root/library/bdm/estim/mixtures.h @ 536

Revision 536, 4.2 kB (checked in by smidl, 15 years ago)

removal of unused functions _e() and samplecond(,) and added documentation lines

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1/*!
2  \file
3  \brief Bayesian Filtering for mixtures of exponential family (EF) members
4  \author Vaclav Smidl.
5
6  -----------------------------------
7  BDM++ - C++ library for Bayesian Decision Making under Uncertainty
8
9  Using IT++ for numerical operations
10  -----------------------------------
11*/
12
13#ifndef MIXTURES_H
14#define MIXTURES_H
15
16
17#include "../math/functions.h"
18#include "../stat/exp_family.h"
19#include "../stat/emix.h"
20
21namespace bdm {
22
23//! enum switch for internal approximation used in MixEF
24enum MixEF_METHOD { EM = 0, QB = 1};
25
26/*!
27* \brief Mixture of Exponential Family Densities
28
29An approximate estimation method for models with latent discrete variable, such as
30mixture models of the following kind:
31\f[
32f(y_t|\psi_t, \Theta) = \sum_{i=1}^{n} w_i f(y_t|\psi_t, \theta_i)
33\f]
34where  \f$\psi\f$ is a known function of past outputs, \f$w=[w_1,\ldots,w_n]\f$ are component weights, and component parameters \f$\theta_i\f$ are assumed to be mutually independent. \f$\Theta\f$ is an aggregation af all component parameters and weights, i.e. \f$\Theta = [\theta_1,\ldots,\theta_n,w]\f$.
35
36The characteristic feature of this model is that if the exact values of the latent variable were known, estimation of the parameters can be handled by a single model. For example, for the case of mixture models, posterior density for each component parameters would be a BayesianModel from Exponential Family.
37
38This class uses EM-style type algorithms for estimation of its parameters. Under this simplification, the posterior density is a product of exponential family members, hence under EM-style approximate estimation this class itself belongs to the exponential family.
39
40TODO: Extend BM to use rvc.
41*/
42class MixEF: public BMEF {
43protected:
44        //!Number of components
45        int n;
46        //! Models for Components of \f$\theta_i\f$
47        Array<BMEF*> Coms;
48        //! Statistics for weights
49        multiBM weights;
50        //!Posterior on component parameters
51        eprod* est;
52        ////!Indeces of component rvc in common rvc
53
54        //! Flag for a method that is used in the inference
55        MixEF_METHOD method;
56
57        //! Auxiliary function for use in constructors
58        void build_est() {
59                est = new eprod;
60                if ( n > 0 ) {
61                        Array<const epdf*> epdfs ( n + 1 );
62                        for ( int i = 0; i < Coms.length(); i++ ) {
63//                      it_assert_debug(!x,"MixEF::MixEF : Incompatible components");
64                                epdfs ( i ) = & ( Coms ( i )->posterior() );
65                        }
66                        // last in the product is the weight
67                        epdfs ( n ) = & ( weights.posterior() );
68                        est->set_parameters ( epdfs, false );
69                }
70        }
71
72public:
73        //! Full constructor
74        MixEF ( const Array<BMEF*> &Coms0, const vec &alpha0 ) :
75                        BMEF ( ), n ( Coms0.length() ), Coms ( n ),
76                        weights (), method ( QB ) {
77                //      it_assert_debug ( n>0,"MixEF::MixEF : Empty Component list" );
78
79                for ( int i = 0; i < n; i++ ) {
80                        Coms ( i ) = ( BMEF* ) Coms0 ( i )->_copy_();
81                }
82                build_est();
83        };
84        //! Constructor of empty mixture
85        MixEF () :
86                        BMEF ( ), n ( 0 ), Coms ( 0 ),
87                        weights (), method ( QB ) {
88                build_est();
89        }
90        //! Copy constructor
91        MixEF ( const MixEF &M2 ) : BMEF ( ), n ( M2.n ), Coms ( n ),
92                        weights ( M2.weights ), method ( M2.method ) {
93                //      it_assert_debug ( n>0,"MixEF::MixEF : Empty Component list" );
94
95                for ( int i = 0; i < n; i++ ) {
96                        Coms ( i ) = M2.Coms ( i )->_copy_();
97                }
98                build_est();
99        }
100        //! Initializing the mixture by a random pick of centroids from data
101        //! \param Com0 Initial component - necessary to determine its type.
102        //! \param Data Data on which the initialization will be done
103        //! \param c Initial number of components, default=5
104        void init ( BMEF* Com0, const mat &Data, int c = 5 );
105        //Destructor
106        ~MixEF() {
107                delete est;
108                for ( int i = 0; i < n; i++ ) {
109                        delete Coms ( i );
110                }
111        }
112        //! Recursive EM-like algorithm (QB-variant), see Karny et. al, 2006
113        void bayes ( const vec &dt );
114        //! EM algorithm
115        void bayes ( const mat &dt );
116        void bayesB ( const mat &dt, const vec &wData );
117        double logpred ( const vec &dt ) const;
118        const epdf& posterior() const {
119                return *est;
120        }
121        emix* epredictor() const;
122        //! Flatten the density as if it was not estimated from the data
123        void flatten ( const BMEF* M2 );
124        //! Access function
125        BMEF* _Coms ( int i ) {
126                return Coms ( i );
127        }
128
129        //!Set which method is to be used
130        void set_method ( MixEF_METHOD M ) {
131                method = M;
132        }
133};
134
135}
136#endif // MIXTURES_H
137
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