| 1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> |
|---|
| 2 | <html><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"> |
|---|
| 3 | <title>mixpp: bdmbase.h Source File</title> |
|---|
| 4 | <link href="tabs.css" rel="stylesheet" type="text/css"> |
|---|
| 5 | <link href="doxygen.css" rel="stylesheet" type="text/css"> |
|---|
| 6 | </head><body> |
|---|
| 7 | <!-- Generated by Doxygen 1.5.9 --> |
|---|
| 8 | <script type="text/javascript"> |
|---|
| 9 | <!-- |
|---|
| 10 | function changeDisplayState (e){ |
|---|
| 11 | var num=this.id.replace(/[^[0-9]/g,''); |
|---|
| 12 | var button=this.firstChild; |
|---|
| 13 | var sectionDiv=document.getElementById('dynsection'+num); |
|---|
| 14 | if (sectionDiv.style.display=='none'||sectionDiv.style.display==''){ |
|---|
| 15 | sectionDiv.style.display='block'; |
|---|
| 16 | button.src='open.gif'; |
|---|
| 17 | }else{ |
|---|
| 18 | sectionDiv.style.display='none'; |
|---|
| 19 | button.src='closed.gif'; |
|---|
| 20 | } |
|---|
| 21 | } |
|---|
| 22 | function initDynSections(){ |
|---|
| 23 | var divs=document.getElementsByTagName('div'); |
|---|
| 24 | var sectionCounter=1; |
|---|
| 25 | for(var i=0;i<divs.length-1;i++){ |
|---|
| 26 | if(divs[i].className=='dynheader'&&divs[i+1].className=='dynsection'){ |
|---|
| 27 | var header=divs[i]; |
|---|
| 28 | var section=divs[i+1]; |
|---|
| 29 | var button=header.firstChild; |
|---|
| 30 | if (button!='IMG'){ |
|---|
| 31 | divs[i].insertBefore(document.createTextNode(' '),divs[i].firstChild); |
|---|
| 32 | button=document.createElement('img'); |
|---|
| 33 | divs[i].insertBefore(button,divs[i].firstChild); |
|---|
| 34 | } |
|---|
| 35 | header.style.cursor='pointer'; |
|---|
| 36 | header.onclick=changeDisplayState; |
|---|
| 37 | header.id='dynheader'+sectionCounter; |
|---|
| 38 | button.src='closed.gif'; |
|---|
| 39 | section.id='dynsection'+sectionCounter; |
|---|
| 40 | section.style.display='none'; |
|---|
| 41 | section.style.marginLeft='14px'; |
|---|
| 42 | sectionCounter++; |
|---|
| 43 | } |
|---|
| 44 | } |
|---|
| 45 | } |
|---|
| 46 | window.onload = initDynSections; |
|---|
| 47 | --> |
|---|
| 48 | </script> |
|---|
| 49 | <div class="navigation" id="top"> |
|---|
| 50 | <div class="tabs"> |
|---|
| 51 | <ul> |
|---|
| 52 | <li><a href="main.html"><span>Main Page</span></a></li> |
|---|
| 53 | <li><a href="pages.html"><span>Related Pages</span></a></li> |
|---|
| 54 | <li><a href="annotated.html"><span>Classes</span></a></li> |
|---|
| 55 | <li class="current"><a href="files.html"><span>Files</span></a></li> |
|---|
| 56 | </ul> |
|---|
| 57 | </div> |
|---|
| 58 | <div class="tabs"> |
|---|
| 59 | <ul> |
|---|
| 60 | <li><a href="files.html"><span>File List</span></a></li> |
|---|
| 61 | <li><a href="globals.html"><span>File Members</span></a></li> |
|---|
| 62 | </ul> |
|---|
| 63 | </div> |
|---|
| 64 | <h1>bdmbase.h</h1><a href="bdmbase_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 |
|---|
| 65 | <a name="l00013"></a>00013 <span class="preprocessor">#ifndef BDMBASE_H</span> |
|---|
| 66 | <a name="l00014"></a>00014 <span class="preprocessor"></span><span class="preprocessor">#define BDMBASE_H</span> |
|---|
| 67 | <a name="l00015"></a>00015 <span class="preprocessor"></span> |
|---|
| 68 | <a name="l00016"></a>00016 <span class="preprocessor">#include <map></span> |
|---|
| 69 | <a name="l00017"></a>00017 |
|---|
| 70 | <a name="l00018"></a>00018 <span class="preprocessor">#include "../itpp_ext.h"</span> |
|---|
| 71 | <a name="l00019"></a>00019 <span class="preprocessor">#include "../bdmroot.h"</span> |
|---|
| 72 | <a name="l00020"></a>00020 <span class="preprocessor">#include "../shared_ptr.h"</span> |
|---|
| 73 | <a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="user__info_8h.html" title="UI (user info) class for loading/saving objects from/to configuration files. It is...">user_info.h</a>"</span> |
|---|
| 74 | <a name="l00022"></a>00022 |
|---|
| 75 | <a name="l00023"></a>00023 <span class="keyword">using namespace </span>libconfig; |
|---|
| 76 | <a name="l00024"></a>00024 <span class="keyword">using namespace </span>itpp; |
|---|
| 77 | <a name="l00025"></a>00025 <span class="keyword">using namespace </span>std; |
|---|
| 78 | <a name="l00026"></a>00026 |
|---|
| 79 | <a name="l00027"></a>00027 <span class="keyword">namespace </span>bdm { |
|---|
| 80 | <a name="l00029"></a><a class="code" href="classbdm_1_1str.html">00029</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1str.html" title="Structure of RV, i.e. RVs expanded into a flat list of IDs, used for debugging.">str</a> { |
|---|
| 81 | <a name="l00030"></a>00030 <span class="keyword">public</span>: |
|---|
| 82 | <a name="l00032"></a><a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0">00032</a> ivec <a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0" title="vector id ids (non-unique!)">ids</a>; |
|---|
| 83 | <a name="l00034"></a><a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a">00034</a> ivec <a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a" title="vector of times">times</a>; |
|---|
| 84 | <a name="l00036"></a><a class="code" href="classbdm_1_1str.html#7c6b9dccc6814d7bd1e8e2208a0d3f3f">00036</a> <a class="code" href="classbdm_1_1str.html#7c6b9dccc6814d7bd1e8e2208a0d3f3f" title="Default constructor.">str</a> ( ivec ids0, ivec times0 ) : <a class="code" href="classbdm_1_1str.html#64675a73fc7324177175f19b3baeb0b0" title="vector id ids (non-unique!)">ids</a> ( ids0 ), <a class="code" href="classbdm_1_1str.html#905dc0f240e40432c103708c4a34f80a" title="vector of times">times</a> ( times0 ) { |
|---|
| 85 | <a name="l00037"></a>00037 <a class="code" href="bdmerror_8h.html#7a3399d182b8e3065532596e76f84849" title="Throw std::runtime_exception if t is not true.">bdm_assert</a> ( times0.length() == ids0.length(), <span class="stringliteral">"Incompatible input"</span> ); |
|---|
| 86 | <a name="l00038"></a>00038 }; |
|---|
| 87 | <a name="l00039"></a>00039 }; |
|---|
| 88 | <a name="l00040"></a>00040 |
|---|
| 89 | <a name="l00079"></a><a class="code" href="classbdm_1_1RV.html">00079</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 90 | <a name="l00080"></a>00080 <span class="keyword">private</span>: |
|---|
| 91 | <a name="l00081"></a>00081 <span class="keyword">typedef</span> std::map<string, int> str2int_map; |
|---|
| 92 | <a name="l00082"></a>00082 |
|---|
| 93 | <a name="l00084"></a>00084 <span class="keyword">static</span> ivec SIZES; |
|---|
| 94 | <a name="l00086"></a>00086 <span class="keyword">static</span> Array<string> NAMES; |
|---|
| 95 | <a name="l00087"></a>00087 |
|---|
| 96 | <a name="l00089"></a>00089 <span class="keyword">const</span> <span class="keyword">static</span> <span class="keywordtype">int</span> BUFFER_STEP; |
|---|
| 97 | <a name="l00090"></a>00090 |
|---|
| 98 | <a name="l00092"></a>00092 <span class="keyword">static</span> str2int_map MAP; |
|---|
| 99 | <a name="l00093"></a>00093 |
|---|
| 100 | <a name="l00094"></a>00094 <span class="keyword">public</span>: |
|---|
| 101 | <a name="l00095"></a>00095 |
|---|
| 102 | <a name="l00096"></a>00096 <span class="keyword">protected</span>: |
|---|
| 103 | <a name="l00098"></a><a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb">00098</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a>; |
|---|
| 104 | <a name="l00100"></a><a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385">00100</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a>; |
|---|
| 105 | <a name="l00102"></a><a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b">00102</a> ivec <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a>; |
|---|
| 106 | <a name="l00104"></a><a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896">00104</a> ivec <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a>; |
|---|
| 107 | <a name="l00105"></a>00105 |
|---|
| 108 | <a name="l00106"></a>00106 <span class="keyword">private</span>: |
|---|
| 109 | <a name="l00107"></a>00107 <span class="keyword">enum</span> enum_dummy {dummy}; |
|---|
| 110 | <a name="l00108"></a>00108 |
|---|
| 111 | <a name="l00110"></a>00110 <span class="keywordtype">void</span> init ( <span class="keyword">const</span> Array<std::string> &in_names, <span class="keyword">const</span> ivec &in_sizes, <span class="keyword">const</span> ivec &in_times ); |
|---|
| 112 | <a name="l00111"></a>00111 <span class="keywordtype">int</span> init ( <span class="keyword">const</span> <span class="keywordtype">string</span> &name, <span class="keywordtype">int</span> size ); |
|---|
| 113 | <a name="l00114"></a>00114 <span class="keyword">explicit</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> ( <span class="keyword">const</span> ivec &ids0, enum_dummy dum ) : <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a> ( 0 ), <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a> ( ids0.<a class="code" href="classbdm_1_1RV.html#e9ec8c3e756651ff352ab5e3d3acda4b" title="Number of named parts.">length</a>() ), <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( ids0 ), <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( zeros_i ( ids0.<a class="code" href="classbdm_1_1RV.html#e9ec8c3e756651ff352ab5e3d3acda4b" title="Number of named parts.">length</a>() ) ) { |
|---|
| 114 | <a name="l00115"></a>00115 <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a> = <a class="code" href="classbdm_1_1RV.html#39f9b44752376f07e346579b5ff8cbbd" title="Recount size of the corresponding data vector.">countsize</a>(); |
|---|
| 115 | <a name="l00116"></a>00116 } |
|---|
| 116 | <a name="l00117"></a>00117 <span class="keyword">public</span>: |
|---|
| 117 | <a name="l00120"></a>00120 |
|---|
| 118 | <a name="l00122"></a><a class="code" href="classbdm_1_1RV.html#3fa35c2744e687c74f7742990e6aa264">00122</a> <a class="code" href="classbdm_1_1RV.html#3fa35c2744e687c74f7742990e6aa264" title="Full constructor.">RV</a> ( <span class="keyword">const</span> Array<std::string> &in_names, <span class="keyword">const</span> ivec &in_sizes, <span class="keyword">const</span> ivec &in_times ) { |
|---|
| 119 | <a name="l00123"></a>00123 init ( in_names, in_sizes, in_times ); |
|---|
| 120 | <a name="l00124"></a>00124 } |
|---|
| 121 | <a name="l00125"></a>00125 |
|---|
| 122 | <a name="l00127"></a><a class="code" href="classbdm_1_1RV.html#381f5d963bb54efd4e76815dc93d50ce">00127</a> <a class="code" href="classbdm_1_1RV.html#381f5d963bb54efd4e76815dc93d50ce" title="Constructor with times=0.">RV</a> ( <span class="keyword">const</span> Array<std::string> &in_names, <span class="keyword">const</span> ivec &in_sizes ) { |
|---|
| 123 | <a name="l00128"></a>00128 init ( in_names, in_sizes, zeros_i ( in_names.length() ) ); |
|---|
| 124 | <a name="l00129"></a>00129 } |
|---|
| 125 | <a name="l00130"></a>00130 |
|---|
| 126 | <a name="l00132"></a><a class="code" href="classbdm_1_1RV.html#cb47d71d82639ec7ddf2635b21aafd00">00132</a> <a class="code" href="classbdm_1_1RV.html#cb47d71d82639ec7ddf2635b21aafd00" title="Constructor with sizes=1, times=0.">RV</a> ( <span class="keyword">const</span> Array<std::string> &in_names ) { |
|---|
| 127 | <a name="l00133"></a>00133 init ( in_names, ones_i ( in_names.length() ), zeros_i ( in_names.length() ) ); |
|---|
| 128 | <a name="l00134"></a>00134 } |
|---|
| 129 | <a name="l00135"></a>00135 |
|---|
| 130 | <a name="l00137"></a><a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412">00137</a> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a>() : <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a> ( 0 ), <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a> ( 0 ), <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( 0 ), <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( 0 ) {} |
|---|
| 131 | <a name="l00138"></a>00138 |
|---|
| 132 | <a name="l00140"></a>00140 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> ( <span class="keywordtype">string</span> name, <span class="keywordtype">int</span> sz, <span class="keywordtype">int</span> tm = 0 ); |
|---|
| 133 | <a name="l00141"></a>00141 |
|---|
| 134 | <a name="l00142"></a>00142 <span class="comment">// compiler-generated copy constructor is used</span> |
|---|
| 135 | <a name="l00144"></a>00144 <span class="comment"></span> |
|---|
| 136 | <a name="l00147"></a>00147 |
|---|
| 137 | <a name="l00149"></a>00149 <span class="keyword">friend</span> std::ostream &<a class="code" href="classbdm_1_1RV.html#cad6f15535d10437f6690cb4492176a8" title="State output, e.g. for debugging.">operator<< </a>( std::ostream &os, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv ); |
|---|
| 138 | <a name="l00150"></a>00150 |
|---|
| 139 | <a name="l00151"></a><a class="code" href="classbdm_1_1RV.html#b361a9044e6a43102c4f873b9f566a0f">00151</a> <span class="keywordtype">string</span> <a class="code" href="classbdm_1_1RV.html#b361a9044e6a43102c4f873b9f566a0f" title="This method returns a basic info about the current instance.">to_string</a>() {ostringstream o; o << <span class="keyword">this</span>; <span class="keywordflow">return</span> o.str();} |
|---|
| 140 | <a name="l00152"></a>00152 |
|---|
| 141 | <a name="l00154"></a><a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089">00154</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>()<span class="keyword"> const </span>{ |
|---|
| 142 | <a name="l00155"></a>00155 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a>; |
|---|
| 143 | <a name="l00156"></a>00156 } |
|---|
| 144 | <a name="l00157"></a>00157 |
|---|
| 145 | <a name="l00159"></a><a class="code" href="classbdm_1_1RV.html#26318eb90cb172ea86d1f45de9131c4e">00159</a> <span class="keyword">const</span> ivec& <a class="code" href="classbdm_1_1RV.html#26318eb90cb172ea86d1f45de9131c4e" title="access function">_ids</a>()<span class="keyword"> const </span>{ |
|---|
| 146 | <a name="l00160"></a>00160 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a>; |
|---|
| 147 | <a name="l00161"></a>00161 } |
|---|
| 148 | <a name="l00162"></a>00162 |
|---|
| 149 | <a name="l00164"></a>00164 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#39f9b44752376f07e346579b5ff8cbbd" title="Recount size of the corresponding data vector.">countsize</a>() <span class="keyword">const</span>; |
|---|
| 150 | <a name="l00166"></a>00166 ivec <a class="code" href="classbdm_1_1RV.html#412d43294bac38fa1804829e38fa4eaf" title="Vector of cumulative sizes of RV.">cumsizes</a>() <span class="keyword">const</span>; |
|---|
| 151 | <a name="l00168"></a><a class="code" href="classbdm_1_1RV.html#e9ec8c3e756651ff352ab5e3d3acda4b">00168</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#e9ec8c3e756651ff352ab5e3d3acda4b" title="Number of named parts.">length</a>()<span class="keyword"> const </span>{ |
|---|
| 152 | <a name="l00169"></a>00169 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#b11bfdceb831ed30d33b852dd4a6b385" title="number of individual rvs">len</a>; |
|---|
| 153 | <a name="l00170"></a>00170 } |
|---|
| 154 | <a name="l00171"></a>00171 <span class="keywordtype">int</span> id ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{ |
|---|
| 155 | <a name="l00172"></a>00172 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at ); |
|---|
| 156 | <a name="l00173"></a>00173 } |
|---|
| 157 | <a name="l00174"></a>00174 <span class="keywordtype">int</span> size ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{ |
|---|
| 158 | <a name="l00175"></a>00175 <span class="keywordflow">return</span> SIZES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at ) ); |
|---|
| 159 | <a name="l00176"></a>00176 } |
|---|
| 160 | <a name="l00177"></a>00177 <span class="keywordtype">int</span> time ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{ |
|---|
| 161 | <a name="l00178"></a>00178 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( at ); |
|---|
| 162 | <a name="l00179"></a>00179 } |
|---|
| 163 | <a name="l00180"></a>00180 std::string name ( <span class="keywordtype">int</span> at )<span class="keyword"> const </span>{ |
|---|
| 164 | <a name="l00181"></a>00181 <span class="keywordflow">return</span> NAMES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( at ) ); |
|---|
| 165 | <a name="l00182"></a>00182 } |
|---|
| 166 | <a name="l00184"></a><a class="code" href="classbdm_1_1RV.html#9bae3443ded87dc9941d763e4c48cee0">00184</a> std::string <a class="code" href="classbdm_1_1RV.html#9bae3443ded87dc9941d763e4c48cee0" title="returns name of a scalar at position scalat, i.e. it can be in the middle of vector...">scalarname</a> ( <span class="keywordtype">int</span> scalat )<span class="keyword"> const </span>{ |
|---|
| 167 | <a name="l00185"></a>00185 <a class="code" href="bdmerror_8h.html#7a3399d182b8e3065532596e76f84849" title="Throw std::runtime_exception if t is not true.">bdm_assert</a>(scalat<<a class="code" href="classbdm_1_1RV.html#0cfe477965243a89eb87a06b024e2fcb" title="size of the data vector">dsize</a>,<span class="stringliteral">"Wrong input index"</span>); |
|---|
| 168 | <a name="l00186"></a>00186 <span class="keywordtype">int</span> <span class="keywordtype">id</span>=0; |
|---|
| 169 | <a name="l00187"></a>00187 <span class="keywordtype">int</span> scalid=0; |
|---|
| 170 | <a name="l00188"></a>00188 <span class="keywordflow">while</span> (scalid+SIZES(<a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a>(<span class="keywordtype">id</span>))<=scalat) { scalid+=SIZES(<a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a>(<span class="keywordtype">id</span>)); <span class="keywordtype">id</span>++;}; |
|---|
| 171 | <a name="l00189"></a>00189 <span class="comment">//now id is the id of variable of interest</span> |
|---|
| 172 | <a name="l00190"></a>00190 <span class="keywordflow">if</span> (size(<span class="keywordtype">id</span>)==1) |
|---|
| 173 | <a name="l00191"></a>00191 <span class="keywordflow">return</span> NAMES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( <span class="keywordtype">id</span> ) ); |
|---|
| 174 | <a name="l00192"></a>00192 <span class="keywordflow">else</span> |
|---|
| 175 | <a name="l00193"></a>00193 <span class="keywordflow">return</span> NAMES ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ( <span class="keywordtype">id</span> ) )+ <span class="stringliteral">"_"</span> + num2str(scalat-scalid); |
|---|
| 176 | <a name="l00194"></a>00194 |
|---|
| 177 | <a name="l00195"></a>00195 } |
|---|
| 178 | <a name="l00196"></a>00196 <span class="keywordtype">void</span> set_time ( <span class="keywordtype">int</span> at, <span class="keywordtype">int</span> time0 ) { |
|---|
| 179 | <a name="l00197"></a>00197 <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a> ( at ) = time0; |
|---|
| 180 | <a name="l00198"></a>00198 } |
|---|
| 181 | <a name="l00200"></a>00200 |
|---|
| 182 | <a name="l00203"></a>00203 |
|---|
| 183 | <a name="l00205"></a>00205 ivec <a class="code" href="classbdm_1_1RV.html#1367055b2608ad9d50d01a2da6cec869" title="Find indices of self in another rv,.">findself</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 184 | <a name="l00207"></a>00207 ivec <a class="code" href="classbdm_1_1RV.html#a858d36d0264e1f1c89500531162fdf1" title="Find indices of self in another rv, ignore time,.">findself_ids</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 185 | <a name="l00209"></a>00209 <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1RV.html#3bb011af88ae98f5c97955bb2c95cfee" title="Compare if rv2 is identical to this RV.">equal</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 186 | <a name="l00211"></a>00211 <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1RV.html#87841b5ee43997b79789c0c22047e224" title="Add (concat) another variable to the current one,.">add</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ); |
|---|
| 187 | <a name="l00213"></a>00213 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> <a class="code" href="classbdm_1_1RV.html#aec44dabdf0a6d90fbae95e1356eda39" title="Subtract another variable from the current one.">subt</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> &rv2 ) <span class="keyword">const</span>; |
|---|
| 188 | <a name="l00215"></a>00215 <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> <a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indices ind.">subselect</a> ( <span class="keyword">const</span> ivec &ind ) <span class="keyword">const</span>; |
|---|
| 189 | <a name="l00216"></a>00216 |
|---|
| 190 | <a name="l00218"></a><a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966">00218</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966" title="Select only variables at indices ind.">operator() </a>( <span class="keyword">const</span> ivec &ind )<span class="keyword"> const </span>{ |
|---|
| 191 | <a name="l00219"></a>00219 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indices ind.">subselect</a> ( ind ); |
|---|
| 192 | <a name="l00220"></a>00220 } |
|---|
| 193 | <a name="l00221"></a>00221 |
|---|
| 194 | <a name="l00223"></a>00223 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#6f3daf0f857fff53a1c0a445fe160966" title="Select only variables at indices ind.">operator() </a>( <span class="keywordtype">int</span> di1, <span class="keywordtype">int</span> di2 ) <span class="keyword">const</span>; |
|---|
| 195 | <a name="l00224"></a>00224 |
|---|
| 196 | <a name="l00226"></a>00226 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#449c2b692957528976c189d27236e1ba" title="Shift time by delta.">t_plus</a> ( <span class="keywordtype">int</span> delta ); |
|---|
| 197 | <a name="l00228"></a>00228 |
|---|
| 198 | <a name="l00231"></a>00231 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> remove_time()<span class="keyword"> const </span>{ |
|---|
| 199 | <a name="l00232"></a>00232 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#e319ca900261a5005a9b4b353ec16412" title="Constructor of empty RV.">RV</a> ( unique ( <a class="code" href="classbdm_1_1RV.html#0a9a4769ab5a322495bea0cd8091500b" title="Vector of unique IDs.">ids</a> ), dummy ); |
|---|
| 200 | <a name="l00233"></a>00233 } |
|---|
| 201 | <a name="l00235"></a><a class="code" href="classbdm_1_1RV.html#627222f49abc5d07e5e8aecac7708ee2">00235</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#627222f49abc5d07e5e8aecac7708ee2" title="create new RV from the current one with time shifted by given value">copy_t</a>(<span class="keywordtype">int</span> dt)<span class="keyword"> const </span>{ |
|---|
| 202 | <a name="l00236"></a>00236 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> tmp=*<span class="keyword">this</span>; |
|---|
| 203 | <a name="l00237"></a>00237 tmp.<a class="code" href="classbdm_1_1RV.html#449c2b692957528976c189d27236e1ba" title="Shift time by delta.">t_plus</a>(dt); |
|---|
| 204 | <a name="l00238"></a>00238 <span class="keywordflow">return</span> tmp; |
|---|
| 205 | <a name="l00239"></a>00239 } |
|---|
| 206 | <a name="l00241"></a><a class="code" href="classbdm_1_1RV.html#c5819f71d774649412c10b8e1716be1e">00241</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1RV.html#c5819f71d774649412c10b8e1716be1e" title="return rvs with expanded delayes and sorted in the order of:">expand_delayes</a>()<span class="keyword"> const </span>{ |
|---|
| 207 | <a name="l00242"></a>00242 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> rvt = this->remove_time(); <span class="comment">//rv at t=0</span> |
|---|
| 208 | <a name="l00243"></a>00243 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> tmp = rvt; |
|---|
| 209 | <a name="l00244"></a>00244 <span class="keywordtype">int</span> td = <a class="code" href="classbdm_1_1RV.html#9a5c5aeeaf39299d07763377b05a8241" title="Minimum time-offset.">mint</a>(); |
|---|
| 210 | <a name="l00245"></a>00245 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = -1; i >= td; i-- ) { |
|---|
| 211 | <a name="l00246"></a>00246 rvt.<a class="code" href="classbdm_1_1RV.html#449c2b692957528976c189d27236e1ba" title="Shift time by delta.">t_plus</a> ( -1 ); |
|---|
| 212 | <a name="l00247"></a>00247 tmp.<a class="code" href="classbdm_1_1RV.html#87841b5ee43997b79789c0c22047e224" title="Add (concat) another variable to the current one,.">add</a> ( rvt ); <span class="comment">//shift u1</span> |
|---|
| 213 | <a name="l00248"></a>00248 } |
|---|
| 214 | <a name="l00249"></a>00249 <span class="keywordflow">return</span> tmp; |
|---|
| 215 | <a name="l00250"></a>00250 } |
|---|
| 216 | <a name="l00252"></a>00252 |
|---|
| 217 | <a name="l00255"></a>00255 |
|---|
| 218 | <a name="l00257"></a>00257 <a class="code" href="classbdm_1_1str.html" title="Structure of RV, i.e. RVs expanded into a flat list of IDs, used for debugging.">str</a> <a class="code" href="classbdm_1_1RV.html#8bdd7f4072749c7cc864b78a418ca388" title="generate str from rv, by expanding sizes">tostr</a>() <span class="keyword">const</span>; |
|---|
| 219 | <a name="l00260"></a>00260 ivec <a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &crv ) <span class="keyword">const</span>; |
|---|
| 220 | <a name="l00262"></a>00262 ivec <a class="code" href="classbdm_1_1RV.html#0c6e3a1c54a612d2ea390c841aa5eb6f" title="same as dataind but this time crv should not be complete supperset of rv.">dataind_part</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &crv ) <span class="keyword">const</span>; |
|---|
| 221 | <a name="l00265"></a>00265 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv2, ivec &selfi, ivec &rv2i ) <span class="keyword">const</span>; |
|---|
| 222 | <a name="l00267"></a><a class="code" href="classbdm_1_1RV.html#9a5c5aeeaf39299d07763377b05a8241">00267</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1RV.html#9a5c5aeeaf39299d07763377b05a8241" title="Minimum time-offset.">mint</a>()<span class="keyword"> const </span>{ |
|---|
| 223 | <a name="l00268"></a>00268 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a>.length()>0 ? min (<a class="code" href="classbdm_1_1RV.html#ef6703854820bbf61736738f1bac6896" title="Vector of shifts from current time.">times</a>) : 0; |
|---|
| 224 | <a name="l00269"></a>00269 } |
|---|
| 225 | <a name="l00271"></a>00271 |
|---|
| 226 | <a name="l00284"></a>00284 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#6564bdd36b6845a51446a192d33e1194" title="UI for class RV (description of data vectors).">from_setting</a> ( <span class="keyword">const</span> Setting &<span class="keyword">set</span> ); |
|---|
| 227 | <a name="l00285"></a>00285 |
|---|
| 228 | <a name="l00286"></a>00286 <span class="comment">// TODO dodelat void to_setting( Setting &set ) const;</span> |
|---|
| 229 | <a name="l00287"></a>00287 |
|---|
| 230 | <a name="l00289"></a>00289 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1RV.html#ab92b361335a644df654cf7cf7e5ffc0" title="Invalidate all named RVs. Use before initializing any RV instances, with care...">clear_all</a>(); |
|---|
| 231 | <a name="l00291"></a>00291 <span class="keywordtype">string</span> <a class="code" href="classbdm_1_1RV.html#0743ab524c18d0c6553b29b043fd42bd" title="function for debugging RV related stuff">show_all</a>(); |
|---|
| 232 | <a name="l00292"></a>00292 |
|---|
| 233 | <a name="l00293"></a>00293 }; |
|---|
| 234 | <a name="l00294"></a>00294 <a class="code" href="user__info_8h.html#4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( RV ); |
|---|
| 235 | <a name="l00295"></a>00295 SHAREDPTR ( RV ); |
|---|
| 236 | <a name="l00296"></a>00296 |
|---|
| 237 | <a name="l00298"></a>00298 RV concat ( <span class="keyword">const</span> RV &rv1, <span class="keyword">const</span> RV &rv2 ); |
|---|
| 238 | <a name="l00299"></a>00299 |
|---|
| 239 | <a name="l00301"></a><a class="code" href="classbdm_1_1fnc.html">00301</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1fnc.html" title="Class representing function of variable represented by rv.">fnc</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 240 | <a name="l00302"></a>00302 <span class="keyword">protected</span>: |
|---|
| 241 | <a name="l00304"></a><a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62">00304</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62" title="Length of the output vector.">dimy</a>; |
|---|
| 242 | <a name="l00305"></a>00305 <span class="keyword">public</span>: |
|---|
| 243 | <a name="l00307"></a><a class="code" href="classbdm_1_1fnc.html#65e9fb11f6cc7884018d8f229bcabbb7">00307</a> <a class="code" href="classbdm_1_1fnc.html#65e9fb11f6cc7884018d8f229bcabbb7" title="default constructor">fnc</a>() {}; |
|---|
| 244 | <a name="l00309"></a><a class="code" href="classbdm_1_1fnc.html#6277b11d7fffc7ef8a2fa3e84ae5bad4">00309</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1fnc.html#6277b11d7fffc7ef8a2fa3e84ae5bad4" title="function evaluates numerical value of at cond ">eval</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 245 | <a name="l00310"></a>00310 <span class="keywordflow">return</span> vec ( 0 ); |
|---|
| 246 | <a name="l00311"></a>00311 }; |
|---|
| 247 | <a name="l00312"></a>00312 |
|---|
| 248 | <a name="l00314"></a><a class="code" href="classbdm_1_1fnc.html#0786e40fade2663a70d654c1dda5d73e">00314</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1fnc.html#0786e40fade2663a70d654c1dda5d73e" title="function substitutes given value into an appropriate position">condition</a> ( <span class="keyword">const</span> vec &val ) {}; |
|---|
| 249 | <a name="l00315"></a>00315 |
|---|
| 250 | <a name="l00317"></a><a class="code" href="classbdm_1_1fnc.html#083832294da9d1e40804158b979c4341">00317</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1fnc.html#083832294da9d1e40804158b979c4341" title="access function">dimension</a>()<span class="keyword"> const </span>{ |
|---|
| 251 | <a name="l00318"></a>00318 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1fnc.html#52156cb4a52a62d51fc7455985797a62" title="Length of the output vector.">dimy</a>; |
|---|
| 252 | <a name="l00319"></a>00319 } |
|---|
| 253 | <a name="l00320"></a>00320 }; |
|---|
| 254 | <a name="l00321"></a>00321 |
|---|
| 255 | <a name="l00322"></a>00322 <span class="keyword">class </span>mpdf; |
|---|
| 256 | <a name="l00323"></a>00323 |
|---|
| 257 | <a name="l00325"></a>00325 |
|---|
| 258 | <a name="l00326"></a><a class="code" href="classbdm_1_1epdf.html">00326</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 259 | <a name="l00327"></a>00327 <span class="keyword">protected</span>: |
|---|
| 260 | <a name="l00329"></a><a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce">00329</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>; |
|---|
| 261 | <a name="l00331"></a><a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8">00331</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>; |
|---|
| 262 | <a name="l00332"></a>00332 |
|---|
| 263 | <a name="l00333"></a>00333 <span class="keyword">public</span>: |
|---|
| 264 | <a name="l00345"></a>00345 <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>() : <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ( 0 ), <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>() {}; |
|---|
| 265 | <a name="l00346"></a>00346 <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> &e ) : <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ( e.<a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ), <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ( e.<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ) {}; |
|---|
| 266 | <a name="l00347"></a>00347 epdf ( <span class="keyword">const</span> RV &rv0 ) : <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> ( rv0._dsize() ) { |
|---|
| 267 | <a name="l00348"></a>00348 <a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv</a> ( rv0 ); |
|---|
| 268 | <a name="l00349"></a>00349 }; |
|---|
| 269 | <a name="l00350"></a>00350 <span class="keywordtype">void</span> set_parameters ( <span class="keywordtype">int</span> dim0 ) { |
|---|
| 270 | <a name="l00351"></a>00351 <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> = dim0; |
|---|
| 271 | <a name="l00352"></a>00352 } |
|---|
| 272 | <a name="l00354"></a>00354 |
|---|
| 273 | <a name="l00357"></a>00357 |
|---|
| 274 | <a name="l00359"></a><a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b">00359</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#75ba57a89681a8efec488f5796c7cc1b" title="Returns a sample, from density .">sample</a>()<span class="keyword"> const </span>{ |
|---|
| 275 | <a name="l00360"></a>00360 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"not implemented"</span> ); |
|---|
| 276 | <a name="l00361"></a>00361 <span class="keywordflow">return</span> vec(); |
|---|
| 277 | <a name="l00362"></a>00362 } |
|---|
| 278 | <a name="l00363"></a>00363 |
|---|
| 279 | <a name="l00365"></a>00365 <span class="keyword">virtual</span> mat <a class="code" href="classbdm_1_1epdf.html#b4cf45fd83cc7573ede9fe1215256058" title="Returns N samples, from density .">sample_m</a> ( <span class="keywordtype">int</span> N ) <span class="keyword">const</span>; |
|---|
| 280 | <a name="l00366"></a>00366 |
|---|
| 281 | <a name="l00369"></a><a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249">00369</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1epdf.html#deab266d63c236c277538867d5c3f249" title="Compute log-probability of argument val In case the argument is out of suport return...">evallog</a> ( <span class="keyword">const</span> vec &val )<span class="keyword"> const </span>{ |
|---|
| 282 | <a name="l00370"></a>00370 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"not implemented"</span> ); |
|---|
| 283 | <a name="l00371"></a>00371 <span class="keywordflow">return</span> 0.0; |
|---|
| 284 | <a name="l00372"></a>00372 } |
|---|
| 285 | <a name="l00373"></a>00373 |
|---|
| 286 | <a name="l00375"></a>00375 <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#d08b68a5abd461f1b6519597e344caf8" title="Compute log-probability of multiple values argument val.">evallog_m</a> ( <span class="keyword">const</span> mat &Val ) <span class="keyword">const</span>; |
|---|
| 287 | <a name="l00376"></a>00376 |
|---|
| 288 | <a name="l00378"></a>00378 <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#d08b68a5abd461f1b6519597e344caf8" title="Compute log-probability of multiple values argument val.">evallog_m</a> ( <span class="keyword">const</span> Array<vec> &Avec ) <span class="keyword">const</span>; |
|---|
| 289 | <a name="l00379"></a>00379 |
|---|
| 290 | <a name="l00381"></a>00381 <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr<mpdf></a> <a class="code" href="classbdm_1_1epdf.html#1499d35b79bce0cfa64fc5cafb9c03b2" title="Return conditional density on the given RV, the remaining rvs will be in conditioning...">condition</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ) <span class="keyword">const</span>; |
|---|
| 291 | <a name="l00382"></a>00382 |
|---|
| 292 | <a name="l00384"></a>00384 <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr<epdf></a> <a class="code" href="classbdm_1_1epdf.html#a84b05f5293cab2aeb4e07faffa60906" title="Return marginal density on the given RV, the remainig rvs are intergrated out.">marginal</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &<a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> ) <span class="keyword">const</span>; |
|---|
| 293 | <a name="l00385"></a>00385 |
|---|
| 294 | <a name="l00387"></a><a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75">00387</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75" title="return expected value">mean</a>()<span class="keyword"> const </span>{ |
|---|
| 295 | <a name="l00388"></a>00388 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"not implemneted"</span> ); |
|---|
| 296 | <a name="l00389"></a>00389 <span class="keywordflow">return</span> vec(); |
|---|
| 297 | <a name="l00390"></a>00390 } |
|---|
| 298 | <a name="l00391"></a>00391 |
|---|
| 299 | <a name="l00393"></a><a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c">00393</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c" title="return expected variance (not covariance!)">variance</a>()<span class="keyword"> const </span>{ |
|---|
| 300 | <a name="l00394"></a>00394 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"not implemneted"</span> ); |
|---|
| 301 | <a name="l00395"></a>00395 <span class="keywordflow">return</span> vec(); |
|---|
| 302 | <a name="l00396"></a>00396 } |
|---|
| 303 | <a name="l00397"></a>00397 |
|---|
| 304 | <a name="l00399"></a><a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539">00399</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539" title="Lower and upper bounds of percentage % quantile, returns mean-2*sigma as default...">qbounds</a> ( vec &lb, vec &ub, <span class="keywordtype">double</span> percentage = 0.95 )<span class="keyword"> const </span>{ |
|---|
| 305 | <a name="l00400"></a>00400 vec mea = <a class="code" href="classbdm_1_1epdf.html#0c8d13d788094605b3cdab20a6e22b75" title="return expected value">mean</a>(); |
|---|
| 306 | <a name="l00401"></a>00401 vec std = sqrt ( <a class="code" href="classbdm_1_1epdf.html#4543d40ccfc5d549b0c831a57a3ed84c" title="return expected variance (not covariance!)">variance</a>() ); |
|---|
| 307 | <a name="l00402"></a>00402 lb = mea - 2 * std; |
|---|
| 308 | <a name="l00403"></a>00403 ub = mea + 2 * std; |
|---|
| 309 | <a name="l00404"></a>00404 }; |
|---|
| 310 | <a name="l00406"></a>00406 |
|---|
| 311 | <a name="l00412"></a>00412 |
|---|
| 312 | <a name="l00414"></a><a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff">00414</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv0 ) { |
|---|
| 313 | <a name="l00415"></a>00415 <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> = rv0; |
|---|
| 314 | <a name="l00416"></a>00416 } |
|---|
| 315 | <a name="l00417"></a>00417 |
|---|
| 316 | <a name="l00419"></a><a class="code" href="classbdm_1_1epdf.html#c4b863ff84c7a4882fb3ad18556027f9">00419</a> <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1epdf.html#c4b863ff84c7a4882fb3ad18556027f9" title="True if rv is assigned.">isnamed</a>()<span class="keyword"> const </span>{ |
|---|
| 317 | <a name="l00420"></a>00420 <span class="keywordtype">bool</span> b = ( <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a> == <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ); |
|---|
| 318 | <a name="l00421"></a>00421 <span class="keywordflow">return</span> b; |
|---|
| 319 | <a name="l00422"></a>00422 } |
|---|
| 320 | <a name="l00423"></a>00423 |
|---|
| 321 | <a name="l00425"></a><a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21">00425</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>()<span class="keyword"> const </span>{ |
|---|
| 322 | <a name="l00426"></a>00426 <span class="comment">//bdm_assert_debug ( isnamed(), "" );</span> |
|---|
| 323 | <a name="l00427"></a>00427 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1epdf.html#62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a>; |
|---|
| 324 | <a name="l00428"></a>00428 } |
|---|
| 325 | <a name="l00430"></a>00430 |
|---|
| 326 | <a name="l00433"></a>00433 |
|---|
| 327 | <a name="l00435"></a><a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c">00435</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1epdf.html#7083a65f7b7a0d0d13b2c516bd2ec29c" title="Size of the random variable.">dimension</a>()<span class="keyword"> const </span>{ |
|---|
| 328 | <a name="l00436"></a>00436 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1epdf.html#16adac20ec7fe07e1ea0b27d917788ce" title="dimension of the random variable">dim</a>; |
|---|
| 329 | <a name="l00437"></a>00437 } |
|---|
| 330 | <a name="l00445"></a><a class="code" href="classbdm_1_1epdf.html#fa9efc98a065b31c630fe18cc418f725">00445</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1epdf.html#fa9efc98a065b31c630fe18cc418f725" title="Load from structure with elements:.">from_setting</a> ( <span class="keyword">const</span> Setting &<span class="keyword">set</span> ) { |
|---|
| 331 | <a name="l00446"></a>00446 <a class="code" href="classbdm_1_1shared__ptr.html" title="A naive implementation of roughly a subset of the std::tr1::shared_ptr spec.">shared_ptr<RV></a> r = UI::build<RV> ( <span class="keyword">set</span>, <span class="stringliteral">"rv"</span>, UI::optional ); |
|---|
| 332 | <a name="l00447"></a>00447 <span class="keywordflow">if</span> ( r ) { |
|---|
| 333 | <a name="l00448"></a>00448 <a class="code" href="classbdm_1_1epdf.html#f423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv</a> ( *r ); |
|---|
| 334 | <a name="l00449"></a>00449 } |
|---|
| 335 | <a name="l00450"></a>00450 } |
|---|
| 336 | <a name="l00451"></a>00451 |
|---|
| 337 | <a name="l00452"></a>00452 }; |
|---|
| 338 | <a name="l00453"></a>00453 SHAREDPTR ( epdf ); |
|---|
| 339 | <a name="l00454"></a>00454 |
|---|
| 340 | <a name="l00456"></a><a class="code" href="classbdm_1_1mpdf.html">00456</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 341 | <a name="l00457"></a>00457 <span class="keyword">protected</span>: |
|---|
| 342 | <a name="l00459"></a><a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6">00459</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a>; |
|---|
| 343 | <a name="l00461"></a><a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288">00461</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>; |
|---|
| 344 | <a name="l00462"></a>00462 <span class="keyword">private</span>: |
|---|
| 345 | <a name="l00464"></a>00464 <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* ep; |
|---|
| 346 | <a name="l00465"></a>00465 |
|---|
| 347 | <a name="l00466"></a>00466 <span class="keyword">protected</span>: |
|---|
| 348 | <a name="l00468"></a><a class="code" href="classbdm_1_1mpdf.html#147afacb393324bb3f9a7a89e33f835e">00468</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mpdf.html#147afacb393324bb3f9a7a89e33f835e" title="set internal pointer ep to point to given iepdf ">set_ep</a> ( <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> &iepdf ) { |
|---|
| 349 | <a name="l00469"></a>00469 ep = &iepdf; |
|---|
| 350 | <a name="l00470"></a>00470 } |
|---|
| 351 | <a name="l00472"></a><a class="code" href="classbdm_1_1mpdf.html#7555b377f8b5895c9b759c9628ee3e20">00472</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mpdf.html#7555b377f8b5895c9b759c9628ee3e20" title="set internal pointer ep to point to given iepdf ">set_ep</a> ( <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> *iepdfp ) { |
|---|
| 352 | <a name="l00473"></a>00473 ep = iepdfp; |
|---|
| 353 | <a name="l00474"></a>00474 } |
|---|
| 354 | <a name="l00475"></a>00475 |
|---|
| 355 | <a name="l00476"></a>00476 <span class="keyword">public</span>: |
|---|
| 356 | <a name="l00479"></a>00479 |
|---|
| 357 | <a name="l00480"></a>00480 <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a>() : <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ( 0 ), <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>(), ep ( NULL ) { } |
|---|
| 358 | <a name="l00481"></a>00481 |
|---|
| 359 | <a name="l00482"></a>00482 mpdf ( <span class="keyword">const</span> mpdf &m ) : <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ( m.<a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> ), <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> ( m.<a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> ), ep ( m.ep ) { } |
|---|
| 360 | <a name="l00484"></a>00484 |
|---|
| 361 | <a name="l00487"></a>00487 |
|---|
| 362 | <a name="l00489"></a><a class="code" href="classbdm_1_1mpdf.html#f0c1db6fcbb3aae2dd6123884457a367">00489</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf.html#f0c1db6fcbb3aae2dd6123884457a367" title="Returns a sample from the density conditioned on cond, .">samplecond</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 363 | <a name="l00490"></a>00490 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 364 | <a name="l00491"></a>00491 <span class="keywordflow">return</span> vec(); |
|---|
| 365 | <a name="l00492"></a>00492 } |
|---|
| 366 | <a name="l00493"></a>00493 |
|---|
| 367 | <a name="l00495"></a>00495 <span class="keyword">virtual</span> mat <a class="code" href="classbdm_1_1mpdf.html#6e497d501331057309d2fddf63259d1a" title="Returns.">samplecond_m</a> ( <span class="keyword">const</span> vec &cond, <span class="keywordtype">int</span> N ); |
|---|
| 368 | <a name="l00496"></a>00496 |
|---|
| 369 | <a name="l00498"></a><a class="code" href="classbdm_1_1mpdf.html#6336a8a72462e2a56a3989a220f18b1b">00498</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1mpdf.html#6336a8a72462e2a56a3989a220f18b1b" title="Shortcut for conditioning and evaluation of the internal epdf. In some cases, this...">evallogcond</a> ( <span class="keyword">const</span> vec &dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 370 | <a name="l00499"></a>00499 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 371 | <a name="l00500"></a>00500 <span class="keywordflow">return</span> 0.0; |
|---|
| 372 | <a name="l00501"></a>00501 } |
|---|
| 373 | <a name="l00502"></a>00502 |
|---|
| 374 | <a name="l00504"></a><a class="code" href="classbdm_1_1mpdf.html#0b0ed1ed663071bb7cf4a1349eb94fcb">00504</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf.html#0b0ed1ed663071bb7cf4a1349eb94fcb" title="Matrix version of evallogcond.">evallogcond_m</a> ( <span class="keyword">const</span> mat &Dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 375 | <a name="l00505"></a>00505 vec v ( Dt.cols() ); |
|---|
| 376 | <a name="l00506"></a>00506 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = 0; i < Dt.cols(); i++ ) { |
|---|
| 377 | <a name="l00507"></a>00507 v ( i ) = <a class="code" href="classbdm_1_1mpdf.html#6336a8a72462e2a56a3989a220f18b1b" title="Shortcut for conditioning and evaluation of the internal epdf. In some cases, this...">evallogcond</a> ( Dt.get_col ( i ), cond ); |
|---|
| 378 | <a name="l00508"></a>00508 } |
|---|
| 379 | <a name="l00509"></a>00509 <span class="keywordflow">return</span> v; |
|---|
| 380 | <a name="l00510"></a>00510 } |
|---|
| 381 | <a name="l00511"></a>00511 |
|---|
| 382 | <a name="l00513"></a><a class="code" href="classbdm_1_1mpdf.html#2a0d03756f59924fd038980ee60bd904">00513</a> <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf.html#2a0d03756f59924fd038980ee60bd904" title="Array&lt;vec&gt; version of evallogcond.">evallogcond_m</a> ( <span class="keyword">const</span> Array<vec> &Dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 383 | <a name="l00514"></a>00514 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 384 | <a name="l00515"></a>00515 <span class="keywordflow">return</span> vec(); |
|---|
| 385 | <a name="l00516"></a>00516 } |
|---|
| 386 | <a name="l00517"></a>00517 |
|---|
| 387 | <a name="l00520"></a>00520 |
|---|
| 388 | <a name="l00521"></a>00521 <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& _rv()<span class="keyword"> const </span>{ |
|---|
| 389 | <a name="l00522"></a>00522 <span class="keywordflow">return</span> ep-><a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>(); |
|---|
| 390 | <a name="l00523"></a>00523 } |
|---|
| 391 | <a name="l00524"></a>00524 <span class="keyword">const</span> RV& _rvc()<span class="keyword"> const </span>{ |
|---|
| 392 | <a name="l00525"></a>00525 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>; |
|---|
| 393 | <a name="l00526"></a>00526 } |
|---|
| 394 | <a name="l00527"></a>00527 |
|---|
| 395 | <a name="l00528"></a>00528 <span class="keywordtype">int</span> dimension()<span class="keyword"> const </span>{ |
|---|
| 396 | <a name="l00529"></a>00529 <span class="keywordflow">return</span> ep->dimension(); |
|---|
| 397 | <a name="l00530"></a>00530 } |
|---|
| 398 | <a name="l00531"></a>00531 <span class="keywordtype">int</span> dimensionc() { |
|---|
| 399 | <a name="l00532"></a>00532 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a>; |
|---|
| 400 | <a name="l00533"></a>00533 } |
|---|
| 401 | <a name="l00534"></a>00534 |
|---|
| 402 | <a name="l00544"></a>00544 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mpdf.html#30a0bceb948e287d497c578e371b1667" title="Load from structure with elements:.">from_setting</a> ( <span class="keyword">const</span> Setting &<span class="keyword">set</span> ); |
|---|
| 403 | <a name="l00546"></a>00546 |
|---|
| 404 | <a name="l00549"></a>00549 <span class="keywordtype">void</span> set_rvc ( <span class="keyword">const</span> RV &rvc0 ) { |
|---|
| 405 | <a name="l00550"></a>00550 <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a> = rvc0; |
|---|
| 406 | <a name="l00551"></a>00551 } |
|---|
| 407 | <a name="l00552"></a>00552 <span class="keywordtype">void</span> set_rv ( <span class="keyword">const</span> RV &rv0 ) { |
|---|
| 408 | <a name="l00553"></a>00553 ep->set_rv ( rv0 ); |
|---|
| 409 | <a name="l00554"></a>00554 } |
|---|
| 410 | <a name="l00555"></a>00555 <span class="keywordtype">bool</span> isnamed() { |
|---|
| 411 | <a name="l00556"></a>00556 <span class="keywordflow">return</span> ( ep->isnamed() ) && ( <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> == <a class="code" href="classbdm_1_1mpdf.html#5a5f08950daa08b85b01ddf4e1c36288" title="random variable in condition">rvc</a>._dsize() ); |
|---|
| 412 | <a name="l00557"></a>00557 } |
|---|
| 413 | <a name="l00559"></a>00559 }; |
|---|
| 414 | <a name="l00560"></a>00560 SHAREDPTR ( mpdf ); |
|---|
| 415 | <a name="l00561"></a>00561 |
|---|
| 416 | <a name="l00563"></a>00563 <span class="keyword">template</span> <<span class="keyword">class</span> EPDF> |
|---|
| 417 | <a name="l00564"></a><a class="code" href="classbdm_1_1mpdf__internal.html">00564</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1mpdf__internal.html" title="Mpdf with internal epdf that is modified by function condition.">mpdf_internal</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a> { |
|---|
| 418 | <a name="l00565"></a>00565 <span class="keyword">protected</span> : |
|---|
| 419 | <a name="l00567"></a><a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468">00567</a> EPDF <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>; |
|---|
| 420 | <a name="l00568"></a>00568 <span class="keyword">public</span>: |
|---|
| 421 | <a name="l00570"></a><a class="code" href="classbdm_1_1mpdf__internal.html#e054b86262261abe0724f5890218689f">00570</a> <a class="code" href="classbdm_1_1mpdf__internal.html#e054b86262261abe0724f5890218689f" title="constructor">mpdf_internal</a>() : <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a>(), <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>() { |
|---|
| 422 | <a name="l00571"></a>00571 <a class="code" href="classbdm_1_1mpdf.html#147afacb393324bb3f9a7a89e33f835e" title="set internal pointer ep to point to given iepdf ">set_ep</a> ( <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a> ); |
|---|
| 423 | <a name="l00572"></a>00572 } |
|---|
| 424 | <a name="l00573"></a>00573 |
|---|
| 425 | <a name="l00576"></a><a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e">00576</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 426 | <a name="l00577"></a>00577 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 427 | <a name="l00578"></a>00578 } |
|---|
| 428 | <a name="l00579"></a>00579 |
|---|
| 429 | <a name="l00581"></a><a class="code" href="classbdm_1_1mpdf__internal.html#6b4d1cb8d7e230e313b4f0c905874d5a">00581</a> EPDF& <a class="code" href="classbdm_1_1mpdf__internal.html#6b4d1cb8d7e230e313b4f0c905874d5a" title="access function to iepdf">e</a>() { |
|---|
| 430 | <a name="l00582"></a>00582 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>; |
|---|
| 431 | <a name="l00583"></a>00583 } |
|---|
| 432 | <a name="l00584"></a>00584 |
|---|
| 433 | <a name="l00586"></a>00586 vec <a class="code" href="classbdm_1_1mpdf__internal.html#d8e547695d1cc19219b91164d825c930" title="Reimplements samplecond using condition().">samplecond</a> ( <span class="keyword">const</span> vec &cond ); |
|---|
| 434 | <a name="l00588"></a>00588 <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1mpdf__internal.html#89076e62b8d7df7616bad68c94591948" title="Reimplements evallogcond using condition().">evallogcond</a> ( <span class="keyword">const</span> vec &val, <span class="keyword">const</span> vec &cond ); |
|---|
| 435 | <a name="l00590"></a>00590 <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf__internal.html#e28c214e3063733a6e4d17738941c61c" title="Efficient version of evallogcond for matrices.">evallogcond_m</a> ( <span class="keyword">const</span> mat &Dt, <span class="keyword">const</span> vec &cond ); |
|---|
| 436 | <a name="l00592"></a>00592 <span class="keyword">virtual</span> vec <a class="code" href="classbdm_1_1mpdf__internal.html#e28c214e3063733a6e4d17738941c61c" title="Efficient version of evallogcond for matrices.">evallogcond_m</a> ( <span class="keyword">const</span> Array<vec> &Dt, <span class="keyword">const</span> vec &cond ); |
|---|
| 437 | <a name="l00594"></a>00594 <span class="keyword">virtual</span> mat <a class="code" href="classbdm_1_1mpdf__internal.html#9554c554054da2d22cb8e908ae9c8823" title="Efficient version of samplecond.">samplecond_m</a> ( <span class="keyword">const</span> vec &cond, <span class="keywordtype">int</span> N ); |
|---|
| 438 | <a name="l00595"></a>00595 }; |
|---|
| 439 | <a name="l00596"></a>00596 |
|---|
| 440 | <a name="l00622"></a><a class="code" href="classbdm_1_1datalink.html">00622</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> { |
|---|
| 441 | <a name="l00623"></a>00623 <span class="keyword">protected</span>: |
|---|
| 442 | <a name="l00625"></a><a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c">00625</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>; |
|---|
| 443 | <a name="l00626"></a>00626 |
|---|
| 444 | <a name="l00628"></a><a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045">00628</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>; |
|---|
| 445 | <a name="l00629"></a>00629 |
|---|
| 446 | <a name="l00631"></a><a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb">00631</a> ivec <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a>; |
|---|
| 447 | <a name="l00632"></a>00632 |
|---|
| 448 | <a name="l00633"></a>00633 <span class="keyword">public</span>: |
|---|
| 449 | <a name="l00635"></a><a class="code" href="classbdm_1_1datalink.html#b8b5d5074fc1310a37c3713d58b900e2">00635</a> <a class="code" href="classbdm_1_1datalink.html#b8b5d5074fc1310a37c3713d58b900e2" title="Constructor.">datalink</a>() : <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> ( 0 ), <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> ( 0 ) { } |
|---|
| 450 | <a name="l00636"></a>00636 |
|---|
| 451 | <a name="l00638"></a><a class="code" href="classbdm_1_1datalink.html#4016403730eb742462614d60393565cd">00638</a> <a class="code" href="classbdm_1_1datalink.html#4016403730eb742462614d60393565cd" title="Convenience constructor.">datalink</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ) { |
|---|
| 452 | <a name="l00639"></a>00639 <a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rv, rv_up ); |
|---|
| 453 | <a name="l00640"></a>00640 } |
|---|
| 454 | <a name="l00641"></a>00641 |
|---|
| 455 | <a name="l00643"></a>00643 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ); |
|---|
| 456 | <a name="l00644"></a>00644 |
|---|
| 457 | <a name="l00646"></a>00646 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#fb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( <span class="keywordtype">int</span> ds, <span class="keywordtype">int</span> us, <span class="keyword">const</span> ivec &upind ); |
|---|
| 458 | <a name="l00647"></a>00647 |
|---|
| 459 | <a name="l00649"></a><a class="code" href="classbdm_1_1datalink.html#5b5368c3899eed2f670d09142c2548e5">00649</a> vec <a class="code" href="classbdm_1_1datalink.html#5b5368c3899eed2f670d09142c2548e5" title="Get val for myself from val of &quot;Up&quot;.">pushdown</a> ( <span class="keyword">const</span> vec &val_up ) { |
|---|
| 460 | <a name="l00650"></a>00650 vec tmp ( <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> ); |
|---|
| 461 | <a name="l00651"></a>00651 <a class="code" href="classbdm_1_1datalink.html#d49a14b65969f8fa1ae8ecab7ce77d6d" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( val_up, tmp ); |
|---|
| 462 | <a name="l00652"></a>00652 <span class="keywordflow">return</span> tmp; |
|---|
| 463 | <a name="l00653"></a>00653 } |
|---|
| 464 | <a name="l00655"></a><a class="code" href="classbdm_1_1datalink.html#d49a14b65969f8fa1ae8ecab7ce77d6d">00655</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#d49a14b65969f8fa1ae8ecab7ce77d6d" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( <span class="keyword">const</span> vec &val_up, vec &val_down ) { |
|---|
| 465 | <a name="l00656"></a>00656 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> == val_up.length(), <span class="stringliteral">"Wrong val_up"</span> ); |
|---|
| 466 | <a name="l00657"></a>00657 val_down = val_up ( <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a> ); |
|---|
| 467 | <a name="l00658"></a>00658 } |
|---|
| 468 | <a name="l00660"></a><a class="code" href="classbdm_1_1datalink.html#736ec57cb8efce5f58b8f776a2d30d30">00660</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink.html#736ec57cb8efce5f58b8f776a2d30d30" title="Fill val of &quot;Up&quot; by my pieces.">pushup</a> ( vec &val_up, <span class="keyword">const</span> vec &val ) { |
|---|
| 469 | <a name="l00661"></a>00661 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> == val.length(), <span class="stringliteral">"Wrong val"</span> ); |
|---|
| 470 | <a name="l00662"></a>00662 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> == val_up.length(), <span class="stringliteral">"Wrong val_up"</span> ); |
|---|
| 471 | <a name="l00663"></a>00663 set_subvector ( val_up, <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a>, val ); |
|---|
| 472 | <a name="l00664"></a>00664 } |
|---|
| 473 | <a name="l00666"></a><a class="code" href="classbdm_1_1datalink.html#340c5a253544a1dc2fd87932a5341c32">00666</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#340c5a253544a1dc2fd87932a5341c32" title="access functions">_upsize</a>() { |
|---|
| 474 | <a name="l00667"></a>00667 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a>; |
|---|
| 475 | <a name="l00668"></a>00668 } |
|---|
| 476 | <a name="l00670"></a><a class="code" href="classbdm_1_1datalink.html#8f0cce4477e906f3090bb803e06d8698">00670</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink.html#8f0cce4477e906f3090bb803e06d8698" title="access functions">_downsize</a>() { |
|---|
| 477 | <a name="l00671"></a>00671 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>; |
|---|
| 478 | <a name="l00672"></a>00672 } |
|---|
| 479 | <a name="l00673"></a>00673 }; |
|---|
| 480 | <a name="l00674"></a>00674 |
|---|
| 481 | <a name="l00677"></a><a class="code" href="classbdm_1_1datalink__part.html">00677</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__part.html">datalink_part</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> { |
|---|
| 482 | <a name="l00678"></a>00678 <span class="keyword">protected</span>: |
|---|
| 483 | <a name="l00680"></a><a class="code" href="classbdm_1_1datalink__part.html#64f64e7e6357419240bc2b1b0749c943">00680</a> ivec <a class="code" href="classbdm_1_1datalink__part.html#64f64e7e6357419240bc2b1b0749c943" title="indeces of values in vector downsize">v2v_down</a>; |
|---|
| 484 | <a name="l00681"></a>00681 <span class="keyword">public</span>: |
|---|
| 485 | <a name="l00682"></a>00682 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__part.html#6cef1083755c27e4476501abe6f49dce" title="set connection, rv must be fully present in rv_up">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ); |
|---|
| 486 | <a name="l00684"></a><a class="code" href="classbdm_1_1datalink__part.html#aba9b673ef82584e1bc06cc7a32b0a59">00684</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__part.html#aba9b673ef82584e1bc06cc7a32b0a59" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( <span class="keyword">const</span> vec &val_up, vec &val_down ) { |
|---|
| 487 | <a name="l00685"></a>00685 set_subvector ( val_down, <a class="code" href="classbdm_1_1datalink__part.html#64f64e7e6357419240bc2b1b0749c943" title="indeces of values in vector downsize">v2v_down</a>, val_up ( <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a> ) ); |
|---|
| 488 | <a name="l00686"></a>00686 } |
|---|
| 489 | <a name="l00687"></a>00687 }; |
|---|
| 490 | <a name="l00688"></a>00688 |
|---|
| 491 | <a name="l00693"></a><a class="code" href="classbdm_1_1datalink__buffered.html">00693</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink__part.html">datalink_part</a> { |
|---|
| 492 | <a name="l00694"></a>00694 <span class="keyword">protected</span>: |
|---|
| 493 | <a name="l00696"></a><a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988">00696</a> vec <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a>; |
|---|
| 494 | <a name="l00698"></a><a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc">00698</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>; |
|---|
| 495 | <a name="l00700"></a><a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7">00700</a> ivec <a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7" title="h2v : indeces in down">h2v_down</a>; |
|---|
| 496 | <a name="l00702"></a><a class="code" href="classbdm_1_1datalink__buffered.html#da58df16761169992059b8cd91d070c5">00702</a> ivec <a class="code" href="classbdm_1_1datalink__buffered.html#da58df16761169992059b8cd91d070c5" title="h2v : indeces in history">h2v_hist</a>; |
|---|
| 497 | <a name="l00704"></a><a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc">00704</a> ivec <a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc" title="v2h: indeces of up too be pushed to h">v2h_up</a>; |
|---|
| 498 | <a name="l00705"></a>00705 <span class="keyword">public</span>: |
|---|
| 499 | <a name="l00706"></a>00706 |
|---|
| 500 | <a name="l00707"></a>00707 <a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a>() : <a class="code" href="classbdm_1_1datalink__part.html">datalink_part</a>(), <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a> ( 0 ), <a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7" title="h2v : indeces in down">h2v_down</a> ( 0 ), <a class="code" href="classbdm_1_1datalink__buffered.html#da58df16761169992059b8cd91d070c5" title="h2v : indeces in history">h2v_hist</a> ( 0 ) {}; |
|---|
| 501 | <a name="l00709"></a><a class="code" href="classbdm_1_1datalink__buffered.html#f137706c55891ba8a8aecc52ea96865f">00709</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__buffered.html#f137706c55891ba8a8aecc52ea96865f" title="push current data to history">step</a> ( <span class="keyword">const</span> vec &val_up ) { |
|---|
| 502 | <a name="l00710"></a>00710 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc" title="v2h: indeces of up too be pushed to h">v2h_up</a>.length() > 0 ) { |
|---|
| 503 | <a name="l00711"></a>00711 <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a>.shift_right ( 0, <a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc" title="v2h: indeces of up too be pushed to h">v2h_up</a>.length() ); |
|---|
| 504 | <a name="l00712"></a>00712 <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a>.set_subvector ( 0, val_up(<a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc" title="v2h: indeces of up too be pushed to h">v2h_up</a>) ); |
|---|
| 505 | <a name="l00713"></a>00713 } |
|---|
| 506 | <a name="l00714"></a>00714 } |
|---|
| 507 | <a name="l00716"></a><a class="code" href="classbdm_1_1datalink__buffered.html#e665d66cb42862c1181645c438110a96">00716</a> vec <a class="code" href="classbdm_1_1datalink__buffered.html#e665d66cb42862c1181645c438110a96" title="Get val for myself from val of &quot;Up&quot;.">pushdown</a> ( <span class="keyword">const</span> vec &val_up ) { |
|---|
| 508 | <a name="l00717"></a>00717 vec tmp ( <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> ); |
|---|
| 509 | <a name="l00718"></a>00718 <a class="code" href="classbdm_1_1datalink__buffered.html#681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( val_up, tmp ); |
|---|
| 510 | <a name="l00719"></a>00719 <span class="keywordflow">return</span> tmp; |
|---|
| 511 | <a name="l00720"></a>00720 } |
|---|
| 512 | <a name="l00721"></a>00721 |
|---|
| 513 | <a name="l00722"></a><a class="code" href="classbdm_1_1datalink__buffered.html#681745a319728a416486df38aacd579f">00722</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__buffered.html#681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( <span class="keyword">const</span> vec &val_up, vec &val_down ) { |
|---|
| 514 | <a name="l00723"></a>00723 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( val_down.length() >= <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a>, <span class="stringliteral">"short val_down"</span> ); |
|---|
| 515 | <a name="l00724"></a>00724 |
|---|
| 516 | <a name="l00725"></a>00725 set_subvector ( val_down, <a class="code" href="classbdm_1_1datalink__part.html#64f64e7e6357419240bc2b1b0749c943" title="indeces of values in vector downsize">v2v_down</a>, val_up ( <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a> ) ); <span class="comment">// copy direct values</span> |
|---|
| 517 | <a name="l00726"></a>00726 set_subvector ( val_down, <a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7" title="h2v : indeces in down">h2v_down</a>, <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a> ( <a class="code" href="classbdm_1_1datalink__buffered.html#da58df16761169992059b8cd91d070c5" title="h2v : indeces in history">h2v_hist</a> ) ); <span class="comment">// copy delayed values</span> |
|---|
| 518 | <a name="l00727"></a>00727 } |
|---|
| 519 | <a name="l00728"></a>00728 |
|---|
| 520 | <a name="l00729"></a><a class="code" href="classbdm_1_1datalink__buffered.html#adefa427312905425ebab8531da1846a">00729</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__buffered.html#adefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ) { |
|---|
| 521 | <a name="l00730"></a>00730 <span class="comment">// create link between up and down</span> |
|---|
| 522 | <a name="l00731"></a>00731 <a class="code" href="classbdm_1_1datalink__buffered.html#adefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">datalink_part::set_connection</a> ( rv, rv_up ); |
|---|
| 523 | <a name="l00732"></a>00732 |
|---|
| 524 | <a name="l00733"></a>00733 <span class="comment">// create rvs of history</span> |
|---|
| 525 | <a name="l00734"></a>00734 <span class="comment">// we can store only what we get in rv_up - everything else is removed</span> |
|---|
| 526 | <a name="l00735"></a>00735 ivec valid_ids = rv.<a class="code" href="classbdm_1_1RV.html#a858d36d0264e1f1c89500531162fdf1" title="Find indices of self in another rv, ignore time,.">findself_ids</a> ( rv_up ); |
|---|
| 527 | <a name="l00736"></a>00736 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> rv_hist = rv.<a class="code" href="classbdm_1_1RV.html#c0c04ab99ded62e1e05bcefb151ebeb9" title="Select only variables at indices ind.">subselect</a> ( find ( valid_ids >= 0 ) ); <span class="comment">// select only rvs that are in rv_up</span> |
|---|
| 528 | <a name="l00737"></a>00737 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> rv_hist0 =rv_hist.remove_time(); <span class="comment">// these RVs will form history at time =0</span> |
|---|
| 529 | <a name="l00738"></a>00738 <span class="comment">// now we need to know what is needed from Up</span> |
|---|
| 530 | <a name="l00739"></a>00739 rv_hist = rv_hist.<a class="code" href="classbdm_1_1RV.html#c5819f71d774649412c10b8e1716be1e" title="return rvs with expanded delayes and sorted in the order of:">expand_delayes</a>(); <span class="comment">// full regressor - including time 0</span> |
|---|
| 531 | <a name="l00740"></a>00740 <a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>=rv_hist.<a class="code" href="classbdm_1_1RV.html#aec44dabdf0a6d90fbae95e1356eda39" title="Subtract another variable from the current one.">subt</a>(rv_hist0); <span class="comment">// remove time 0</span> |
|---|
| 532 | <a name="l00741"></a>00741 <a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a> = zeros ( <a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ); |
|---|
| 533 | <a name="l00742"></a>00742 |
|---|
| 534 | <a name="l00743"></a>00743 <span class="comment">// decide if we need to copy val to history</span> |
|---|
| 535 | <a name="l00744"></a>00744 <span class="keywordflow">if</span> (<a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() >0) { |
|---|
| 536 | <a name="l00745"></a>00745 <a class="code" href="classbdm_1_1datalink__buffered.html#0b09e10e42212497170ed5642bce7dbc" title="v2h: indeces of up too be pushed to h">v2h_up</a> = rv_hist0.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a>(rv_up); <span class="comment">// indeces of elements of rv_up to be copied</span> |
|---|
| 537 | <a name="l00746"></a>00746 } <span class="comment">// else v2h_up is empty</span> |
|---|
| 538 | <a name="l00747"></a>00747 |
|---|
| 539 | <a name="l00748"></a>00748 <a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a> ( rv, <a class="code" href="classbdm_1_1datalink__buffered.html#da58df16761169992059b8cd91d070c5" title="h2v : indeces in history">h2v_hist</a>, <a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7" title="h2v : indeces in down">h2v_down</a> ); |
|---|
| 540 | <a name="l00749"></a>00749 |
|---|
| 541 | <a name="l00750"></a>00750 <a class="code" href="classbdm_1_1datalink.html#bc8ff50395fc1066a1e486dea18d987c" title="Remember how long val should be.">downsize</a> = <a class="code" href="classbdm_1_1datalink__part.html#64f64e7e6357419240bc2b1b0749c943" title="indeces of values in vector downsize">v2v_down</a>.length() + <a class="code" href="classbdm_1_1datalink__buffered.html#a1ce2032fe5c86fa87d80baccb9aacd7" title="h2v : indeces in down">h2v_down</a>.length(); |
|---|
| 542 | <a name="l00751"></a>00751 <a class="code" href="classbdm_1_1datalink.html#0f0d0af6848114d96108d3a6af25a045" title="Remember how long val of &quot;Up&quot; should be.">upsize</a> = <a class="code" href="classbdm_1_1datalink.html#240b37d793c6bdc32824ed0a0541b1eb" title="val-to-val link, indices of the upper val">v2v_up</a>.length(); |
|---|
| 543 | <a name="l00752"></a>00752 } |
|---|
| 544 | <a name="l00754"></a><a class="code" href="classbdm_1_1datalink__buffered.html#c95435dc0781d14529cddde9b2894b6d">00754</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__buffered.html#c95435dc0781d14529cddde9b2894b6d" title="set history of variable given by rv1 to values of hist.">set_history</a>(<span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& rv1, <span class="keyword">const</span> vec &hist0){ |
|---|
| 545 | <a name="l00755"></a>00755 <a class="code" href="bdmerror_8h.html#7a3399d182b8e3065532596e76f84849" title="Throw std::runtime_exception if t is not true.">bdm_assert</a>(rv1.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>()==hist0.length(),<span class="stringliteral">"hist is not compatible with given rv1"</span>); |
|---|
| 546 | <a name="l00756"></a>00756 ivec ind_H; |
|---|
| 547 | <a name="l00757"></a>00757 ivec ind_h0; |
|---|
| 548 | <a name="l00758"></a>00758 <a class="code" href="classbdm_1_1datalink__buffered.html#211c56b68be3864d535a8b75d735ebdc" title="rv of the history">Hrv</a>.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a>(rv1, ind_H, ind_h0); <span class="comment">// find indeces of rv in </span> |
|---|
| 549 | <a name="l00759"></a>00759 set_subvector(<a class="code" href="classbdm_1_1datalink__buffered.html#a7cb8a47b88b95fde0255a041d076988" title="History, ordered as .">history</a>, ind_H, hist0(ind_h0)); <span class="comment">// copy given hist to appropriate places</span> |
|---|
| 550 | <a name="l00760"></a>00760 } |
|---|
| 551 | <a name="l00761"></a>00761 }; |
|---|
| 552 | <a name="l00762"></a>00762 |
|---|
| 553 | <a name="l00764"></a><a class="code" href="classbdm_1_1datalink__2to1__buffered.html">00764</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__2to1__buffered.html" title="buffered datalink from 2 vectors to 1">datalink_2to1_buffered</a> { |
|---|
| 554 | <a name="l00765"></a>00765 <span class="keyword">protected</span>: |
|---|
| 555 | <a name="l00766"></a>00766 <a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a> dl1; |
|---|
| 556 | <a name="l00767"></a>00767 <a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a> dl2; |
|---|
| 557 | <a name="l00768"></a>00768 <span class="keyword">public</span>: |
|---|
| 558 | <a name="l00770"></a><a class="code" href="classbdm_1_1datalink__2to1__buffered.html#ef1441b4885ae4d8e95b3ff28e575364">00770</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__2to1__buffered.html#ef1441b4885ae4d8e95b3ff28e575364" title="set connection between RVs">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up1, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up2 ) { |
|---|
| 559 | <a name="l00771"></a>00771 dl1.<a class="code" href="classbdm_1_1datalink__buffered.html#adefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rv, rv_up1 ); |
|---|
| 560 | <a name="l00772"></a>00772 dl2.<a class="code" href="classbdm_1_1datalink__buffered.html#adefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rv, rv_up2 ); |
|---|
| 561 | <a name="l00773"></a>00773 } |
|---|
| 562 | <a name="l00774"></a>00774 <span class="keywordtype">void</span> filldown ( <span class="keyword">const</span> vec &val1, <span class="keyword">const</span> vec &val2, vec &val_down ) { |
|---|
| 563 | <a name="l00775"></a>00775 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( val_down.length() >= dl1.<a class="code" href="classbdm_1_1datalink.html#8f0cce4477e906f3090bb803e06d8698" title="access functions">_downsize</a>() + dl2.<a class="code" href="classbdm_1_1datalink.html#8f0cce4477e906f3090bb803e06d8698" title="access functions">_downsize</a>(), <span class="stringliteral">"short val_down"</span> ); |
|---|
| 564 | <a name="l00776"></a>00776 dl1.<a class="code" href="classbdm_1_1datalink__buffered.html#681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( val1, val_down ); |
|---|
| 565 | <a name="l00777"></a>00777 dl2.<a class="code" href="classbdm_1_1datalink__buffered.html#681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &quot;Up&quot;.">filldown</a> ( val2, val_down ); |
|---|
| 566 | <a name="l00778"></a>00778 } |
|---|
| 567 | <a name="l00779"></a>00779 <span class="keywordtype">void</span> step ( <span class="keyword">const</span> vec &dt, <span class="keyword">const</span> vec &ut ) { |
|---|
| 568 | <a name="l00780"></a>00780 dl1.step ( dt ); |
|---|
| 569 | <a name="l00781"></a>00781 dl2.step ( ut ); |
|---|
| 570 | <a name="l00782"></a>00782 } |
|---|
| 571 | <a name="l00783"></a>00783 }; |
|---|
| 572 | <a name="l00784"></a>00784 |
|---|
| 573 | <a name="l00785"></a>00785 |
|---|
| 574 | <a name="l00786"></a>00786 |
|---|
| 575 | <a name="l00788"></a><a class="code" href="classbdm_1_1datalink__m2e.html">00788</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__m2e.html" title="Data link with a condition.">datalink_m2e</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> { |
|---|
| 576 | <a name="l00789"></a>00789 <span class="keyword">protected</span>: |
|---|
| 577 | <a name="l00791"></a><a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9">00791</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a>; |
|---|
| 578 | <a name="l00792"></a>00792 |
|---|
| 579 | <a name="l00794"></a><a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783">00794</a> ivec <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indices of the upper val">v2c_up</a>; |
|---|
| 580 | <a name="l00795"></a>00795 |
|---|
| 581 | <a name="l00797"></a><a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc">00797</a> ivec <a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, indices of the local cond">v2c_lo</a>; |
|---|
| 582 | <a name="l00798"></a>00798 |
|---|
| 583 | <a name="l00799"></a>00799 <span class="keyword">public</span>: |
|---|
| 584 | <a name="l00801"></a><a class="code" href="classbdm_1_1datalink__m2e.html#5ad951e9cf850c9bfe4e492e91a50af6">00801</a> <a class="code" href="classbdm_1_1datalink__m2e.html#5ad951e9cf850c9bfe4e492e91a50af6" title="Constructor.">datalink_m2e</a>() : <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a> ( 0 ) { } |
|---|
| 585 | <a name="l00802"></a>00802 |
|---|
| 586 | <a name="l00804"></a>00804 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__m2e.html#add918bf877c48714cff51ee4ad989b0" title="Set connection between vectors.">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up ); |
|---|
| 587 | <a name="l00805"></a>00805 |
|---|
| 588 | <a name="l00807"></a>00807 vec <a class="code" href="classbdm_1_1datalink__m2e.html#7ba850822e3cf9a4b079afc7e7c01703" title="Construct condition.">get_cond</a> ( <span class="keyword">const</span> vec &val_up ); |
|---|
| 589 | <a name="l00808"></a>00808 |
|---|
| 590 | <a name="l00810"></a>00810 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__m2e.html#b29bc3c7bf2a1d87e77ccaa793d097d5" title="Copy corresponding values to Up.condition.">pushup_cond</a> ( vec &val_up, <span class="keyword">const</span> vec &val, <span class="keyword">const</span> vec &cond ); |
|---|
| 591 | <a name="l00811"></a>00811 }; |
|---|
| 592 | <a name="l00812"></a>00812 |
|---|
| 593 | <a name="l00815"></a><a class="code" href="classbdm_1_1datalink__m2m.html">00815</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1datalink__m2m.html" title="DataLink is a connection between mpdf and its superordinate (Up) This class links...">datalink_m2m</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1datalink__m2e.html" title="Data link with a condition.">datalink_m2e</a> { |
|---|
| 594 | <a name="l00816"></a>00816 <span class="keyword">protected</span>: |
|---|
| 595 | <a name="l00818"></a><a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d">00818</a> ivec <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indices of the upper cond">c2c_up</a>; |
|---|
| 596 | <a name="l00820"></a><a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5">00820</a> ivec <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indices of the local cond">c2c_lo</a>; |
|---|
| 597 | <a name="l00821"></a>00821 |
|---|
| 598 | <a name="l00822"></a>00822 <span class="keyword">public</span>: |
|---|
| 599 | <a name="l00824"></a><a class="code" href="classbdm_1_1datalink__m2m.html#3baed32cb66f0e2f731032cec0a4d287">00824</a> <a class="code" href="classbdm_1_1datalink__m2m.html#3baed32cb66f0e2f731032cec0a4d287" title="Constructor.">datalink_m2m</a>() {}; |
|---|
| 600 | <a name="l00826"></a><a class="code" href="classbdm_1_1datalink__m2m.html#0ed49a99e8a3be264b952558b6f515d4">00826</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1datalink__m2m.html#0ed49a99e8a3be264b952558b6f515d4" title="Set connection between the vectors.">set_connection</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv_up, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rvc_up ) { |
|---|
| 601 | <a name="l00827"></a>00827 <a class="code" href="classbdm_1_1datalink__m2m.html#0ed49a99e8a3be264b952558b6f515d4" title="Set connection between the vectors.">datalink_m2e::set_connection</a> ( rv, rvc, rv_up ); |
|---|
| 602 | <a name="l00828"></a>00828 <span class="comment">//establish c2c connection</span> |
|---|
| 603 | <a name="l00829"></a>00829 rvc.<a class="code" href="classbdm_1_1RV.html#cbebdb5e0d30101a6eb63550ef701c55" title="when this rv is a part of bigger rv, this function returns indices of self in the...">dataind</a> ( rvc_up, <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indices of the local cond">c2c_lo</a>, <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indices of the upper cond">c2c_up</a> ); |
|---|
| 604 | <a name="l00830"></a>00830 <a class="code" href="bdmerror_8h.html#89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indices of the local cond">c2c_lo</a>.length() + <a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, indices of the local cond">v2c_lo</a>.length() == <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a>, <span class="stringliteral">"cond is not fully given"</span> ); |
|---|
| 605 | <a name="l00831"></a>00831 } |
|---|
| 606 | <a name="l00832"></a>00832 |
|---|
| 607 | <a name="l00834"></a><a class="code" href="classbdm_1_1datalink__m2m.html#911fb7fcfa80d4e31db8e0cc03141a90">00834</a> vec <a class="code" href="classbdm_1_1datalink__m2m.html#911fb7fcfa80d4e31db8e0cc03141a90" title="Get cond for myself from val and cond of &quot;Up&quot;.">get_cond</a> ( <span class="keyword">const</span> vec &val_up, <span class="keyword">const</span> vec &cond_up ) { |
|---|
| 608 | <a name="l00835"></a>00835 vec tmp ( <a class="code" href="classbdm_1_1datalink__m2e.html#3fb26525e0bfa7932a37c5cd404801f9" title="Remember how long cond should be.">condsize</a> ); |
|---|
| 609 | <a name="l00836"></a>00836 set_subvector ( tmp, <a class="code" href="classbdm_1_1datalink__m2e.html#9e0048d87bda78e9b8d38761440c7abc" title="upper_val-to-local_cond link, indices of the local cond">v2c_lo</a>, val_up ( <a class="code" href="classbdm_1_1datalink__m2e.html#43fe3e2d7aa04134053ec15793722783" title="upper_val-to-local_cond link, indices of the upper val">v2c_up</a> ) ); |
|---|
| 610 | <a name="l00837"></a>00837 set_subvector ( tmp, <a class="code" href="classbdm_1_1datalink__m2m.html#0ea05c47de4538b7042ff878e6e309a5" title="cond-to-cond link, indices of the local cond">c2c_lo</a>, cond_up ( <a class="code" href="classbdm_1_1datalink__m2m.html#d64dda6f92654628276bbcebb7600d0d" title="cond-to-cond link, indices of the upper cond">c2c_up</a> ) ); |
|---|
| 611 | <a name="l00838"></a>00838 <span class="keywordflow">return</span> tmp; |
|---|
| 612 | <a name="l00839"></a>00839 } |
|---|
| 613 | <a name="l00841"></a>00841 |
|---|
| 614 | <a name="l00842"></a>00842 }; |
|---|
| 615 | <a name="l00843"></a>00843 |
|---|
| 616 | <a name="l00849"></a><a class="code" href="classbdm_1_1logger.html">00849</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 617 | <a name="l00850"></a>00850 <span class="keyword">protected</span>: |
|---|
| 618 | <a name="l00852"></a><a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f">00852</a> Array<RV> <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>; |
|---|
| 619 | <a name="l00854"></a><a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02">00854</a> Array<string> <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a>; |
|---|
| 620 | <a name="l00855"></a>00855 <span class="keyword">public</span>: |
|---|
| 621 | <a name="l00857"></a><a class="code" href="classbdm_1_1logger.html#f9c2fe7db5ddbda0098a4a5bd2c29fbf">00857</a> <a class="code" href="classbdm_1_1logger.html#f9c2fe7db5ddbda0098a4a5bd2c29fbf" title="Default constructor.">logger</a>() : <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a> ( 0 ), <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a> ( 0 ) {} |
|---|
| 622 | <a name="l00858"></a>00858 |
|---|
| 623 | <a name="l00861"></a><a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7">00861</a> <span class="keyword">virtual</span> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &rv, <span class="keywordtype">string</span> prefix = <span class="stringliteral">""</span> ) { |
|---|
| 624 | <a name="l00862"></a>00862 <span class="keywordtype">int</span> id; |
|---|
| 625 | <a name="l00863"></a>00863 <span class="keywordflow">if</span> ( rv.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() > 0 ) { |
|---|
| 626 | <a name="l00864"></a>00864 <span class="keywordtype">id</span> = <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>.length(); |
|---|
| 627 | <a name="l00865"></a>00865 <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a> = concat ( <a class="code" href="classbdm_1_1logger.html#68ca1f05cf3d414ba0f39211977b8d02" title="Names of logged quantities, e.g. names of algorithm variants.">names</a>, prefix ); <span class="comment">// diff</span> |
|---|
| 628 | <a name="l00866"></a>00866 <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a>.set_length ( <span class="keywordtype">id</span> + 1, <span class="keyword">true</span> ); |
|---|
| 629 | <a name="l00867"></a>00867 <a class="code" href="classbdm_1_1logger.html#c54566a4554089443a20b2a49ed1a61f" title="RVs of all logged variables.">entries</a> ( <span class="keywordtype">id</span> ) = rv; |
|---|
| 630 | <a name="l00868"></a>00868 } <span class="keywordflow">else</span> { |
|---|
| 631 | <a name="l00869"></a>00869 <span class="keywordtype">id</span> = -1; |
|---|
| 632 | <a name="l00870"></a>00870 } |
|---|
| 633 | <a name="l00871"></a>00871 <span class="keywordflow">return</span> id; <span class="comment">// identifier of the last entry</span> |
|---|
| 634 | <a name="l00872"></a>00872 } |
|---|
| 635 | <a name="l00873"></a>00873 |
|---|
| 636 | <a name="l00875"></a><a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309">00875</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <span class="keywordtype">int</span> <span class="keywordtype">id</span>, <span class="keyword">const</span> vec &v ) { |
|---|
| 637 | <a name="l00876"></a>00876 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 638 | <a name="l00877"></a>00877 }; |
|---|
| 639 | <a name="l00879"></a><a class="code" href="classbdm_1_1logger.html#aa1d72cd3d2ff6bbf87340154af02ea6">00879</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#aa1d72cd3d2ff6bbf87340154af02ea6" title="log this double">logit</a> ( <span class="keywordtype">int</span> <span class="keywordtype">id</span>, <span class="keyword">const</span> <span class="keywordtype">double</span> &d ) { |
|---|
| 640 | <a name="l00880"></a>00880 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 641 | <a name="l00881"></a>00881 }; |
|---|
| 642 | <a name="l00882"></a>00882 |
|---|
| 643 | <a name="l00884"></a><a class="code" href="classbdm_1_1logger.html#f137e9a0c905357c5c3fbb16eac34a99">00884</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#f137e9a0c905357c5c3fbb16eac34a99" title="Shifts storage position for another time step.">step</a>() { |
|---|
| 644 | <a name="l00885"></a>00885 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemneted"</span> ); |
|---|
| 645 | <a name="l00886"></a>00886 }; |
|---|
| 646 | <a name="l00887"></a>00887 |
|---|
| 647 | <a name="l00889"></a><a class="code" href="classbdm_1_1logger.html#0e3fc7d13e23a8f71fc7c8a5ea68559d">00889</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#0e3fc7d13e23a8f71fc7c8a5ea68559d" title="Finalize storing information.">finalize</a>() {}; |
|---|
| 648 | <a name="l00890"></a>00890 |
|---|
| 649 | <a name="l00892"></a><a class="code" href="classbdm_1_1logger.html#cd6291a73491f755dc7bc88d022eb2fc">00892</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1logger.html#cd6291a73491f755dc7bc88d022eb2fc" title="Initialize the storage.">init</a>() {}; |
|---|
| 650 | <a name="l00893"></a>00893 |
|---|
| 651 | <a name="l00894"></a>00894 }; |
|---|
| 652 | <a name="l00895"></a>00895 |
|---|
| 653 | <a name="l00899"></a><a class="code" href="classbdm_1_1mepdf.html">00899</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1mepdf.html" title="Unconditional mpdf, allows using epdf in the role of mpdf.">mepdf</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a> { |
|---|
| 654 | <a name="l00901"></a>00901 <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr<epdf></a> iepdf; |
|---|
| 655 | <a name="l00902"></a>00902 <span class="keyword">public</span>: |
|---|
| 656 | <a name="l00904"></a><a class="code" href="classbdm_1_1mepdf.html#4a2b01e7bb510c6b8946757cae6c9155">00904</a> <a class="code" href="classbdm_1_1mepdf.html#4a2b01e7bb510c6b8946757cae6c9155" title="Default constructor.">mepdf</a>() { } |
|---|
| 657 | <a name="l00906"></a><a class="code" href="classbdm_1_1mepdf.html#1f94e70702ff676f53d95ca7ec38e25c">00906</a> <a class="code" href="classbdm_1_1mepdf.html#1f94e70702ff676f53d95ca7ec38e25c" title="Set internal shared pointer.">mepdf</a> ( <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr<epdf></a> em ) { |
|---|
| 658 | <a name="l00907"></a>00907 iepdf = em; |
|---|
| 659 | <a name="l00908"></a>00908 <a class="code" href="classbdm_1_1mpdf.html#147afacb393324bb3f9a7a89e33f835e" title="set internal pointer ep to point to given iepdf ">set_ep</a> ( *iepdf.<a class="code" href="classbdm_1_1shared__ptr.html#37ebcfb6750dd7b5630f1d2354c07a96">get</a>() ); |
|---|
| 660 | <a name="l00909"></a>00909 <a class="code" href="classbdm_1_1mpdf.html#7c1900976ff13dbc09c9729b3bbff9e6" title="dimension of the condition">dimc</a> = 0; |
|---|
| 661 | <a name="l00910"></a>00910 } |
|---|
| 662 | <a name="l00911"></a>00911 |
|---|
| 663 | <a name="l00913"></a><a class="code" href="classbdm_1_1mepdf.html#b904a90ef78294040b498717cc13015e">00913</a> vec <a class="code" href="classbdm_1_1mepdf.html#b904a90ef78294040b498717cc13015e" title="empty">samplecond</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 664 | <a name="l00914"></a>00914 <span class="keywordflow">return</span> iepdf->sample(); |
|---|
| 665 | <a name="l00915"></a>00915 } |
|---|
| 666 | <a name="l00916"></a><a class="code" href="classbdm_1_1mepdf.html#57decd7718f3789e9d1f10f19def935b">00916</a> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1mepdf.html#57decd7718f3789e9d1f10f19def935b" title="Shortcut for conditioning and evaluation of the internal epdf. In some cases, this...">evallogcond</a> ( <span class="keyword">const</span> vec &val, <span class="keyword">const</span> vec &cond ) { |
|---|
| 667 | <a name="l00917"></a>00917 <span class="keywordflow">return</span> iepdf->evallog ( val ); |
|---|
| 668 | <a name="l00918"></a>00918 } |
|---|
| 669 | <a name="l00919"></a>00919 |
|---|
| 670 | <a name="l00927"></a>00927 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1mepdf.html#27ef18a3e3b1b5de02739d1324bf25fb" title="Load from structure with elements:.">from_setting</a> ( <span class="keyword">const</span> Setting &<span class="keyword">set</span> ); |
|---|
| 671 | <a name="l00928"></a>00928 }; |
|---|
| 672 | <a name="l00929"></a>00929 <a class="code" href="user__info_8h.html#4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( mepdf ); |
|---|
| 673 | <a name="l00930"></a>00930 SHAREDPTR ( mepdf ); |
|---|
| 674 | <a name="l00931"></a>00931 |
|---|
| 675 | <a name="l00933"></a>00933 RV get_composite_rv ( <span class="keyword">const</span> Array<shared_ptr<mpdf> > &mpdfs, <span class="keywordtype">bool</span> checkoverlap = <span class="keyword">false</span> ); |
|---|
| 676 | <a name="l00934"></a>00934 |
|---|
| 677 | <a name="l00950"></a><a class="code" href="classbdm_1_1DS.html">00950</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 678 | <a name="l00951"></a>00951 <span class="keyword">protected</span>: |
|---|
| 679 | <a name="l00953"></a><a class="code" href="classbdm_1_1DS.html#f96cae44624e79638a91ec4f2c7c81a9">00953</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#f96cae44624e79638a91ec4f2c7c81a9" title="size of data returned by getdata() ">dtsize</a>; |
|---|
| 680 | <a name="l00955"></a><a class="code" href="classbdm_1_1DS.html#d7467046a0bd05bc992cc5e1bdedb983">00955</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#d7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a>; |
|---|
| 681 | <a name="l00957"></a><a class="code" href="classbdm_1_1DS.html#22a4b29aa6e9f3bf17bcc4b28567e8bd">00957</a> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#22a4b29aa6e9f3bf17bcc4b28567e8bd" title="size of output">ytsize</a>; |
|---|
| 682 | <a name="l00959"></a><a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec">00959</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>; |
|---|
| 683 | <a name="l00961"></a><a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702">00961</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>; <span class="comment">//</span> |
|---|
| 684 | <a name="l00963"></a><a class="code" href="classbdm_1_1DS.html#eb9de2a85f0d8257d79d9b68c05c4995">00963</a> <span class="comment"></span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1DS.html#eb9de2a85f0d8257d79d9b68c05c4995" title="Description of output data.">Yrv</a>; <span class="comment">//</span> |
|---|
| 685 | <a name="l00965"></a><a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867">00965</a> <span class="comment"></span> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>, L_ut; |
|---|
| 686 | <a name="l00966"></a>00966 <span class="keyword">public</span>: |
|---|
| 687 | <a name="l00968"></a><a class="code" href="classbdm_1_1DS.html#bedd82e08ae6686b4b1732a122c2201a">00968</a> <a class="code" href="classbdm_1_1DS.html#bedd82e08ae6686b4b1732a122c2201a" title="default constructors">DS</a>() : <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>(), <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>(),<a class="code" href="classbdm_1_1DS.html#eb9de2a85f0d8257d79d9b68c05c4995" title="Description of output data.">Yrv</a>() {}; |
|---|
| 688 | <a name="l00969"></a>00969 |
|---|
| 689 | <a name="l00971"></a><a class="code" href="classbdm_1_1DS.html#76d11928675f276f805655ae2a05d773">00971</a> <span class="keyword">virtual</span> <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1DS.html#76d11928675f276f805655ae2a05d773" title="Returns maximum number of provided data, by default it is set to maximum allowed...">max_length</a>() {<span class="keywordflow">return</span> std::numeric_limits< int >::max();} |
|---|
| 690 | <a name="l00973"></a><a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba">00973</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &dt ) { |
|---|
| 691 | <a name="l00974"></a>00974 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"abstract class"</span> ); |
|---|
| 692 | <a name="l00975"></a>00975 } |
|---|
| 693 | <a name="l00977"></a><a class="code" href="classbdm_1_1DS.html#a0bf451c7fea73ff4150ff9e83da4832">00977</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#a0bf451c7fea73ff4150ff9e83da4832" title="Returns data records at indeces.">getdata</a> ( vec &dt, <span class="keyword">const</span> ivec &indeces ) { |
|---|
| 694 | <a name="l00978"></a>00978 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"abstract class"</span> ); |
|---|
| 695 | <a name="l00979"></a>00979 } |
|---|
| 696 | <a name="l00980"></a>00980 |
|---|
| 697 | <a name="l00982"></a><a class="code" href="classbdm_1_1DS.html#f5baeee8528e5e4c5c7a344b2e3f192a">00982</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#f5baeee8528e5e4c5c7a344b2e3f192a" title="Accepts action variable and schedule it for application.">write</a> ( vec &ut ) { |
|---|
| 698 | <a name="l00983"></a>00983 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"abstract class"</span> ); |
|---|
| 699 | <a name="l00984"></a>00984 } |
|---|
| 700 | <a name="l00985"></a>00985 |
|---|
| 701 | <a name="l00987"></a><a class="code" href="classbdm_1_1DS.html#6bced13f84f6bf04449728817e049e1d">00987</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#6bced13f84f6bf04449728817e049e1d" title="Accepts action variables at specific indeces.">write</a> ( vec &ut, <span class="keyword">const</span> ivec &indeces ) { |
|---|
| 702 | <a name="l00988"></a>00988 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"abstract class"</span> ); |
|---|
| 703 | <a name="l00989"></a>00989 } |
|---|
| 704 | <a name="l00990"></a>00990 |
|---|
| 705 | <a name="l00992"></a><a class="code" href="classbdm_1_1DS.html#4df78b21d352013d8804a8dda860b7ea">00992</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#4df78b21d352013d8804a8dda860b7ea" title="Moves from to , i.e. perfroms the actions and reads response of the system.">step</a>() |
|---|
| 706 | <a name="l00993"></a>00993 { |
|---|
| 707 | <a name="l00994"></a>00994 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"abstract class"</span> ); |
|---|
| 708 | <a name="l00995"></a>00995 } |
|---|
| 709 | <a name="l00996"></a>00996 |
|---|
| 710 | <a name="l00998"></a><a class="code" href="classbdm_1_1DS.html#3c9e417d85052396fe74c164857ee67e">00998</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#3c9e417d85052396fe74c164857ee67e" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L ) { |
|---|
| 711 | <a name="l00999"></a>00999 <a class="code" href="bdmerror_8h.html#7a3399d182b8e3065532596e76f84849" title="Throw std::runtime_exception if t is not true.">bdm_assert</a> ( <a class="code" href="classbdm_1_1DS.html#f96cae44624e79638a91ec4f2c7c81a9" title="size of data returned by getdata() ">dtsize</a> == <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(), <span class="stringliteral">"invalid DS: dtsize ("</span> + num2str ( <a class="code" href="classbdm_1_1DS.html#f96cae44624e79638a91ec4f2c7c81a9" title="size of data returned by getdata() ">dtsize</a> ) + <span class="stringliteral">") different from Drv "</span> + num2str ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ) ); |
|---|
| 712 | <a name="l01000"></a>01000 <a class="code" href="bdmerror_8h.html#7a3399d182b8e3065532596e76f84849" title="Throw std::runtime_exception if t is not true.">bdm_assert</a> ( <a class="code" href="classbdm_1_1DS.html#d7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a> == <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(), <span class="stringliteral">"invalid DS: utsize ("</span> + num2str ( <a class="code" href="classbdm_1_1DS.html#d7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a> ) + <span class="stringliteral">") different from Urv "</span> + num2str ( <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ) ); |
|---|
| 713 | <a name="l01001"></a>01001 |
|---|
| 714 | <a name="l01002"></a>01002 <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a> = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>, <span class="stringliteral">""</span> ); |
|---|
| 715 | <a name="l01003"></a>01003 L_ut = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>, <span class="stringliteral">""</span> ); |
|---|
| 716 | <a name="l01004"></a>01004 } |
|---|
| 717 | <a name="l01006"></a><a class="code" href="classbdm_1_1DS.html#e03d2c93cddd5c3a03107ddd3ae999cf">01006</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#e03d2c93cddd5c3a03107ddd3ae999cf" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L ) { |
|---|
| 718 | <a name="l01007"></a>01007 vec tmp ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() + <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ); |
|---|
| 719 | <a name="l01008"></a>01008 <a class="code" href="classbdm_1_1DS.html#c1ec862dec7164fee3284c6f9a51b0ba" title="Returns full vector of observed data=[output, input].">getdata</a> ( tmp ); |
|---|
| 720 | <a name="l01009"></a>01009 <span class="comment">// d is first in getdata</span> |
|---|
| 721 | <a name="l01010"></a>01010 L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1DS.html#b4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>, tmp.left ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ) ); |
|---|
| 722 | <a name="l01011"></a>01011 <span class="comment">// u follows after d in getdata</span> |
|---|
| 723 | <a name="l01012"></a>01012 L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( L_ut, tmp.mid ( <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(), <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#de30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ) ); |
|---|
| 724 | <a name="l01013"></a>01013 } |
|---|
| 725 | <a name="l01015"></a><a class="code" href="classbdm_1_1DS.html#069497b610296be053d862a2493be0ce">01015</a> <span class="keyword">virtual</span> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1DS.html#069497b610296be053d862a2493be0ce" title="access function">_drv</a>()<span class="keyword"> const </span>{ |
|---|
| 726 | <a name="l01016"></a>01016 <span class="comment">// return concat (Drv, Urv);// why!!!</span> |
|---|
| 727 | <a name="l01017"></a>01017 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>;<span class="comment">// why!!!</span> |
|---|
| 728 | <a name="l01018"></a>01018 } |
|---|
| 729 | <a name="l01020"></a><a class="code" href="classbdm_1_1DS.html#a6a9a375da64c82fc227bda3418a1f33">01020</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1DS.html#a6a9a375da64c82fc227bda3418a1f33" title="access function">_urv</a>()<span class="keyword"> const </span>{ |
|---|
| 730 | <a name="l01021"></a>01021 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>; |
|---|
| 731 | <a name="l01022"></a>01022 } |
|---|
| 732 | <a name="l01024"></a><a class="code" href="classbdm_1_1DS.html#c09878f86907329ac631a3df8755c558">01024</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1DS.html#c09878f86907329ac631a3df8755c558" title="access function">_yrv</a>()<span class="keyword"> const </span>{ |
|---|
| 733 | <a name="l01025"></a>01025 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1DS.html#eb9de2a85f0d8257d79d9b68c05c4995" title="Description of output data.">Yrv</a>; |
|---|
| 734 | <a name="l01026"></a>01026 } |
|---|
| 735 | <a name="l01028"></a><a class="code" href="classbdm_1_1DS.html#3a92d77fd97fdb6bf1c8edb1e38c6bbc">01028</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1DS.html#3a92d77fd97fdb6bf1c8edb1e38c6bbc" title="set random variables">set_drv</a> (<span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &yrv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &urv) { |
|---|
| 736 | <a name="l01029"></a>01029 <a class="code" href="classbdm_1_1DS.html#eb9de2a85f0d8257d79d9b68c05c4995" title="Description of output data.">Yrv</a> = yrv; |
|---|
| 737 | <a name="l01030"></a>01030 <a class="code" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> = concat(yrv,urv); |
|---|
| 738 | <a name="l01031"></a>01031 <a class="code" href="classbdm_1_1DS.html#9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a> = urv; |
|---|
| 739 | <a name="l01032"></a>01032 } |
|---|
| 740 | <a name="l01033"></a>01033 }; |
|---|
| 741 | <a name="l01034"></a>01034 |
|---|
| 742 | <a name="l01056"></a><a class="code" href="classbdm_1_1BM.html">01056</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1root.html" title="Root class of BDM objects.">root</a> { |
|---|
| 743 | <a name="l01057"></a>01057 <span class="keyword">protected</span>: |
|---|
| 744 | <a name="l01059"></a><a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed">01059</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a>; |
|---|
| 745 | <a name="l01061"></a><a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a">01061</a> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a>; |
|---|
| 746 | <a name="l01063"></a><a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee">01063</a> <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a>; |
|---|
| 747 | <a name="l01064"></a>01064 <span class="keyword">public</span>: |
|---|
| 748 | <a name="l01067"></a>01067 |
|---|
| 749 | <a name="l01068"></a>01068 <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a>() : <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ( 0 ), <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ( true ), <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 4 ), <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 4 ) { |
|---|
| 750 | <a name="l01069"></a>01069 <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> = -1;<span class="comment">/*empty IDs*/</span> |
|---|
| 751 | <a name="l01070"></a>01070 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> = 0; |
|---|
| 752 | <a name="l01071"></a>01071 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 0 ) = 1; <span class="comment">/*log only mean*/</span> |
|---|
| 753 | <a name="l01072"></a>01072 }; |
|---|
| 754 | <a name="l01073"></a>01073 <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a> &B ) : <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a> ( B.<a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a> ), <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ( B.<a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ), <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ( B.<a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> ) {} |
|---|
| 755 | <a name="l01076"></a><a class="code" href="classbdm_1_1BM.html#40f01563651c1e4fe926189e41a6b8ab">01076</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1BM.html" title="Bayesian Model of a system, i.e. all uncertainty is modeled by probabilities.">BM</a>* <a class="code" href="classbdm_1_1BM.html#40f01563651c1e4fe926189e41a6b8ab">_copy_</a>()<span class="keyword"> const </span>{ |
|---|
| 756 | <a name="l01077"></a>01077 <span class="keywordflow">return</span> NULL; |
|---|
| 757 | <a name="l01078"></a>01078 }; |
|---|
| 758 | <a name="l01080"></a>01080 |
|---|
| 759 | <a name="l01083"></a>01083 |
|---|
| 760 | <a name="l01087"></a>01087 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#60b1779a577367c369a932cabd3a6188" title="Incremental Bayes rule.">bayes</a> ( <span class="keyword">const</span> vec &dt ) = 0; |
|---|
| 761 | <a name="l01089"></a>01089 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#1dee3fddaf021e62d925289660a707dc" title="Batch Bayes rule (columns of Dt are observations).">bayesB</a> ( <span class="keyword">const</span> mat &Dt ); |
|---|
| 762 | <a name="l01092"></a><a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">01092</a> <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">logpred</a> ( <span class="keyword">const</span> vec &dt )<span class="keyword"> const </span>{ |
|---|
| 763 | <a name="l01093"></a>01093 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 764 | <a name="l01094"></a>01094 <span class="keywordflow">return</span> 0.0; |
|---|
| 765 | <a name="l01095"></a>01095 } |
|---|
| 766 | <a name="l01096"></a>01096 |
|---|
| 767 | <a name="l01098"></a><a class="code" href="classbdm_1_1BM.html#0e8ebe61fb14990abe1254bd3dda5fae">01098</a> vec <a class="code" href="classbdm_1_1BM.html#0e8ebe61fb14990abe1254bd3dda5fae" title="Matrix version of logpred.">logpred_m</a> ( <span class="keyword">const</span> mat &dt )<span class="keyword"> const </span>{ |
|---|
| 768 | <a name="l01099"></a>01099 vec tmp ( dt.cols() ); |
|---|
| 769 | <a name="l01100"></a>01100 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = 0; i < dt.cols(); i++ ) { |
|---|
| 770 | <a name="l01101"></a>01101 tmp ( i ) = <a class="code" href="classbdm_1_1BM.html#50257e0c1e5b5c73153ea6e716ad8ae0">logpred</a> ( dt.get_col ( i ) ); |
|---|
| 771 | <a name="l01102"></a>01102 } |
|---|
| 772 | <a name="l01103"></a>01103 <span class="keywordflow">return</span> tmp; |
|---|
| 773 | <a name="l01104"></a>01104 } |
|---|
| 774 | <a name="l01105"></a>01105 |
|---|
| 775 | <a name="l01107"></a><a class="code" href="classbdm_1_1BM.html#688d7a2aced1e06aa1c468d73a9e5eba">01107</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a>* <a class="code" href="classbdm_1_1BM.html#688d7a2aced1e06aa1c468d73a9e5eba" title="Constructs a predictive density .">epredictor</a>()<span class="keyword"> const </span>{ |
|---|
| 776 | <a name="l01108"></a>01108 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 777 | <a name="l01109"></a>01109 <span class="keywordflow">return</span> NULL; |
|---|
| 778 | <a name="l01110"></a>01110 }; |
|---|
| 779 | <a name="l01112"></a><a class="code" href="classbdm_1_1BM.html#598b25e3f3d96a5bc00a5faeb5b3c912">01112</a> <span class="keyword">virtual</span> <a class="code" href="classbdm_1_1mpdf.html" title="Conditional probability density, e.g. modeling , where is random variable, rv, and...">mpdf</a>* <a class="code" href="classbdm_1_1BM.html#598b25e3f3d96a5bc00a5faeb5b3c912" title="Constructs conditional density of 1-step ahead predictor .">predictor</a>()<span class="keyword"> const </span>{ |
|---|
| 780 | <a name="l01113"></a>01113 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented"</span> ); |
|---|
| 781 | <a name="l01114"></a>01114 <span class="keywordflow">return</span> NULL; |
|---|
| 782 | <a name="l01115"></a>01115 }; |
|---|
| 783 | <a name="l01117"></a>01117 |
|---|
| 784 | <a name="l01122"></a>01122 |
|---|
| 785 | <a name="l01124"></a><a class="code" href="classbdm_1_1BM.html#de95c590d650b2db423d53992f0906cb">01124</a> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1BM.html#de95c590d650b2db423d53992f0906cb" title="Name of extension variable.">rvc</a>; |
|---|
| 786 | <a name="l01126"></a><a class="code" href="classbdm_1_1BM.html#b5e8e016be16e4029c789063cb3f3b33">01126</a> <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& <a class="code" href="classbdm_1_1BM.html#b5e8e016be16e4029c789063cb3f3b33" title="access function">_rvc</a>()<span class="keyword"> const </span>{ |
|---|
| 787 | <a name="l01127"></a>01127 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1BM.html#de95c590d650b2db423d53992f0906cb" title="Name of extension variable.">rvc</a>; |
|---|
| 788 | <a name="l01128"></a>01128 } |
|---|
| 789 | <a name="l01129"></a>01129 |
|---|
| 790 | <a name="l01131"></a><a class="code" href="classbdm_1_1BM.html#6799f4b16a6a59ed58b1d0d6e17116f4">01131</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#6799f4b16a6a59ed58b1d0d6e17116f4" title="Substitute val for rvc.">condition</a> ( <span class="keyword">const</span> vec &val ) { |
|---|
| 791 | <a name="l01132"></a>01132 <a class="code" href="bdmerror_8h.html#7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">"Not implemented!"</span> ); |
|---|
| 792 | <a name="l01133"></a>01133 } |
|---|
| 793 | <a name="l01134"></a>01134 |
|---|
| 794 | <a name="l01136"></a>01136 |
|---|
| 795 | <a name="l01137"></a>01137 |
|---|
| 796 | <a name="l01140"></a>01140 |
|---|
| 797 | <a name="l01141"></a>01141 <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>& _drv()<span class="keyword"> const </span>{ |
|---|
| 798 | <a name="l01142"></a>01142 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a>; |
|---|
| 799 | <a name="l01143"></a>01143 } |
|---|
| 800 | <a name="l01144"></a>01144 <span class="keywordtype">void</span> set_drv ( <span class="keyword">const</span> RV &rv ) { |
|---|
| 801 | <a name="l01145"></a>01145 <a class="code" href="classbdm_1_1BM.html#c400357e37d27a4834b2b1d9211009ed" title="Random variable of the data (optional).">drv</a> = rv; |
|---|
| 802 | <a name="l01146"></a>01146 } |
|---|
| 803 | <a name="l01147"></a>01147 <span class="keywordtype">void</span> set_rv ( <span class="keyword">const</span> RV &rv ) { |
|---|
| 804 | <a name="l01148"></a>01148 <span class="keyword">const_cast<</span>epdf&<span class="keyword">></span> ( posterior() ).set_rv ( rv ); |
|---|
| 805 | <a name="l01149"></a>01149 } |
|---|
| 806 | <a name="l01150"></a>01150 <span class="keywordtype">double</span> _ll()<span class="keyword"> const </span>{ |
|---|
| 807 | <a name="l01151"></a>01151 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a>; |
|---|
| 808 | <a name="l01152"></a>01152 } |
|---|
| 809 | <a name="l01153"></a>01153 <span class="keywordtype">void</span> set_evalll ( <span class="keywordtype">bool</span> evl0 ) { |
|---|
| 810 | <a name="l01154"></a>01154 <a class="code" href="classbdm_1_1BM.html#faff0ad12556fe7dc0e2807d4fd938ee" title="If true, the filter will compute likelihood of the data record and store it in ll...">evalll</a> = evl0; |
|---|
| 811 | <a name="l01155"></a>01155 } |
|---|
| 812 | <a name="l01156"></a>01156 <span class="keyword">virtual</span> <span class="keyword">const</span> epdf& posterior() <span class="keyword">const</span> = 0; |
|---|
| 813 | <a name="l01158"></a>01158 |
|---|
| 814 | <a name="l01161"></a>01161 |
|---|
| 815 | <a name="l01163"></a><a class="code" href="classbdm_1_1BM.html#adb539fa2585c8a2a91c54e5aebf330e">01163</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#adb539fa2585c8a2a91c54e5aebf330e" title="Set boolean options from a string, recognized are: &quot;logbounds,logll&quot;.">set_options</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &opt ) { |
|---|
| 816 | <a name="l01164"></a>01164 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 0 ) = 1; |
|---|
| 817 | <a name="l01165"></a>01165 <span class="keywordflow">if</span> ( opt.find ( <span class="stringliteral">"logbounds"</span> ) != string::npos ) { |
|---|
| 818 | <a name="l01166"></a>01166 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 1 ) = 1; |
|---|
| 819 | <a name="l01167"></a>01167 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 2 ) = 1; |
|---|
| 820 | <a name="l01168"></a>01168 } |
|---|
| 821 | <a name="l01169"></a>01169 <span class="keywordflow">if</span> ( opt.find ( <span class="stringliteral">"logll"</span> ) != string::npos ) { |
|---|
| 822 | <a name="l01170"></a>01170 <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 3 ) = 1; |
|---|
| 823 | <a name="l01171"></a>01171 } |
|---|
| 824 | <a name="l01172"></a>01172 } |
|---|
| 825 | <a name="l01174"></a><a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca">01174</a> ivec <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a>; |
|---|
| 826 | <a name="l01175"></a>01175 |
|---|
| 827 | <a name="l01177"></a><a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207">01177</a> ivec <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a>; |
|---|
| 828 | <a name="l01179"></a><a class="code" href="classbdm_1_1BM.html#2298ca6af9b13a78a4c9e18ab43f1827">01179</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#2298ca6af9b13a78a4c9e18ab43f1827" title="Add all logged variables to a logger.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L, <span class="keyword">const</span> <span class="keywordtype">string</span> &name = <span class="stringliteral">""</span> ) { |
|---|
| 829 | <a name="l01180"></a>01180 <span class="comment">// internal</span> |
|---|
| 830 | <a name="l01181"></a>01181 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> r; |
|---|
| 831 | <a name="l01182"></a>01182 <span class="keywordflow">if</span> ( posterior().isnamed() ) { |
|---|
| 832 | <a name="l01183"></a>01183 r = posterior().<a class="code" href="classbdm_1_1epdf.html#a4ab378d5e004c3ff3e2d4e64f7bba21" title="Return name (fails when isnamed is false).">_rv</a>(); |
|---|
| 833 | <a name="l01184"></a>01184 } <span class="keywordflow">else</span> { |
|---|
| 834 | <a name="l01185"></a>01185 r = <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">"est"</span>, posterior().dimension() ); |
|---|
| 835 | <a name="l01186"></a>01186 }; |
|---|
| 836 | <a name="l01187"></a>01187 |
|---|
| 837 | <a name="l01188"></a>01188 <span class="comment">// Add mean value</span> |
|---|
| 838 | <a name="l01189"></a>01189 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 0 ) ) <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 0 ) = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( r, name + <span class="stringliteral">"mean_"</span> ); |
|---|
| 839 | <a name="l01190"></a>01190 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 1 ) ) <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 1 ) = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( r, name + <span class="stringliteral">"lb_"</span> ); |
|---|
| 840 | <a name="l01191"></a>01191 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 2 ) ) <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 2 ) = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( r, name + <span class="stringliteral">"ub_"</span> ); |
|---|
| 841 | <a name="l01192"></a>01192 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 3 ) ) <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 3 ) = L.<a class="code" href="classbdm_1_1logger.html#47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">"ll"</span>, 1 ), name ); <span class="comment">//TODO: "local" RV</span> |
|---|
| 842 | <a name="l01193"></a>01193 } |
|---|
| 843 | <a name="l01194"></a>01194 <span class="keyword">virtual</span> <span class="keywordtype">void</span> logit ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &L ) { |
|---|
| 844 | <a name="l01195"></a>01195 L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 0 ), posterior().mean() ); |
|---|
| 845 | <a name="l01196"></a>01196 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 1 ) || <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 2 ) ) { <span class="comment">//if one of them is off, its LID==-1 and will not be stored</span> |
|---|
| 846 | <a name="l01197"></a>01197 vec ub, lb; |
|---|
| 847 | <a name="l01198"></a>01198 posterior().<a class="code" href="classbdm_1_1epdf.html#0a7705e80601957f7226d333a0a6d539" title="Lower and upper bounds of percentage % quantile, returns mean-2*sigma as default...">qbounds</a> ( lb, ub ); |
|---|
| 848 | <a name="l01199"></a>01199 L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 1 ), lb ); |
|---|
| 849 | <a name="l01200"></a>01200 L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 2 ), ub ); |
|---|
| 850 | <a name="l01201"></a>01201 } |
|---|
| 851 | <a name="l01202"></a>01202 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1BM.html#398b7e7a162cf37d0022d6126495f207" title="Flags for logging - same size as LIDs, each entry correspond to the same in LIDs...">LFlags</a> ( 3 ) ) L.<a class="code" href="classbdm_1_1logger.html#e30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1BM.html#109c1a626a69031658e3a44e9e500cca" title="IDs of storages in loggers 4:[1=mean,2=lb,3=ub,4=ll].">LIDs</a> ( 3 ), <a class="code" href="classbdm_1_1BM.html#4064b6559d962633e4372b12f4cd204a" title="Logarithm of marginalized data likelihood.">ll</a> ); |
|---|
| 852 | <a name="l01203"></a>01203 } |
|---|
| 853 | <a name="l01205"></a><a class="code" href="classbdm_1_1BM.html#23c6a8f71f922023ab08dcb0487a86de">01205</a> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1BM.html#23c6a8f71f922023ab08dcb0487a86de" title="This method arrange instance properties according the data stored in the Setting...">from_setting</a> ( <span class="keyword">const</span> Setting &<span class="keyword">set</span> ) { |
|---|
| 854 | <a name="l01206"></a>01206 <a class="code" href="classbdm_1_1shared__ptr.html" title="A naive implementation of roughly a subset of the std::tr1::shared_ptr spec.">shared_ptr<RV></a> r = UI::build<RV> ( <span class="keyword">set</span>, <span class="stringliteral">"drv"</span>, UI::optional ); |
|---|
| 855 | <a name="l01207"></a>01207 <span class="keywordflow">if</span> ( r ) { |
|---|
| 856 | <a name="l01208"></a>01208 set_drv ( *r ); |
|---|
| 857 | <a name="l01209"></a>01209 } |
|---|
| 858 | <a name="l01210"></a>01210 <span class="keywordtype">string</span> opt; |
|---|
| 859 | <a name="l01211"></a>01211 <span class="keywordflow">if</span> ( !<a class="code" href="classbdm_1_1UI.html#cd1667e6fec99ec64dabcb3ca2ff922d">UI::get</a> ( opt, <span class="keyword">set</span>, <span class="stringliteral">"options"</span>, UI::optional ) ) { |
|---|
| 860 | <a name="l01212"></a>01212 <a class="code" href="classbdm_1_1BM.html#adb539fa2585c8a2a91c54e5aebf330e" title="Set boolean options from a string, recognized are: &quot;logbounds,logll&quot;.">set_options</a> ( opt ); |
|---|
| 861 | <a name="l01213"></a>01213 } |
|---|
| 862 | <a name="l01214"></a>01214 } |
|---|
| 863 | <a name="l01215"></a>01215 |
|---|
| 864 | <a name="l01216"></a>01216 }; |
|---|
| 865 | <a name="l01217"></a>01217 |
|---|
| 866 | <a name="l01218"></a>01218 <span class="keyword">typedef</span> Array<shared_ptr<epdf> > epdf_array; |
|---|
| 867 | <a name="l01219"></a>01219 |
|---|
| 868 | <a name="l01220"></a>01220 <span class="keyword">typedef</span> Array<shared_ptr<mpdf> > mpdf_array; |
|---|
| 869 | <a name="l01221"></a>01221 |
|---|
| 870 | <a name="l01222"></a>01222 <span class="keyword">template</span><<span class="keyword">class</span> EPDF> |
|---|
| 871 | <a name="l01223"></a><a class="code" href="classbdm_1_1mpdf__internal.html#d8e547695d1cc19219b91164d825c930">01223</a> vec <a class="code" href="classbdm_1_1mpdf__internal.html#d8e547695d1cc19219b91164d825c930" title="Reimplements samplecond using condition().">mpdf_internal<EPDF>::samplecond</a> ( <span class="keyword">const</span> vec &cond ) { |
|---|
| 872 | <a name="l01224"></a>01224 <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( cond ); |
|---|
| 873 | <a name="l01225"></a>01225 vec temp = <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>.sample(); |
|---|
| 874 | <a name="l01226"></a>01226 <span class="keywordflow">return</span> temp; |
|---|
| 875 | <a name="l01227"></a>01227 } |
|---|
| 876 | <a name="l01228"></a>01228 |
|---|
| 877 | <a name="l01229"></a>01229 <span class="keyword">template</span><<span class="keyword">class</span> EPDF> |
|---|
| 878 | <a name="l01230"></a><a class="code" href="classbdm_1_1mpdf__internal.html#9554c554054da2d22cb8e908ae9c8823">01230</a> mat <a class="code" href="classbdm_1_1mpdf__internal.html#9554c554054da2d22cb8e908ae9c8823" title="Efficient version of samplecond.">mpdf_internal<EPDF>::samplecond_m</a> ( <span class="keyword">const</span> vec &cond, <span class="keywordtype">int</span> N ) { |
|---|
| 879 | <a name="l01231"></a>01231 <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( cond ); |
|---|
| 880 | <a name="l01232"></a>01232 mat temp ( dimension(), N ); |
|---|
| 881 | <a name="l01233"></a>01233 vec smp ( dimension() ); |
|---|
| 882 | <a name="l01234"></a>01234 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = 0; i < N; i++ ) { |
|---|
| 883 | <a name="l01235"></a>01235 smp = <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>.sample(); |
|---|
| 884 | <a name="l01236"></a>01236 temp.set_col ( i, smp ); |
|---|
| 885 | <a name="l01237"></a>01237 } |
|---|
| 886 | <a name="l01238"></a>01238 |
|---|
| 887 | <a name="l01239"></a>01239 <span class="keywordflow">return</span> temp; |
|---|
| 888 | <a name="l01240"></a>01240 } |
|---|
| 889 | <a name="l01241"></a>01241 |
|---|
| 890 | <a name="l01242"></a>01242 <span class="keyword">template</span><<span class="keyword">class</span> EPDF> |
|---|
| 891 | <a name="l01243"></a><a class="code" href="classbdm_1_1mpdf__internal.html#89076e62b8d7df7616bad68c94591948">01243</a> <span class="keywordtype">double</span> <a class="code" href="classbdm_1_1mpdf__internal.html#89076e62b8d7df7616bad68c94591948" title="Reimplements evallogcond using condition().">mpdf_internal<EPDF>::evallogcond</a> ( <span class="keyword">const</span> vec &dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 892 | <a name="l01244"></a>01244 <span class="keywordtype">double</span> tmp; |
|---|
| 893 | <a name="l01245"></a>01245 <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( cond ); |
|---|
| 894 | <a name="l01246"></a>01246 tmp = <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>.evallog ( dt ); |
|---|
| 895 | <a name="l01247"></a>01247 <span class="keywordflow">return</span> tmp; |
|---|
| 896 | <a name="l01248"></a>01248 } |
|---|
| 897 | <a name="l01249"></a>01249 |
|---|
| 898 | <a name="l01250"></a>01250 <span class="keyword">template</span><<span class="keyword">class</span> EPDF> |
|---|
| 899 | <a name="l01251"></a><a class="code" href="classbdm_1_1mpdf__internal.html#e28c214e3063733a6e4d17738941c61c">01251</a> vec <a class="code" href="classbdm_1_1mpdf__internal.html#e28c214e3063733a6e4d17738941c61c" title="Efficient version of evallogcond for matrices.">mpdf_internal<EPDF>::evallogcond_m</a> ( <span class="keyword">const</span> mat &Dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 900 | <a name="l01252"></a>01252 <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( cond ); |
|---|
| 901 | <a name="l01253"></a>01253 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>.evallog_m ( Dt ); |
|---|
| 902 | <a name="l01254"></a>01254 } |
|---|
| 903 | <a name="l01255"></a>01255 |
|---|
| 904 | <a name="l01256"></a>01256 <span class="keyword">template</span><<span class="keyword">class</span> EPDF> |
|---|
| 905 | <a name="l01257"></a><a class="code" href="classbdm_1_1mpdf__internal.html#e82db07ce8af02f29cfd81e014edb3db">01257</a> vec <a class="code" href="classbdm_1_1mpdf__internal.html#e28c214e3063733a6e4d17738941c61c" title="Efficient version of evallogcond for matrices.">mpdf_internal<EPDF>::evallogcond_m</a> ( <span class="keyword">const</span> Array<vec> &Dt, <span class="keyword">const</span> vec &cond ) { |
|---|
| 906 | <a name="l01258"></a>01258 <a class="code" href="classbdm_1_1mpdf__internal.html#1ac61da081667fc54bcd050cc4f6a93e" title="Update iepdf so that it represents this mpdf conditioned on rvc = cond This function...">condition</a> ( cond ); |
|---|
| 907 | <a name="l01259"></a>01259 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1mpdf__internal.html#47bab632af15120c88aad647ae129468" title="Internal epdf used for sampling.">iepdf</a>.evallog_m ( Dt ); |
|---|
| 908 | <a name="l01260"></a>01260 } |
|---|
| 909 | <a name="l01261"></a>01261 |
|---|
| 910 | <a name="l01262"></a>01262 }; <span class="comment">//namespace</span> |
|---|
| 911 | <a name="l01263"></a>01263 <span class="preprocessor">#endif // BDMBASE_H</span> |
|---|
| 912 | </pre></div></div> |
|---|
| 913 | <hr size="1"><address style="text-align: right;"><small>Generated on Wed Oct 7 17:34:42 2009 for mixpp by |
|---|
| 914 | <a href="http://www.doxygen.org/index.html"> |
|---|
| 915 | <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.9 </small></address> |
|---|
| 916 | </body> |
|---|
| 917 | </html> |
|---|
