| 1 | <?xml version='1.0' encoding='UTF-8' standalone='no'?> |
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| 2 | <doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.5.6"> |
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| 3 | <compounddef id="classmmix" kind="class" prot="public"> |
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| 4 | <compoundname>mmix</compoundname> |
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| 5 | <basecompoundref refid="classmpdf" prot="public" virt="non-virtual">mpdf</basecompoundref> |
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| 6 | <includes refid="emix_8h" local="no">emix.h</includes> |
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| 7 | <sectiondef kind="protected-attrib"> |
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| 8 | <memberdef kind="variable" id="classmmix_1460632c7a0afd41b7840902181a7d85f" prot="protected" static="no" mutable="no"> |
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| 9 | <type>Array< <ref refid="classmpdf" kindref="compound">mpdf</ref> * ></type> |
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| 10 | <definition>Array<mpdf*> mmix::Coms</definition> |
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| 11 | <argsstring></argsstring> |
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| 12 | <name>Coms</name> |
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| 13 | <briefdescription> |
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| 14 | <para>Component (epdfs). </para> </briefdescription> |
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| 15 | <detaileddescription> |
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| 16 | </detaileddescription> |
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| 17 | <inbodydescription> |
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| 18 | </inbodydescription> |
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| 19 | <location file="/home/smidl/work/git/mixpp/bdm/stat/emix.h" line="173" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/emix.h" bodystart="173" bodyend="-1"/> |
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| 20 | <referencedby refid="classmmix_11a66629ec5c2b6f4740606cf737f0193" compoundref="emix_8h" startline="189" endline="191">condition</referencedby> |
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| 21 | <referencedby refid="classmmix_1e7681490a5c5b2d0a43f4e5842e10a9d" compoundref="emix_8h" startline="180" endline="187">set_parameters</referencedby> |
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| 22 | </memberdef> |
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| 23 | <memberdef kind="variable" id="classmmix_1507a5e6df53e6e9a6a330f1271cf0914" prot="protected" static="no" mutable="no"> |
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| 24 | <type><ref refid="classemix" kindref="compound">emix</ref></type> |
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| 25 | <definition>emix mmix::Epdf</definition> |
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| 26 | <argsstring></argsstring> |
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| 27 | <name>Epdf</name> |
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| 28 | <briefdescription> |
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| 29 | <para>Internal <ref refid="classepdf" kindref="compound">epdf</ref>. </para> </briefdescription> |
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| 30 | <detaileddescription> |
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| 31 | </detaileddescription> |
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| 32 | <inbodydescription> |
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| 33 | </inbodydescription> |
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| 34 | <location file="/home/smidl/work/git/mixpp/bdm/stat/emix.h" line="175" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/emix.h" bodystart="175" bodyend="-1"/> |
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| 35 | <referencedby refid="classmmix_16769a962f1f4d0ecc5b903b5f7d26ad3" compoundref="emix_8h" startline="178" endline="178">mmix</referencedby> |
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| 36 | <referencedby refid="classmmix_1e7681490a5c5b2d0a43f4e5842e10a9d" compoundref="emix_8h" startline="180" endline="187">set_parameters</referencedby> |
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| 37 | </memberdef> |
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| 38 | <memberdef kind="variable" id="classmpdf_1f6687c07ff07d47812dd565368ca59eb" prot="protected" static="no" mutable="no"> |
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| 39 | <type><ref refid="classRV" kindref="compound">RV</ref></type> |
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| 40 | <definition>RV mpdf::rv</definition> |
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| 41 | <argsstring></argsstring> |
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| 42 | <name>rv</name> |
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| 43 | <briefdescription> |
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| 44 | <para>modeled random variable </para> </briefdescription> |
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| 45 | <detaileddescription> |
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| 46 | </detaileddescription> |
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| 47 | <inbodydescription> |
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| 48 | </inbodydescription> |
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| 49 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="174" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="174" bodyend="-1"/> |
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| 50 | <referencedby refid="classmpdf_11e71ad4c66d5884c82d4a3b06b42fe32" compoundref="libBM_8h" startline="208" endline="208">mpdf::_rv</referencedby> |
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| 51 | <referencedby refid="classmprod_1419b303581a91ad85200bdcb4b3186f4" compoundref="emix_8h" startline="90" endline="115">mprod::mprod</referencedby> |
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| 52 | <referencedby refid="classmlnorm_1215fb88cc8b95d64cdefd6849abdd1e8" compoundref="libEF_8h" startline="430" endline="444">mlnorm< sq_T >::samplecond</referencedby> |
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| 53 | <referencedby refid="classmpdf_10e37163660f93df2a4d723cedb1da89c" compoundref="libBM_8h" startline="188" endline="193">mpdf::samplecond</referencedby> |
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| 54 | <referencedby refid="classmlnorm_1b6749030c5d5abcb3eb6898f74cea3c0" compoundref="libEF_8h" startline="416" endline="419">mlnorm< sq_T >::set_parameters</referencedby> |
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| 55 | <referencedby refid="classmgamma_1a9d646cf758a70126dde7c48790b6e94" compoundref="libEF_8cpp" startline="108" endline="112">mgamma::set_parameters</referencedby> |
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| 56 | </memberdef> |
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| 57 | <memberdef kind="variable" id="classmpdf_1acb7dda792b3cd5576f39fa3129abbab" prot="protected" static="no" mutable="no"> |
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| 58 | <type><ref refid="classRV" kindref="compound">RV</ref></type> |
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| 59 | <definition>RV mpdf::rvc</definition> |
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| 60 | <argsstring></argsstring> |
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| 61 | <name>rvc</name> |
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| 62 | <briefdescription> |
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| 63 | <para>random variable in condition </para> </briefdescription> |
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| 64 | <detaileddescription> |
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| 65 | </detaileddescription> |
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| 66 | <inbodydescription> |
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| 67 | </inbodydescription> |
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| 68 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="176" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="176" bodyend="-1"/> |
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| 69 | <referencedby refid="classmpdf_1ec9c850305984582548e8deb64f0ffe8" compoundref="libBM_8h" startline="206" endline="206">mpdf::_rvc</referencedby> |
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| 70 | <referencedby refid="classmprod_1419b303581a91ad85200bdcb4b3186f4" compoundref="emix_8h" startline="90" endline="115">mprod::mprod</referencedby> |
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| 71 | </memberdef> |
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| 72 | <memberdef kind="variable" id="classmpdf_17aa894208a32f3487827df6d5054424c" prot="protected" static="no" mutable="no"> |
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| 73 | <type><ref refid="classepdf" kindref="compound">epdf</ref> *</type> |
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| 74 | <definition>epdf* mpdf::ep</definition> |
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| 75 | <argsstring></argsstring> |
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| 76 | <name>ep</name> |
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| 77 | <briefdescription> |
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| 78 | <para>pointer to internal <ref refid="classepdf" kindref="compound">epdf</ref> </para> </briefdescription> |
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| 79 | <detaileddescription> |
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| 80 | </detaileddescription> |
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| 81 | <inbodydescription> |
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| 82 | </inbodydescription> |
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| 83 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="178" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="178" bodyend="-1"/> |
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| 84 | <referencedby refid="classmpdf_1e17780ee5b2cfe05922a6c56af1462f8" compoundref="libBM_8h" startline="210" endline="210">mpdf::_epdf</referencedby> |
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| 85 | <referencedby refid="classmpdf_180b738ece5bd4f8c4edaee4b38906f91" compoundref="libBM_8h" startline="198" endline="198">mpdf::evalcond</referencedby> |
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| 86 | <referencedby refid="classmepdf_17ab1c50f0aa16230117436dee500f2e0" compoundref="libBM_8h" startline="220" endline="220">mepdf::mepdf</referencedby> |
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| 87 | <referencedby refid="classmlnorm_1f927203b3f31171c5c10ffc7caa797f5" compoundref="libEF_8h" startline="412" endline="413">mlnorm< sq_T >::mlnorm</referencedby> |
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| 88 | <referencedby refid="classmmix_16769a962f1f4d0ecc5b903b5f7d26ad3" compoundref="emix_8h" startline="178" endline="178">mmix</referencedby> |
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| 89 | <referencedby refid="classmpdf_13f172b79ec4a5ebc87898a5381141f1b" compoundref="libBM_8h" startline="184" endline="186">mpdf::samplecond</referencedby> |
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| 90 | <referencedby refid="classmgamma_1a9d646cf758a70126dde7c48790b6e94" compoundref="libEF_8cpp" startline="108" endline="112">mgamma::set_parameters</referencedby> |
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| 91 | </memberdef> |
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| 92 | </sectiondef> |
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| 93 | <sectiondef kind="public-func"> |
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| 94 | <memberdef kind="function" id="classmmix_16769a962f1f4d0ecc5b903b5f7d26ad3" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual"> |
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| 95 | <type></type> |
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| 96 | <definition>mmix::mmix</definition> |
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| 97 | <argsstring>(RV &rv, RV &rvc)</argsstring> |
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| 98 | <name>mmix</name> |
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| 99 | <param> |
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| 100 | <type><ref refid="classRV" kindref="compound">RV</ref> &</type> |
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| 101 | <declname>rv</declname> |
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| 102 | </param> |
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| 103 | <param> |
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| 104 | <type><ref refid="classRV" kindref="compound">RV</ref> &</type> |
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| 105 | <declname>rvc</declname> |
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| 106 | </param> |
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| 107 | <briefdescription> |
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| 108 | <para>Default constructor. </para> </briefdescription> |
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| 109 | <detaileddescription> |
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| 110 | </detaileddescription> |
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| 111 | <inbodydescription> |
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| 112 | </inbodydescription> |
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| 113 | <location file="/home/smidl/work/git/mixpp/bdm/stat/emix.h" line="178" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/emix.h" bodystart="178" bodyend="178"/> |
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| 114 | <references refid="classmpdf_17aa894208a32f3487827df6d5054424c" compoundref="libBM_8h" startline="178">mpdf::ep</references> |
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| 115 | <references refid="classmmix_1507a5e6df53e6e9a6a330f1271cf0914" compoundref="emix_8h" startline="175">Epdf</references> |
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| 116 | </memberdef> |
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| 117 | <memberdef kind="function" id="classmmix_1e7681490a5c5b2d0a43f4e5842e10a9d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual"> |
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| 118 | <type>void</type> |
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| 119 | <definition>void mmix::set_parameters</definition> |
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| 120 | <argsstring>(const vec &w, const Array< mpdf * > &Coms)</argsstring> |
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| 121 | <name>set_parameters</name> |
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| 122 | <param> |
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| 123 | <type>const vec &</type> |
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| 124 | <declname>w</declname> |
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| 125 | </param> |
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| 126 | <param> |
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| 127 | <type>const Array< <ref refid="classmpdf" kindref="compound">mpdf</ref> * > &</type> |
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| 128 | <declname>Coms</declname> |
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| 129 | </param> |
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| 130 | <briefdescription> |
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| 131 | <para>Set weights <computeroutput>w</computeroutput> and components <computeroutput>R</computeroutput>. </para> </briefdescription> |
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| 132 | <detaileddescription> |
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| 133 | </detaileddescription> |
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| 134 | <inbodydescription> |
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| 135 | </inbodydescription> |
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| 136 | <location file="/home/smidl/work/git/mixpp/bdm/stat/emix.h" line="180" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/emix.h" bodystart="180" bodyend="187"/> |
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| 137 | <references refid="classmmix_1460632c7a0afd41b7840902181a7d85f" compoundref="emix_8h" startline="173">Coms</references> |
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| 138 | <references refid="classmmix_1507a5e6df53e6e9a6a330f1271cf0914" compoundref="emix_8h" startline="175">Epdf</references> |
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| 139 | <references refid="classemix_16ce82b24d7fe540ddbf44b472a005555" compoundref="emix_8cpp" startline="5" endline="12">emix::set_parameters</references> |
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| 140 | </memberdef> |
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| 141 | <memberdef kind="function" id="classmmix_11a66629ec5c2b6f4740606cf737f0193" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual"> |
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| 142 | <type>void</type> |
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| 143 | <definition>void mmix::condition</definition> |
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| 144 | <argsstring>(const vec &cond)</argsstring> |
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| 145 | <name>condition</name> |
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| 146 | <reimplements refid="classmpdf_10f95a0cc6ab40611f46804682446ed83">condition</reimplements> |
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| 147 | <param> |
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| 148 | <type>const vec &</type> |
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| 149 | <declname>cond</declname> |
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| 150 | </param> |
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| 151 | <briefdescription> |
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| 152 | <para>Update <computeroutput>ep</computeroutput> so that it represents this <ref refid="classmpdf" kindref="compound">mpdf</ref> conditioned on <computeroutput>rvc</computeroutput> = cond. </para> </briefdescription> |
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| 153 | <detaileddescription> |
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| 154 | </detaileddescription> |
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| 155 | <inbodydescription> |
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| 156 | </inbodydescription> |
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| 157 | <location file="/home/smidl/work/git/mixpp/bdm/stat/emix.h" line="189" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/emix.h" bodystart="189" bodyend="191"/> |
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| 158 | <references refid="classmmix_1460632c7a0afd41b7840902181a7d85f" compoundref="emix_8h" startline="173">Coms</references> |
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| 159 | </memberdef> |
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| 160 | <memberdef kind="function" id="classmpdf_13f172b79ec4a5ebc87898a5381141f1b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual"> |
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| 161 | <type>vec</type> |
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| 162 | <definition>virtual vec mpdf::samplecond</definition> |
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| 163 | <argsstring>(const vec &cond, double &ll)</argsstring> |
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| 164 | <name>samplecond</name> |
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| 165 | <param> |
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| 166 | <type>const vec &</type> |
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| 167 | <declname>cond</declname> |
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| 168 | </param> |
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| 169 | <param> |
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| 170 | <type>double &</type> |
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| 171 | <declname>ll</declname> |
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| 172 | </param> |
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| 173 | <briefdescription> |
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| 174 | <para>Returns the required moment of the <ref refid="classepdf" kindref="compound">epdf</ref>. </para> </briefdescription> |
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| 175 | <detaileddescription> |
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| 176 | <para>Returns a sample from the density conditioned on <computeroutput>cond</computeroutput>, <formula id="10">$x \sim epdf(rv|cond)$</formula>. <parameterlist kind="param"><parameteritem> |
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| 177 | <parameternamelist> |
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| 178 | <parametername>cond</parametername> |
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| 179 | </parameternamelist> |
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| 180 | <parameterdescription> |
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| 181 | <para>is numeric value of <computeroutput>rv</computeroutput> </para></parameterdescription> |
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| 182 | </parameteritem> |
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| 183 | <parameteritem> |
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| 184 | <parameternamelist> |
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| 185 | <parametername>ll</parametername> |
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| 186 | </parameternamelist> |
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| 187 | <parameterdescription> |
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| 188 | <para>is a return value of log-likelihood of the sample. </para></parameterdescription> |
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| 189 | </parameteritem> |
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| 190 | </parameterlist> |
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| 191 | </para> </detaileddescription> |
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| 192 | <inbodydescription> |
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| 193 | </inbodydescription> |
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| 194 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="184" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="184" bodyend="186"/> |
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| 195 | <references refid="classmpdf_10f95a0cc6ab40611f46804682446ed83" compoundref="libBM_8h" startline="195" endline="195">mpdf::condition</references> |
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| 196 | <references refid="classmpdf_17aa894208a32f3487827df6d5054424c" compoundref="libBM_8h" startline="178">mpdf::ep</references> |
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| 197 | <references refid="classepdf_16aef3eca74899692503769c18add1a4c">epdf::evalpdflog</references> |
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| 198 | <references refid="classepdf_18019654e494bf5e458f6fb947e11b262">epdf::sample</references> |
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| 199 | <referencedby refid="classMPF_155daf8e4b6553dd9f47c692de7931623" compoundref="libPF_8h" startline="137" endline="205">MPF< BM_T >::bayes</referencedby> |
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| 200 | <referencedby refid="classPF_164f636bbd63bea9efd778214e6b631d3" compoundref="libPF_8cpp" startline="7" endline="33">PF::bayes</referencedby> |
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| 201 | </memberdef> |
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| 202 | <memberdef kind="function" id="classmpdf_10e37163660f93df2a4d723cedb1da89c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual"> |
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| 203 | <type>mat</type> |
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| 204 | <definition>virtual mat mpdf::samplecond</definition> |
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| 205 | <argsstring>(const vec &cond, vec &ll, int N)</argsstring> |
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| 206 | <name>samplecond</name> |
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| 207 | <param> |
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| 208 | <type>const vec &</type> |
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| 209 | <declname>cond</declname> |
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| 210 | </param> |
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| 211 | <param> |
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| 212 | <type>vec &</type> |
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| 213 | <declname>ll</declname> |
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| 214 | </param> |
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| 215 | <param> |
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| 216 | <type>int</type> |
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| 217 | <declname>N</declname> |
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| 218 | </param> |
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| 219 | <briefdescription> |
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| 220 | <para>Returns. </para> </briefdescription> |
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| 221 | <detaileddescription> |
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| 222 | <para><parameterlist kind="param"><parameteritem> |
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| 223 | <parameternamelist> |
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| 224 | <parametername>N</parametername> |
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| 225 | </parameternamelist> |
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| 226 | <parameterdescription> |
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| 227 | <para>samples from the density conditioned on <computeroutput>cond</computeroutput>, <formula id="10">$x \sim epdf(rv|cond)$</formula>. </para></parameterdescription> |
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| 228 | </parameteritem> |
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| 229 | <parameteritem> |
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| 230 | <parameternamelist> |
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| 231 | <parametername>cond</parametername> |
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| 232 | </parameternamelist> |
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| 233 | <parameterdescription> |
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| 234 | <para>is numeric value of <computeroutput>rv</computeroutput> </para></parameterdescription> |
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| 235 | </parameteritem> |
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| 236 | <parameteritem> |
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| 237 | <parameternamelist> |
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| 238 | <parametername>ll</parametername> |
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| 239 | </parameternamelist> |
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| 240 | <parameterdescription> |
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| 241 | <para>is a return value of log-likelihood of the sample. </para></parameterdescription> |
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| 242 | </parameteritem> |
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| 243 | </parameterlist> |
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| 244 | </para> </detaileddescription> |
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| 245 | <inbodydescription> |
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| 246 | </inbodydescription> |
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| 247 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="188" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="188" bodyend="193"/> |
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| 248 | <references refid="classmpdf_10f95a0cc6ab40611f46804682446ed83" compoundref="libBM_8h" startline="195" endline="195">mpdf::condition</references> |
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| 249 | <references refid="classRV_1f5c7b8bd589eef09ccdf3329a0addea0" compoundref="libBM_8h" startline="69" endline="69">RV::count</references> |
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| 250 | <references refid="classmpdf_17aa894208a32f3487827df6d5054424c" compoundref="libBM_8h" startline="178">mpdf::ep</references> |
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| 251 | <references refid="classepdf_16aef3eca74899692503769c18add1a4c">epdf::evalpdflog</references> |
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| 252 | <references refid="classmpdf_1f6687c07ff07d47812dd565368ca59eb" compoundref="libBM_8h" startline="174">mpdf::rv</references> |
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| 253 | <references refid="classepdf_18019654e494bf5e458f6fb947e11b262">epdf::sample</references> |
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| 254 | </memberdef> |
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| 255 | <memberdef kind="function" id="classmpdf_180b738ece5bd4f8c4edaee4b38906f91" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual"> |
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| 256 | <type>double</type> |
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| 257 | <definition>virtual double mpdf::evalcond</definition> |
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| 258 | <argsstring>(const vec &dt, const vec &cond)</argsstring> |
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| 259 | <name>evalcond</name> |
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| 260 | <param> |
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| 261 | <type>const vec &</type> |
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| 262 | <declname>dt</declname> |
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| 263 | </param> |
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| 264 | <param> |
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| 265 | <type>const vec &</type> |
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| 266 | <declname>cond</declname> |
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| 267 | </param> |
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| 268 | <briefdescription> |
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| 269 | <para>Shortcut for conditioning and evaluation of the internal <ref refid="classepdf" kindref="compound">epdf</ref>. In some cases, this operation can be implemented efficiently. </para> </briefdescription> |
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| 270 | <detaileddescription> |
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| 271 | </detaileddescription> |
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| 272 | <inbodydescription> |
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| 273 | </inbodydescription> |
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| 275 | <references refid="classmpdf_10f95a0cc6ab40611f46804682446ed83" compoundref="libBM_8h" startline="195" endline="195">mpdf::condition</references> |
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| 276 | <references refid="classmpdf_17aa894208a32f3487827df6d5054424c" compoundref="libBM_8h" startline="178">mpdf::ep</references> |
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| 277 | <references refid="classepdf_13ea597362e11a0040fe7c990269d072c" compoundref="libBM_8h" startline="153" endline="153">epdf::eval</references> |
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| 278 | <referencedby refid="classPF_164f636bbd63bea9efd778214e6b631d3" compoundref="libPF_8cpp" startline="7" endline="33">PF::bayes</referencedby> |
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| 279 | </memberdef> |
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| 281 | <type><ref refid="classRV" kindref="compound">RV</ref></type> |
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| 282 | <definition>RV mpdf::_rvc</definition> |
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| 283 | <argsstring>()</argsstring> |
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| 284 | <name>_rvc</name> |
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| 285 | <briefdescription> |
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| 286 | <para>access function </para> </briefdescription> |
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| 287 | <detaileddescription> |
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| 288 | </detaileddescription> |
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| 289 | <inbodydescription> |
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| 292 | <references refid="classmpdf_1acb7dda792b3cd5576f39fa3129abbab" compoundref="libBM_8h" startline="176">mpdf::rvc</references> |
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| 293 | <referencedby refid="classmerger_11a6a721294321c2e412ca0084c636b69" compoundref="merger_8h" startline="36" endline="38">merger::merger</referencedby> |
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| 296 | <type><ref refid="classRV" kindref="compound">RV</ref></type> |
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| 297 | <definition>RV mpdf::_rv</definition> |
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| 298 | <argsstring>()</argsstring> |
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| 299 | <name>_rv</name> |
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| 300 | <briefdescription> |
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| 301 | <para>access function </para> </briefdescription> |
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| 302 | <detaileddescription> |
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| 303 | </detaileddescription> |
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| 304 | <inbodydescription> |
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| 305 | </inbodydescription> |
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| 306 | <location file="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" line="208" bodyfile="/home/smidl/work/git/mixpp/bdm/stat/libBM.h" bodystart="208" bodyend="208"/> |
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| 307 | <references refid="classmpdf_1f6687c07ff07d47812dd565368ca59eb" compoundref="libBM_8h" startline="174">mpdf::rv</references> |
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| 308 | <referencedby refid="classmprod_1419b303581a91ad85200bdcb4b3186f4" compoundref="emix_8h" startline="90" endline="115">mprod::mprod</referencedby> |
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| 311 | <type><ref refid="classepdf" kindref="compound">epdf</ref> &</type> |
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| 312 | <definition>epdf& mpdf::_epdf</definition> |
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| 313 | <argsstring>()</argsstring> |
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| 314 | <name>_epdf</name> |
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| 315 | <briefdescription> |
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| 316 | <para>access function </para> </briefdescription> |
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| 317 | <detaileddescription> |
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| 318 | </detaileddescription> |
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| 319 | <inbodydescription> |
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| 322 | <references refid="classmpdf_17aa894208a32f3487827df6d5054424c" compoundref="libBM_8h" startline="178">mpdf::ep</references> |
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| 323 | </memberdef> |
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| 326 | <para>Mixture of mpdfs with constant weights, all mpdfs are of equal type. </para> </briefdescription> |
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| 355 | <link refid="classemix"/> |
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