---|
| 174 | <a name="l00212"></a>00212 |
|---|
| 175 | <a name="l00213"></a><a class="code" href="classbdm_1_1epdf.html">00213</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> :<span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 176 | <a name="l00214"></a>00214 <span class="keyword">protected</span>: |
|---|
| 177 | <a name="l00216"></a><a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce">00216</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>; |
|---|
| 178 | <a name="l00218"></a><a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8">00218</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>; |
|---|
| 179 | <a name="l00219"></a>00219 |
|---|
| 180 | <a name="l00220"></a>00220 <span class="keyword">public</span>: |
|---|
| 181 | <a name="l00232"></a>00232 <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>() :<a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ( 0 ),<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ( ) {}; |
|---|
| 182 | <a name="l00233"></a>00233 <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> &e ) :<a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ( e.<a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ),<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ( e.<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ) {}; |
|---|
| 183 | <a name="l00234"></a>00234 epdf ( <span class="keyword">const</span> RV &rv0 ) {<a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv</a> ( rv0 );}; |
|---|
| 184 | <a name="l00235"></a>00235 <span class="keywordtype">void</span> set_parameters ( <span class="keywordtype">int</span> dim0 ) {<a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>=dim0;} |
|---|
| 185 | <a name="l00237"></a>00237 |
|---|
| 186 | <a name="l00240"></a>00240 |
|---|
| 187 | <a name="l00242"></a><a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b">00242</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b" title="Returns a sample, from density .">sample</a> ()<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"not implemneted"</span> );<span class="keywordflow">return</span> vec ( 0 );}; |
|---|
| 188 | <a name="l00244"></a>00244 <span class="keyword">virtual</span> mat <a class="code" href="classbdm_1_1epdf.html#b4cf45fd83cc7573ede9fe1215256058" title="Returns N samples, from density .">sample_m</a> ( <span class="keywordtype">int</span> N ) <span class="keyword">const</span>; |
|---|
| 189 | <a name="l00246"></a><a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249">00246</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249" title="Compute log-probability of argument val.">evallog</a> ( <span class="keyword">const</span> vec &val )<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"not implemneted"</span> );<span class="keywordflow">return</span> 0.0;}; |
|---|
| 190 | <a name="l00248"></a><a class="code" href="classbdm_1_1epdf.html#34956d4dd3176eeb5937cf48a1546b62">00248</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#34956d4dd3176eeb5937cf48a1546b62" title="Compute log-probability of multiple values argument val.">evallog_m</a> ( <span class="keyword">const</span> mat &Val )<span class="keyword"> const </span>{ |
|---|
| 191 | <a name="l00249"></a>00249 vec x ( Val.cols() ); |
|---|
| 192 | <a name="l00250"></a>00250 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i=0;i<Val.cols();i++ ) {x ( i ) =<a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249" title="Compute log-probability of argument val.">evallog</a> ( Val.get_col ( i ) ) ;} |
|---|
| 193 | <a name="l00251"></a>00251 <span class="keywordflow">return</span> x; |
|---|
| 194 | <a name="l00252"></a>00252 } |
|---|
| 195 | <a name="l00254"></a><a class="code" href="classbdm_1_1epdf.html#e584eac5579c1b6384947ecf66166c77">00254</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a>* <a class="code" href="classbdm_1_1epdf.html#e584eac5579c1b6384947ecf66166c77" title="Return conditional density on the given RV, the remaining rvs will be in conditioning...">condition</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> )<span class="keyword"> const </span>{it_warning ( <span class="stringliteral">"Not implemented"</span> ); <span class="keywordflow">return</span> NULL;} |
|---|
| 196 | <a name="l00256"></a><a class="code" href="classbdm_1_1epdf.html#3fb2ece54f720b62ad325e61214fa0a1">00256</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* <a class="code" href="classbdm_1_1epdf.html#3fb2ece54f720b62ad325e61214fa0a1" title="Return marginal density on the given RV, the remainig rvs are intergrated out.">marginal</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> )<span class="keyword"> const </span>{it_warning ( <span class="stringliteral">"Not implemented"</span> ); <span class="keywordflow">return</span> NULL;} |
|---|
| 197 | <a name="l00258"></a><a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75">00258</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75" title="return expected value">mean</a>()<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"not implemneted"</span> );<span class="keywordflow">return</span> vec ( 0 );}; |
|---|
| 198 | <a name="l00260"></a><a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c">00260</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c" title="return expected variance (not covariance!)">variance</a>()<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"not implemneted"</span> );<span class="keywordflow">return</span> vec ( 0 );}; |
|---|
| 199 | <a name="l00262"></a><a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539">00262</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539" title="Lower and upper bounds of percentage % quantile, returns mean-2*sigma as default...">qbounds</a> ( vec &lb, vec &ub, <span class="keywordtype">double</span> percentage=0.95 )<span class="keyword"> const </span>{ |
|---|
| 200 | <a name="l00263"></a>00263 vec mea=<a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75" title="return expected value">mean</a>(); vec std=sqrt ( <a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c" title="return expected variance (not covariance!)">variance</a>() ); |
|---|
| 201 | <a name="l00264"></a>00264 lb = mea-2*std; ub=mea+2*std; |
|---|
| 202 | <a name="l00265"></a>00265 }; |
|---|
| 203 | <a name="l00267"></a>00267 |
|---|
| 204 | <a name="l00273"></a>00273 |
|---|
| 205 | <a name="l00275"></a><a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff">00275</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv0 ) {<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> = rv0; }<span class="comment">//it_assert_debug(isnamed(),""); };</span> |
|---|
| 206 | <a name="l00277"></a><a class="code" href="classbdm_1_1epdf.html#c4b863ff84c7a4882fb3ad18556027f9">00277</a> <span class="comment"></span> <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1epdf.html#c4b863ff84c7a4882fb3ad18556027f9" title="True if rv is assigned.">isnamed</a>()<span class="keyword"> const </span>{<span class="keywordtype">bool</span> b= ( <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>==<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() );<span class="keywordflow">return</span> b;} |
|---|
| 207 | <a name="l00279"></a><a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21">00279</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>()<span class="keyword"> const </span>{it_assert_debug ( <a class="code" href="classbdm_1_1epdf.html#c4b863ff84c7a4882fb3ad18556027f9" title="True if rv is assigned.">isnamed</a>(),<span class="stringliteral">""</span> ); <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>;} |
|---|
| 208 | <a name="l00281"></a>00281 |
|---|
| 209 | <a name="l00284"></a>00284 |
|---|
| 210 | <a name="l00286"></a><a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c">00286</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c" title="Size of the random variable.">dimension</a>()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>;} |
|---|
| 211 | <a name="l00288"></a>00288 |
|---|
| 212 | <a name="l00289"></a>00289 }; |
|---|
| 213 | <a name="l00290"></a>00290 |
|---|
| 214 | <a name="l00291"></a>00291 |
|---|
| 215 | <a name="l00293"></a>00293 <span class="comment">//TODO Samplecond can be generalized</span> |
|---|
| 216 | <a name="l00294"></a>00294 |
|---|
| 217 | <a name="l00295"></a><a class="code" href="classbdm_1_1mpdf.html">00295</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 218 | <a name="l00296"></a>00296 <span class="keyword">protected</span>: |
|---|
| 219 | <a name="l00298"></a><a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6">00298</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a>; |
|---|
| 220 | <a name="l00300"></a><a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288">00300</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>; |
|---|
| 221 | <a name="l00302"></a><a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0">00302</a> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>; |
|---|
| 222 | <a name="l00303"></a>00303 <span class="keyword">public</span>: |
|---|
| 223 | <a name="l00306"></a>00306 |
|---|
| 224 | <a name="l00307"></a>00307 <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> ( ) :<a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ( 0 ),<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> ( ) {}; |
|---|
| 225 | <a name="l00309"></a><a class="code" href="classbdm_1_1mpdf.html#7089fcbd918f201fdf4256119e31f173">00309</a> <a class="code" href="classbdm_1_1mpdf.html#7089fcbd918f201fdf4256119e31f173" title="copy constructor does not set pointer ep - has to be done in offsprings!">mpdf</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> &m ) :<a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ( m.<a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ),<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> ( m.<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> ) {}; |
|---|
| 226 | <a name="l00311"></a>00311 |
|---|
| 227 | <a name="l00314"></a>00314 |
|---|
| 228 | <a name="l00316"></a><a class="code" href="classbdm_1_1mpdf.html#f0c1db6fcbb3aae2dd6123884457a367">00316</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf.html#f0c1db6fcbb3aae2dd6123884457a367" title="Returns a sample from the density conditioned on cond, .">samplecond</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 229 | <a name="l00317"></a>00317 this-><a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( cond ); |
|---|
| 230 | <a name="l00318"></a>00318 vec temp= <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b" title="Returns a sample, from density .">sample</a>(); |
|---|
| 231 | <a name="l00319"></a>00319 <span class="keywordflow">return</span> temp; |
|---|
| 232 | <a name="l00320"></a>00320 }; |
|---|
| 233 | <a name="l00322"></a><a class="code" href="classbdm_1_1mpdf.html#afe4185b26baeb03688202e254d3b005">00322</a> <span class="keyword">virtual</span> mat <a class="code" href="classbdm_1_1mpdf.html#afe4185b26baeb03688202e254d3b005" title="Returns.">samplecond_m</a> ( <span class="keyword">const</span> vec &cond, <span class="keywordtype">int</span> N ) { |
|---|
| 234 | <a name="l00323"></a>00323 this-><a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( cond ); |
|---|
| 235 | <a name="l00324"></a>00324 mat temp ( <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c" title="Size of the random variable.">dimension</a>(),N ); vec smp ( <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c" title="Size of the random variable.">dimension</a>() ); |
|---|
| 236 | <a name="l00325"></a>00325 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i=0;i<N;i++ ) {smp=<a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b" title="Returns a sample, from density .">sample</a>() ;temp.set_col ( i, smp );} |
|---|
| 237 | <a name="l00326"></a>00326 <span class="keywordflow">return</span> temp; |
|---|
| 238 | <a name="l00327"></a>00327 }; |
|---|
| 239 | <a name="l00329"></a><a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530">00329</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( <span class="keyword">const</span> vec &cond ) {it_error ( <span class="stringliteral">"Not implemented"</span> );}; |
|---|
| 240 | <a name="l00330"></a>00330 |
|---|
| 241 | <a name="l00332"></a><a class="code" href="classbdm_1_1mpdf.html#6336a8a72462e2a56a3989a220f18b1b">00332</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1mpdf.html#6336a8a72462e2a56a3989a220f18b1b" title="Shortcut for conditioning and evaluation of the internal epdf. In some cases, this...">evallogcond</a> ( <span class="keyword">const</span> vec &dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 242 | <a name="l00333"></a>00333 <span class="keywordtype">double</span> tmp; this-><a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( cond );tmp = <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249" title="Compute log-probability of argument val.">evallog</a> ( dt ); it_assert_debug ( std::isfinite ( tmp ),<span class="stringliteral">"Infinite value"</span> ); <span class="keywordflow">return</span> tmp; |
|---|
| 243 | <a name="l00334"></a>00334 }; |
|---|
| 244 | <a name="l00335"></a>00335 |
|---|
| 245 | <a name="l00337"></a><a class="code" href="classbdm_1_1mpdf.html#0b0ed1ed663071bb7cf4a1349eb94fcb">00337</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf.html#0b0ed1ed663071bb7cf4a1349eb94fcb" title="Matrix version of evallogcond.">evallogcond_m</a> ( <span class="keyword">const</span> mat &Dt, <span class="keyword">const</span> vec &cond ) {this-><a class="code" href="classbdm_1_1mpdf.html#db94784a9aacf74c65c5a014f6743530" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( cond );<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#34956d4dd3176eeb5937cf48a1546b62" title="Compute log-probability of multiple values argument val.">evallog_m</a> ( Dt );}; |
|---|
| 246 | <a name="l00338"></a>00338 |
|---|
| 247 | <a name="l00341"></a>00341 |
|---|
| 248 | <a name="l00342"></a>00342 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> _rv() {<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>-><a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>();} |
|---|
| 249 | <a name="l00343"></a>00343 RV _rvc() {it_assert_debug ( isnamed(),<span class="stringliteral">""</span> ); <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>;} |
|---|
| 250 | <a name="l00344"></a>00344 <span class="keywordtype">int</span> dimension() {<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>->dimension();} |
|---|
| 251 | <a name="l00345"></a>00345 <span class="keywordtype">int</span> dimensionc() {<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a>;} |
|---|
| 252 | <a name="l00346"></a>00346 epdf& _epdf() {<span class="keywordflow">return</span> *<a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>;} |
|---|
| 253 | <a name="l00347"></a>00347 epdf* _e() {<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>;} |
|---|
| 254 | <a name="l00349"></a>00349 |
|---|
| 255 | <a name="l00352"></a>00352 <span class="keywordtype">void</span> set_rvc ( <span class="keyword">const</span> RV &rvc0 ) {<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>=rvc0;} |
|---|
| 256 | <a name="l00353"></a>00353 <span class="keywordtype">void</span> set_rv ( <span class="keyword">const</span> RV &rv0 ) {<a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>->set_rv ( rv0 );} |
|---|
| 257 | <a name="l00354"></a>00354 <span class="keywordtype">bool</span> isnamed() {<span class="keywordflow">return</span> ( <a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>->isnamed() ) && ( <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a>==<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>._dsize() );} |
|---|
| 258 | <a name="l00356"></a>00356 }; |
|---|
| 259 | <a name="l00357"></a>00357 |
|---|
| 260 | <a name="l00383"></a><a class="code" href="classbdm_1_1datalink.html">00383</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> { |
|---|
| 261 | <a name="l00384"></a>00384 <span class="keyword">protected</span>: |
|---|
| 262 | <a name="l00386"></a><a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c">00386</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>; |
|---|
| 263 | <a name="l00388"></a><a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045">00388</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>; |
|---|
| 264 | <a name="l00390"></a><a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb">00390</a> ivec <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>; |
|---|
| 265 | <a name="l00391"></a>00391 <span class="keyword">public</span>: |
|---|
| 266 | <a name="l00393"></a><a class="code" href="classbdm_1_1datalink.html#b8b5d5074fc1310a37c3713d58b900e2">00393</a> <a class="code" href="classbdm_1_1datalink.html#b8b5d5074fc1310a37c3713d58b900e2" title="Constructor.">datalink</a> () {}; |
|---|
| 267 | <a name="l00394"></a>00394 <a class="code" href="classbdm_1_1datalink.html#b8b5d5074fc1310a37c3713d58b900e2" title="Constructor.">datalink</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ) {<a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rv,rv_up );}; |
|---|
| 268 | <a name="l00396"></a><a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67">00396</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ) { |
|---|
| 269 | <a name="l00397"></a>00397 <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> = rv.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(); |
|---|
| 270 | <a name="l00398"></a>00398 <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> = rv_up.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(); |
|---|
| 271 | <a name="l00399"></a>00399 <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>= ( rv.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55">dataind</a> ( rv_up ) ); |
|---|
| 272 | <a name="l00400"></a>00400 |
|---|
| 273 | <a name="l00401"></a>00401 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>.length() ==<a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>,<span class="stringliteral">"rv is not fully in rv_up"</span> ); |
|---|
| 274 | <a name="l00402"></a>00402 } |
|---|
| 275 | <a name="l00404"></a><a class="code" href="classbdm_1_1datalink.html#724486a37002e7a3a73366c3af9b82ad">00404</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#724486a37002e7a3a73366c3af9b82ad" title="set connection using indeces">set_connection</a> ( <span class="keywordtype">int</span> ds, <span class="keywordtype">int</span> us, <span class="keyword">const</span> ivec &upind ) { |
|---|
| 276 | <a name="l00405"></a>00405 <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> = ds; |
|---|
| 277 | <a name="l00406"></a>00406 <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> = us; |
|---|
| 278 | <a name="l00407"></a>00407 <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>= upind; |
|---|
| 279 | <a name="l00408"></a>00408 |
|---|
| 280 | <a name="l00409"></a>00409 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>.length() ==<a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>,<span class="stringliteral">"rv is not fully in rv_up"</span> ); |
|---|
| 281 | <a name="l00410"></a>00410 } |
|---|
| 282 | <a name="l00412"></a><a class="code" href="classbdm_1_1datalink.html#5b5368c3899eed2f670d09142c2548e5">00412</a> vec <a class="code" href="classbdm_1_1datalink.html#5b5368c3899eed2f670d09142c2548e5" title="Get val for myself from val of &quot;Up&quot;.">pushdown</a> ( <span class="keyword">const</span> vec &val_up ) { |
|---|
| 283 | <a name="l00413"></a>00413 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>==val_up.length(),<span class="stringliteral">"Wrong val_up"</span> ); |
|---|
| 284 | <a name="l00414"></a>00414 <span class="keywordflow">return</span> get_vec ( val_up,<a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a> ); |
|---|
| 285 | <a name="l00415"></a>00415 } |
|---|
| 286 | <a name="l00417"></a><a class="code" href="classbdm_1_1datalink.html#610e966f2edb1fcd6a5b28267c571793">00417</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#610e966f2edb1fcd6a5b28267c571793" title="Fill val of &quot;Up&quot; by my pieces.">pushup</a> ( vec &val_up, <span class="keyword">const</span> vec &val ) { |
|---|
| 287 | <a name="l00418"></a>00418 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>==val.length(),<span class="stringliteral">"Wrong val"</span> ); |
|---|
| 288 | <a name="l00419"></a>00419 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>==val_up.length(),<span class="stringliteral">"Wrong val_up"</span> ); |
|---|
| 289 | <a name="l00420"></a>00420 set_subvector ( val_up, <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>, val ); |
|---|
| 290 | <a name="l00421"></a>00421 } |
|---|
| 291 | <a name="l00422"></a>00422 }; |
|---|
| 292 | <a name="l00423"></a>00423 |
|---|
| 293 | <a name="l00425"></a><a class="code" href="classbdm_1_1datalink__m2e.html">00425</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__m2e.html" title="data link between">datalink_m2e</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> { |
|---|
| 294 | <a name="l00426"></a>00426 <span class="keyword">protected</span>: |
|---|
| 295 | <a name="l00428"></a><a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9">00428</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a>; |
|---|
| 296 | <a name="l00430"></a><a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783">00430</a> ivec <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indeces of the upper val">v2c_up</a>; |
|---|
| 297 | <a name="l00432"></a><a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc">00432</a> ivec <a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, ideces of the local cond">v2c_lo</a>; |
|---|
| 298 | <a name="l00433"></a>00433 |
|---|
| 299 | <a name="l00434"></a>00434 <span class="keyword">public</span>: |
|---|
| 300 | <a name="l00435"></a>00435 <a class="code" href="classbdm_1_1datalink__m2e.html" title="data link between">datalink_m2e</a>() {}; |
|---|
| 301 | <a name="l00437"></a><a class="code" href="classbdm_1_1datalink__m2e.html#add918bf877c48714cff51ee4ad989b0">00437</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__m2e.html#add918bf877c48714cff51ee4ad989b0" title="Constructor.">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ) { |
|---|
| 302 | <a name="l00438"></a>00438 <a class="code" href="classbdm_1_1datalink__m2e.html#add918bf877c48714cff51ee4ad989b0" title="Constructor.">datalink::set_connection</a> ( rv,rv_up ); |
|---|
| 303 | <a name="l00439"></a>00439 <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a>= rvc.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(); |
|---|
| 304 | <a name="l00440"></a>00440 <span class="comment">//establish v2c connection</span> |
|---|
| 305 | <a name="l00441"></a>00441 rvc.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55">dataind</a> ( rv_up, <a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, ideces of the local cond">v2c_lo</a>, <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indeces of the upper val">v2c_up</a> ); |
|---|
| 306 | <a name="l00442"></a>00442 } |
|---|
| 307 | <a name="l00444"></a><a class="code" href="classbdm_1_1datalink__m2e.html#7ba850822e3cf9a4b079afc7e7c01703">00444</a> vec <a class="code" href="classbdm_1_1datalink__m2e.html#7ba850822e3cf9a4b079afc7e7c01703" title="Construct condition.">get_cond</a> ( <span class="keyword">const</span> vec &val_up ) { |
|---|
| 308 | <a name="l00445"></a>00445 vec tmp ( <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a> ); |
|---|
| 309 | <a name="l00446"></a>00446 set_subvector ( tmp,<a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, ideces of the local cond">v2c_lo</a>,val_up ( <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indeces of the upper val">v2c_up</a> ) ); |
|---|
| 310 | <a name="l00447"></a>00447 <span class="keywordflow">return</span> tmp; |
|---|
| 311 | <a name="l00448"></a>00448 } |
|---|
| 312 | <a name="l00449"></a>00449 <span class="keywordtype">void</span> pushup_cond ( vec &val_up, <span class="keyword">const</span> vec &val, <span class="keyword">const</span> vec &cond ) { |
|---|
| 313 | <a name="l00450"></a>00450 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>==val.length(),<span class="stringliteral">"Wrong val"</span> ); |
|---|
| 314 | <a name="l00451"></a>00451 it_assert_debug ( <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>==val_up.length(),<span class="stringliteral">"Wrong val_up"</span> ); |
|---|
| 315 | <a name="l00452"></a>00452 set_subvector ( val_up, <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indeces of the upper val">v2v_up</a>, val ); |
|---|
| 316 | <a name="l00453"></a>00453 set_subvector ( val_up, <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indeces of the upper val">v2c_up</a>, cond ); |
|---|
| 317 | <a name="l00454"></a>00454 } |
|---|
| 318 | <a name="l00455"></a>00455 }; |
|---|
| 319 | <a name="l00458"></a><a class="code" href="classbdm_1_1datalink__m2m.html">00458</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__m2m.html">datalink_m2m</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink__m2e.html" title="data link between">datalink_m2e</a> { |
|---|
| 320 | <a name="l00459"></a>00459 <span class="keyword">protected</span>: |
|---|
| 321 | <a name="l00461"></a><a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d">00461</a> ivec <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indeces of the upper cond">c2c_up</a>; |
|---|
| 322 | <a name="l00463"></a><a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5">00463</a> ivec <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indeces of the local cond">c2c_lo</a>; |
|---|
| 323 | <a name="l00464"></a>00464 <span class="keyword">public</span>: |
|---|
| 324 | <a name="l00466"></a><a class="code" href="classbdm_1_1datalink__m2m.html#3baed32cb66f0e2f731032cec0a4d287">00466</a> <a class="code" href="classbdm_1_1datalink__m2m.html#3baed32cb66f0e2f731032cec0a4d287" title="Constructor.">datalink_m2m</a>() {}; |
|---|
| 325 | <a name="l00467"></a>00467 <span class="keywordtype">void</span> set_connection ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc_up ) { |
|---|
| 326 | <a name="l00468"></a>00468 <a class="code" href="classbdm_1_1datalink__m2e.html#add918bf877c48714cff51ee4ad989b0" title="Constructor.">datalink_m2e::set_connection</a> ( rv, rvc, rv_up ); |
|---|
| 327 | <a name="l00469"></a>00469 <span class="comment">//establish c2c connection</span> |
|---|
| 328 | <a name="l00470"></a>00470 rvc.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55">dataind</a> ( rvc_up, <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indeces of the local cond">c2c_lo</a>, <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indeces of the upper cond">c2c_up</a> ); |
|---|
| 329 | <a name="l00471"></a>00471 it_assert_debug ( <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indeces of the local cond">c2c_lo</a>.length() +<a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, ideces of the local cond">v2c_lo</a>.length() ==<a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a>, <span class="stringliteral">"cond is not fully given"</span> ); |
|---|
| 330 | <a name="l00472"></a>00472 } |
|---|
| 331 | <a name="l00474"></a><a class="code" href="classbdm_1_1datalink__m2m.html#911fb7fcfa80d4e31db8e0cc03141a90">00474</a> vec <a class="code" href="classbdm_1_1datalink__m2m.html#911fb7fcfa80d4e31db8e0cc03141a90" title="Get cond for myself from val and cond of &quot;Up&quot;.">get_cond</a> ( <span class="keyword">const</span> vec &val_up, <span class="keyword">const</span> vec &cond_up ) { |
|---|
| 332 | <a name="l00475"></a>00475 vec tmp ( <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a> ); |
|---|
| 333 | <a name="l00476"></a>00476 set_subvector ( tmp,<a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, ideces of the local cond">v2c_lo</a>,val_up ( <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indeces of the upper val">v2c_up</a> ) ); |
|---|
| 334 | <a name="l00477"></a>00477 set_subvector ( tmp,<a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indeces of the local cond">c2c_lo</a>,cond_up ( <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indeces of the upper cond">c2c_up</a> ) ); |
|---|
| 335 | <a name="l00478"></a>00478 <span class="keywordflow">return</span> tmp; |
|---|
| 336 | <a name="l00479"></a>00479 } |
|---|
| 337 | <a name="l00481"></a>00481 |
|---|
| 338 | <a name="l00482"></a>00482 }; |
|---|
| 339 | <a name="l00483"></a>00483 |
|---|
| 340 | <a name="l00489"></a><a class="code" href="classbdm_1_1logger.html">00489</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 341 | <a name="l00490"></a>00490 <span class="keyword">protected</span>: |
|---|
| 342 | <a name="l00492"></a><a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f">00492</a> Array<RV> <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>; |
|---|
| 343 | <a name="l00494"></a><a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02">00494</a> Array<string> <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a>; |
|---|
| 344 | <a name="l00495"></a>00495 <span class="keyword">public</span>: |
|---|
| 345 | <a name="l00497"></a><a class="code" href="classbdm_1_1logger.html#f9c2fe7db5ddbda0098a4a5bd2c29fbf">00497</a> <a class="code" href="classbdm_1_1logger.html#f9c2fe7db5ddbda0098a4a5bd2c29fbf" title="Default constructor.">logger</a> ( ) : <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a> ( 0 ),<a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a> ( 0 ) {} |
|---|
| 346 | <a name="l00498"></a>00498 |
|---|
| 347 | <a name="l00501"></a><a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">00501</a> <span class="keyword">virtual</span> <span class="keywordtype">int</span> <span class="keyword">add</span> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keywordtype">string</span> name=<span class="stringliteral">""</span> ) { |
|---|
| 348 | <a name="l00502"></a>00502 <span class="keywordtype">int</span> id; |
|---|
| 349 | <a name="l00503"></a>00503 <span class="keywordflow">if</span> ( rv.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() >0 ) { |
|---|
| 350 | <a name="l00504"></a>00504 <span class="keywordtype">id</span>=<a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>.length(); |
|---|
| 351 | <a name="l00505"></a>00505 <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a>=concat ( <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a>, name ); <span class="comment">// diff</span> |
|---|
| 352 | <a name="l00506"></a>00506 <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>.set_length ( <span class="keywordtype">id</span>+1,<span class="keyword">true</span> ); |
|---|
| 353 | <a name="l00507"></a>00507 <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a> ( <span class="keywordtype">id</span> ) = rv; |
|---|
| 354 | <a name="l00508"></a>00508 } |
|---|
| 355 | <a name="l00509"></a>00509 <span class="keywordflow">else</span> { <span class="keywordtype">id</span> =-1;} |
|---|
| 356 | <a name="l00510"></a>00510 <span class="keywordflow">return</span> id; <span class="comment">// identifier of the last entry</span> |
|---|
| 357 | <a name="l00511"></a>00511 } |
|---|
| 358 | <a name="l00512"></a>00512 |
|---|
| 359 | <a name="l00514"></a>00514 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( <span class="keywordtype">int</span> <span class="keywordtype">id</span>, <span class="keyword">const</span> vec &v ) =0; |
|---|
| 360 | <a name="l00515"></a>00515 |
|---|
| 361 | <a name="l00517"></a>00517 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#4f31c03578a7b9b30d8b1f8c338a37e8" title="Shifts storage position for another time step.">step</a>() =0; |
|---|
| 362 | <a name="l00518"></a>00518 |
|---|
| 363 | <a name="l00520"></a><a class="code" href="classbdm_1_1logger.html#0e3fc7d13e23a8f71fc7c8a5ea68559d">00520</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#0e3fc7d13e23a8f71fc7c8a5ea68559d" title="Finalize storing information.">finalize</a>() {}; |
|---|
| 364 | <a name="l00521"></a>00521 |
|---|
| 365 | <a name="l00523"></a><a class="code" href="classbdm_1_1logger.html#cd6291a73491f755dc7bc88d022eb2fc">00523</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#cd6291a73491f755dc7bc88d022eb2fc" title="Initialize the storage.">init</a>() {}; |
|---|
| 366 | <a name="l00524"></a>00524 |
|---|
| 367 | <a name="l00525"></a>00525 }; |
|---|
| 368 | <a name="l00526"></a>00526 |
|---|
| 369 | <a name="l00530"></a><a class="code" href="classbdm_1_1mepdf.html">00530</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1mepdf.html" title="Unconditional mpdf, allows using epdf in the role of mpdf.">mepdf</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> { |
|---|
| 370 | <a name="l00531"></a>00531 <span class="keyword">public</span>: |
|---|
| 371 | <a name="l00533"></a><a class="code" href="classbdm_1_1mepdf.html#8c320c7f878fb665e93aec1499ef53ff">00533</a> <a class="code" href="classbdm_1_1mepdf.html#8c320c7f878fb665e93aec1499ef53ff" title="Default constructor.">mepdf</a> ( <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* em ) :<a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> ( ) {<a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>= em ;}; |
|---|
| 372 | <a name="l00534"></a>00534 <a class="code" href="classbdm_1_1mepdf.html#8c320c7f878fb665e93aec1499ef53ff" title="Default constructor.">mepdf</a> (<span class="keyword">const</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* em ) :<a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> ( ) {<a class="code" href="classbdm_1_1mpdf.html#5eea43c56d38e4441bfb30270db949c0" title="pointer to internal epdf">ep</a>=<span class="keyword">const_cast<</span><a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>*<span class="keyword">></span>( em );}; |
|---|
| 373 | <a name="l00535"></a><a class="code" href="classbdm_1_1mepdf.html#b2b898058169e7ed9a6dc7cd4e1c147c">00535</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mepdf.html#b2b898058169e7ed9a6dc7cd4e1c147c" title="Update ep so that it represents this mpdf conditioned on rvc = cond.">condition</a> ( <span class="keyword">const</span> vec &cond ) {} |
|---|
| 374 | <a name="l00536"></a>00536 }; |
|---|
| 375 | <a name="l00537"></a>00537 |
|---|
| 376 | <a name="l00540"></a><a class="code" href="classbdm_1_1compositepdf.html">00540</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1compositepdf.html" title="Abstract composition of pdfs, will be used for specific classes this abstract class...">compositepdf</a> { |
|---|
| 377 | <a name="l00541"></a>00541 <span class="keyword">protected</span>: |
|---|
| 378 | <a name="l00543"></a><a class="code" href="classbdm_1_1compositepdf.html#7ca3cd8ed92a7154f5b9ff13b1e9d52a">00543</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1compositepdf.html#7ca3cd8ed92a7154f5b9ff13b1e9d52a" title="Number of mpdfs in the composite.">n</a>; |
|---|
| 379 | <a name="l00545"></a><a class="code" href="classbdm_1_1compositepdf.html#23faf2debc4dde10836393b8c665914a">00545</a> Array<mpdf*> <a class="code" href="classbdm_1_1compositepdf.html#23faf2debc4dde10836393b8c665914a" title="Elements of composition.">mpdfs</a>; |
|---|
| 380 | <a name="l00546"></a>00546 <span class="keyword">public</span>: |
|---|
| 381 | <a name="l00547"></a>00547 <a class="code" href="classbdm_1_1compositepdf.html" title="Abstract composition of pdfs, will be used for specific classes this abstract class...">compositepdf</a> ( Array<mpdf*> A0 ) : <a class="code" href="classbdm_1_1compositepdf.html#7ca3cd8ed92a7154f5b9ff13b1e9d52a" title="Number of mpdfs in the composite.">n</a> ( A0.length() ), <a class="code" href="classbdm_1_1compositepdf.html#23faf2debc4dde10836393b8c665914a" title="Elements of composition.">mpdfs</a> ( A0 ) {}; |
|---|
| 382 | <a name="l00549"></a>00549 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1compositepdf.html#c73d39acc4378eee6a63155c3517d3c9" title="find common rv, flag">getrv</a> ( <span class="keywordtype">bool</span> checkoverlap=<span class="keyword">false</span> ); |
|---|
| 383 | <a name="l00551"></a>00551 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1compositepdf.html#c71fc2c51f49d797e61f479f543c75ce" title="common rvc of all mpdfs is written to rvc">setrvc</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc ); |
|---|
| 384 | <a name="l00552"></a>00552 }; |
|---|
| 385 | <a name="l00553"></a>00553 |
|---|
| 386 | <a name="l00561"></a><a class="code" href="classbdm_1_1DS.html">00561</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 387 | <a name="l00562"></a>00562 <span class="keyword">protected</span>: |
|---|
| 388 | <a name="l00563"></a>00563 <span class="keywordtype">int</span> dtsize; |
|---|
| 389 | <a name="l00564"></a>00564 <span class="keywordtype">int</span> utsize; |
|---|
| 390 | <a name="l00566"></a><a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec">00566</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>; |
|---|
| 391 | <a name="l00568"></a><a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702">00568</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>; <span class="comment">//</span> |
|---|
| 392 | <a name="l00570"></a><a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867">00570</a> <span class="comment"></span> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>, L_ut; |
|---|
| 393 | <a name="l00571"></a>00571 <span class="keyword">public</span>: |
|---|
| 394 | <a name="l00573"></a><a class="code" href="classbdm_1_1DS.html#bedd82e08ae6686b4b1732a122c2201a">00573</a> <a class="code" href="classbdm_1_1DS.html#bedd82e08ae6686b4b1732a122c2201a" title="default constructors">DS</a>() :<a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> ( ),<a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a> ( ) {}; |
|---|
| 395 | <a name="l00575"></a><a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba">00575</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &dt ) {it_error ( <span class="stringliteral">"abstract class"</span> );}; |
|---|
| 396 | <a name="l00577"></a><a class="code" href="classbdm_1_1DS.html#a0bf451c7fea73ff4150ff9e83da4832">00577</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#a0bf451c7fea73ff4150ff9e83da4832" title="Returns data records at indeces.">getdata</a> ( vec &dt, <span class="keyword">const</span> ivec &indeces ) {it_error ( <span class="stringliteral">"abstract class"</span> );}; |
|---|
| 397 | <a name="l00579"></a><a class="code" href="classbdm_1_1DS.html#f5baeee8528e5e4c5c7a344b2e3f192a">00579</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#f5baeee8528e5e4c5c7a344b2e3f192a" title="Accepts action variable and schedule it for application.">write</a> ( vec &ut ) {it_error ( <span class="stringliteral">"abstract class"</span> );}; |
|---|
| 398 | <a name="l00581"></a><a class="code" href="classbdm_1_1DS.html#6bced13f84f6bf04449728817e049e1d">00581</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#6bced13f84f6bf04449728817e049e1d" title="Accepts action variables at specific indeces.">write</a> ( vec &ut, <span class="keyword">const</span> ivec &indeces ) {it_error ( <span class="stringliteral">"abstract class"</span> );}; |
|---|
| 399 | <a name="l00582"></a>00582 |
|---|
| 400 | <a name="l00584"></a>00584 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#9a14c64d881e838ddc3a5617ee8a973b" title="Moves from to , i.e. perfroms the actions and reads response of the system.">step</a>() =0; |
|---|
| 401 | <a name="l00585"></a>00585 |
|---|
| 402 | <a name="l00587"></a><a class="code" href="classbdm_1_1DS.html#3c9e417d85052396fe74c164857ee67e">00587</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#3c9e417d85052396fe74c164857ee67e" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L ) { |
|---|
| 403 | <a name="l00588"></a>00588 it_assert_debug ( dtsize==<a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(),<span class="stringliteral">""</span> ); |
|---|
| 404 | <a name="l00589"></a>00589 it_assert_debug ( utsize==<a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(),<span class="stringliteral">""</span> ); |
|---|
| 405 | <a name="l00590"></a>00590 |
|---|
| 406 | <a name="l00591"></a>00591 <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>=L.<a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">add</a> ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>,<span class="stringliteral">""</span> ); |
|---|
| 407 | <a name="l00592"></a>00592 L_ut=L.<a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">add</a> ( <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>,<span class="stringliteral">""</span> ); |
|---|
| 408 | <a name="l00593"></a>00593 } |
|---|
| 409 | <a name="l00595"></a><a class="code" href="classbdm_1_1DS.html#e03d2c93cddd5c3a03107ddd3ae999cf">00595</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#e03d2c93cddd5c3a03107ddd3ae999cf" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L ) { |
|---|
| 410 | <a name="l00596"></a>00596 vec tmp ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() +<a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() ); |
|---|
| 411 | <a name="l00597"></a>00597 <a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba" title="Returns full vector of observed data=[output, input].">getdata</a> ( tmp ); |
|---|
| 412 | <a name="l00598"></a>00598 <span class="comment">// d is first in getdata</span> |
|---|
| 413 | <a name="l00599"></a>00599 L.<a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>,tmp.left ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() ) ); |
|---|
| 414 | <a name="l00600"></a>00600 <span class="comment">// u follows after d in getdata</span> |
|---|
| 415 | <a name="l00601"></a>00601 L.<a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( L_ut,tmp.mid ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>(), <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">_dsize</a>() ) ); |
|---|
| 416 | <a name="l00602"></a>00602 } |
|---|
| 417 | <a name="l00604"></a><a class="code" href="classbdm_1_1DS.html#ed2113851294ed96abe60fc3f05aa660">00604</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#ed2113851294ed96abe60fc3f05aa660" title="access function">_drv</a>()<span class="keyword"> const </span>{<span class="keywordflow">return</span> concat ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>,<a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a> );} |
|---|
| 418 | <a name="l00606"></a><a class="code" href="classbdm_1_1DS.html#a6a9a375da64c82fc227bda3418a1f33">00606</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1DS.html#a6a9a375da64c82fc227bda3418a1f33" title="access function">_urv</a>()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>;} |
|---|
| 419 | <a name="l00607"></a>00607 }; |
|---|
| 420 | <a name="l00608"></a>00608 |
|---|
| 421 | <a name="l00630"></a><a class="code" href="classbdm_1_1BM.html">00630</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> :<span class="keyword">public</span> <a class="code" href="classbdm_1_1bdmroot.html" title="Root class of BDM objects.">bdmroot</a> { |
|---|
| 422 | <a name="l00631"></a>00631 <span class="keyword">protected</span>: |
|---|
| 423 | <a name="l00633"></a><a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed">00633</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a>; |
|---|
| 424 | <a name="l00635"></a><a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a">00635</a> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a>; |
|---|
| 425 | <a name="l00637"></a><a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee">00637</a> <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a>; |
|---|
| 426 | <a name="l00638"></a>00638 <span class="keyword">public</span>: |
|---|
| 427 | <a name="l00641"></a>00641 |
|---|
| 428 | <a name="l00642"></a>00642 <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> () :<a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ( 0 ),<a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ( true ), <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 3 ), <a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77" title="Option for logging bounds.">opt_L_bounds</a> ( false ) {}; |
|---|
| 429 | <a name="l00643"></a>00643 <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> &B ) : <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a> ( B.<a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a> ), <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ( B.<a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ), <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ( B.<a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ) {} |
|---|
| 430 | <a name="l00646"></a><a class="code" href="classbdm_1_1BM.html#40f01563651c1e4fe926189e41a6b8ab">00646</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a>* <a class="code" href="classbdm_1_1BM.html#40f01563651c1e4fe926189e41a6b8ab">_copy_</a> ()<span class="keyword"> const </span>{<span class="keywordflow">return</span> NULL;}; |
|---|
| 431 | <a name="l00648"></a>00648 |
|---|
| 432 | <a name="l00651"></a>00651 |
|---|
| 433 | <a name="l00655"></a>00655 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#60b1779a577367c369a932cabd3a6188" title="Incremental Bayes rule.">bayes</a> ( <span class="keyword">const</span> vec &dt ) = 0; |
|---|
| 434 | <a name="l00657"></a>00657 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#1dee3fddaf021e62d925289660a707dc" title="Batch Bayes rule (columns of Dt are observations).">bayesB</a> ( <span class="keyword">const</span> mat &Dt ); |
|---|
| 435 | <a name="l00660"></a><a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">00660</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">logpred</a> ( <span class="keyword">const</span> vec &dt )<span class="keyword"> const</span>{it_error ( <span class="stringliteral">"Not implemented"</span> );<span class="keywordflow">return</span> 0.0;} |
|---|
| 436 | <a name="l00662"></a><a class="code" href="classbdm_1_1BM.html#0e8ebe61fb14990abe1254bd3dda5fae">00662</a> vec <a class="code" href="classbdm_1_1BM.html#0e8ebe61fb14990abe1254bd3dda5fae" title="Matrix version of logpred.">logpred_m</a> ( <span class="keyword">const</span> mat &dt )<span class="keyword"> const</span>{vec tmp ( dt.cols() );<span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i=0;i<dt.cols();i++ ) {tmp ( i ) =<a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">logpred</a> ( dt.get_col ( i ) );}<span class="keywordflow">return</span> tmp;} |
|---|
| 437 | <a name="l00663"></a>00663 |
|---|
| 438 | <a name="l00665"></a><a class="code" href="classbdm_1_1BM.html#688d7a2aced1e06aa1c468d73a9e5eba">00665</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* <a class="code" href="classbdm_1_1BM.html#688d7a2aced1e06aa1c468d73a9e5eba" title="Constructs a predictive density .">epredictor</a> ( )<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"Not implemented"</span> );<span class="keywordflow">return</span> NULL;}; |
|---|
| 439 | <a name="l00667"></a><a class="code" href="classbdm_1_1BM.html#598b25e3f3d96a5bc00a5faeb5b3c912">00667</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a>* <a class="code" href="classbdm_1_1BM.html#598b25e3f3d96a5bc00a5faeb5b3c912" title="Constructs a conditional density 1-step ahead predictor.">predictor</a> ( )<span class="keyword"> const </span>{it_error ( <span class="stringliteral">"Not implemented"</span> );<span class="keywordflow">return</span> NULL;}; |
|---|
| 440 | <a name="l00669"></a>00669 |
|---|
| 441 | <a name="l00674"></a>00674 |
|---|
| 442 | <a name="l00676"></a><a class="code" href="classbdm_1_1BM.html#de95c590d650b2db423d53992f0906cb">00676</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> rvc; |
|---|
| 443 | <a name="l00678"></a><a class="code" href="classbdm_1_1BM.html#b5e8e016be16e4029c789063cb3f3b33">00678</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1BM.html#b5e8e016be16e4029c789063cb3f3b33" title="access function">_rvc</a>()<span class="keyword"> const </span>{<span class="keywordflow">return</span> rvc;} |
|---|
| 444 | <a name="l00679"></a>00679 |
|---|
| 445 | <a name="l00681"></a><a class="code" href="classbdm_1_1BM.html#6799f4b16a6a59ed58b1d0d6e17116f4">00681</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#6799f4b16a6a59ed58b1d0d6e17116f4" title="Substitute val for rvc.">condition</a> ( <span class="keyword">const</span> vec &val ) {it_error ( <span class="stringliteral">"Not implemented!"</span> );}; |
|---|
| 446 | <a name="l00682"></a>00682 |
|---|
| 447 | <a name="l00684"></a>00684 |
|---|
| 448 | <a name="l00685"></a>00685 |
|---|
| 449 | <a name="l00688"></a>00688 |
|---|
| 450 | <a name="l00689"></a>00689 <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& _drv()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a>;} |
|---|
| 451 | <a name="l00690"></a>00690 <span class="keywordtype">void</span> set_drv ( <span class="keyword">const</span> RV &rv ) {<a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a>=rv;} |
|---|
| 452 | <a name="l00691"></a>00691 <span class="keywordtype">void</span> set_rv ( <span class="keyword">const</span> RV &rv ) {<span class="keyword">const_cast<</span>epdf&<span class="keyword">></span> ( posterior() ).set_rv ( rv );} |
|---|
| 453 | <a name="l00692"></a>00692 <span class="keywordtype">double</span> _ll()<span class="keyword"> const </span>{<span class="keywordflow">return</span> <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a>;} |
|---|
| 454 | <a name="l00693"></a>00693 <span class="keywordtype">void</span> set_evalll ( <span class="keywordtype">bool</span> evl0 ) {<a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a>=evl0;} |
|---|
| 455 | <a name="l00694"></a>00694 <span class="keyword">virtual</span> <span class="keyword">const</span> epdf& posterior() <span class="keyword">const</span> =0; |
|---|
| 456 | <a name="l00695"></a>00695 <span class="keyword">virtual</span> <span class="keyword">const</span> epdf* _e() <span class="keyword">const</span> =0; |
|---|
| 457 | <a name="l00697"></a>00697 |
|---|
| 458 | <a name="l00700"></a>00700 |
|---|
| 459 | <a name="l00702"></a><a class="code" href="classbdm_1_1BM.html#224dd68a83c1472b43163763fa93c477">00702</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#224dd68a83c1472b43163763fa93c477" title="Set boolean options from a string.">set_options</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &opt ) { |
|---|
| 460 | <a name="l00703"></a>00703 <a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77" title="Option for logging bounds.">opt_L_bounds</a>= ( opt.find ( <span class="stringliteral">"logbounds"</span> ) !=string::npos ); |
|---|
| 461 | <a name="l00704"></a>00704 } |
|---|
| 462 | <a name="l00706"></a><a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca">00706</a> ivec <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a>; |
|---|
| 463 | <a name="l00707"></a>00707 |
|---|
| 464 | <a name="l00709"></a><a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77">00709</a> <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77" title="Option for logging bounds.">opt_L_bounds</a>; |
|---|
| 465 | <a name="l00711"></a><a class="code" href="classbdm_1_1BM.html#aa5d1f7e638db229403e3917bf155ee3">00711</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#aa5d1f7e638db229403e3917bf155ee3" title="Add all logged variables to a logger.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> *L, <span class="keyword">const</span> <span class="keywordtype">string</span> &name=<span class="stringliteral">""</span> ) { |
|---|
| 466 | <a name="l00712"></a>00712 <span class="comment">// internal</span> |
|---|
| 467 | <a name="l00713"></a>00713 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> r; |
|---|
| 468 | <a name="l00714"></a>00714 <span class="keywordflow">if</span> ( posterior().isnamed() ) {r=posterior().<a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>();} |
|---|
| 469 | <a name="l00715"></a>00715 <span class="keywordflow">else</span>{r=<a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">"est"</span>, posterior().dimension() );}; |
|---|
| 470 | <a name="l00716"></a>00716 |
|---|
| 471 | <a name="l00717"></a>00717 <span class="comment">// Add mean value</span> |
|---|
| 472 | <a name="l00718"></a>00718 <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 0 ) =L-><a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">add</a> ( r,name ); |
|---|
| 473 | <a name="l00719"></a>00719 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77" title="Option for logging bounds.">opt_L_bounds</a> ) { |
|---|
| 474 | <a name="l00720"></a>00720 <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 1 ) =L-><a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">add</a> ( r,name+<span class="stringliteral">"_lb"</span> ); |
|---|
| 475 | <a name="l00721"></a>00721 <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 2 ) =L-><a class="code" href="classbdm_1_1logger.html#cfb4807e20b3d00f3d33e55ada528dc1">add</a> ( r,name+<span class="stringliteral">"_ub"</span> ); |
|---|
| 476 | <a name="l00722"></a>00722 } |
|---|
| 477 | <a name="l00723"></a>00723 } |
|---|
| 478 | <a name="l00724"></a>00724 <span class="keywordtype">void</span> logit ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> *L ) { |
|---|
| 479 | <a name="l00725"></a>00725 L-><a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 0 ), posterior().mean() ); |
|---|
| 480 | <a name="l00726"></a>00726 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#a5e0000d2c9df99b029eceff222f7d77" title="Option for logging bounds.">opt_L_bounds</a> ) { |
|---|
| 481 | <a name="l00727"></a>00727 vec ub,lb; |
|---|
| 482 | <a name="l00728"></a>00728 posterior().<a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539" title="Lower and upper bounds of percentage % quantile, returns mean-2*sigma as default...">qbounds</a> ( lb,ub ); |
|---|
| 483 | <a name="l00729"></a>00729 L-><a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 1 ), lb ); |
|---|
| 484 | <a name="l00730"></a>00730 L-><a class="code" href="classbdm_1_1logger.html#397c014b0aaf3581516e2a105d26a5c9" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers.">LIDs</a> ( 2 ), ub ); |
|---|
| 485 | <a name="l00731"></a>00731 } |
|---|
| 486 | <a name="l00732"></a>00732 } |
|---|
| 487 | <a name="l00734"></a>00734 }; |
|---|
| 488 | <a name="l00735"></a>00735 |
|---|
| 489 | <a name="l00736"></a>00736 }; <span class="comment">//namespace</span> |
|---|
| 490 | <a name="l00737"></a>00737 <span class="preprocessor">#endif // BM_H</span> |
|---|
| 491 | </pre></div></div> |
|---|
| 492 | <hr size="1"><address style="text-align: right;"><small>Generated on Thu Mar 19 16:25:43 2009 for mixpp by |
|---|
| 493 | <a href="http://www.doxygen.org/index.html"> |
|---|
| 494 | <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.8 </small></address> |
|---|
| 495 | </body> |
|---|
| 496 | </html> |
|---|
