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[608]5<title>mixpp: bdm::mexEpdf Class Reference</title>
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[259]52<div class="navigation" id="top">
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[271]55      <li><a href="main.html"><span>Main&nbsp;Page</span></a></li>
[259]56      <li><a href="pages.html"><span>Related&nbsp;Pages</span></a></li>
[290]57      <li class="current"><a href="annotated.html"><span>Classes</span></a></li>
[259]58      <li><a href="files.html"><span>Files</span></a></li>
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62    <ul>
63      <li><a href="annotated.html"><span>Class&nbsp;List</span></a></li>
[290]64      <li><a href="classes.html"><span>Class&nbsp;Index</span></a></li>
[259]65      <li><a href="hierarchy.html"><span>Class&nbsp;Hierarchy</span></a></li>
66      <li><a href="functions.html"><span>Class&nbsp;Members</span></a></li>
67    </ul>
68  </div>
[608]69  <div class="navpath"><b>bdm</b>::<a class="el" href="classbdm_1_1mexEpdf.html">mexEpdf</a>
[259]70  </div>
71</div>
72<div class="contents">
[608]73<h1>bdm::mexEpdf Class Reference</h1><!-- doxytag: class="bdm::mexEpdf" --><!-- doxytag: inherits="bdm::epdf" -->
74<p><a href="classbdm_1_1mexEpdf-members.html">List of all members.</a></p>
[591]75<table border="0" cellpadding="0" cellspacing="0">
76<tr><td colspan="2"><h2>Public Member Functions</h2></td></tr>
[608]77<tr><td class="memItemLeft" align="right" valign="top">void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1mexEpdf.html#af371482ea8d21c8ac01f011b3d942298">from_setting</a> (const Setting &amp;S)</td></tr>
78<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Load from structure with elements:.  <a href="#af371482ea8d21c8ac01f011b3d942298"></a><br/></td></tr>
79<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a028dd3432d55e1fcc49f786a27f5afe8"></a><!-- doxytag: member="bdm::mexEpdf::mean" ref="a028dd3432d55e1fcc49f786a27f5afe8" args="() const " -->
80vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1mexEpdf.html#a028dd3432d55e1fcc49f786a27f5afe8">mean</a> () const </td></tr>
81<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">return expected value <br/></td></tr>
82<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="aaf0e6941ba5919cae1bc530e2181b109"></a><!-- doxytag: member="bdm::mexEpdf::to_string" ref="aaf0e6941ba5919cae1bc530e2181b109" args="()" -->
[591]83virtual string&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1root.html#aaf0e6941ba5919cae1bc530e2181b109">to_string</a> ()</td></tr>
84<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">This method returns a basic info about the current instance. <br/></td></tr>
[608]85<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a67d954d255ede776eade7334d4895790"></a><!-- doxytag: member="bdm::mexEpdf::to_setting" ref="a67d954d255ede776eade7334d4895790" args="(Setting &amp;set) const " -->
[591]86virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1root.html#a67d954d255ede776eade7334d4895790">to_setting</a> (Setting &amp;set) const </td></tr>
87<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">This method save all the instance properties into the Setting structure. <br/></td></tr>
[608]88<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a1c314bd6d6dacb8ba78ea5eb88fd9516"></a><!-- doxytag: member="bdm::mexEpdf::validate" ref="a1c314bd6d6dacb8ba78ea5eb88fd9516" args="()" -->
[591]89virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1root.html#a1c314bd6d6dacb8ba78ea5eb88fd9516">validate</a> ()</td></tr>
90<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">This method TODO. <br/></td></tr>
[270]91<tr><td colspan="2"><div class="groupHeader">Constructors</div></td></tr>
[591]92<tr><td colspan="2"><div class="groupText"><p><a class="anchor" id="amgrp559a25fdb98a7d1fd1c3771ac568d5e9"></a> Construction of each <a class="el" href="classbdm_1_1epdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> should support two types of constructors: </p>
93<ul>
[270]94<li>empty constructor, </li>
[271]95<li>copy constructor,</li>
[270]96</ul>
[591]97<p>The following constructors should be supported for convenience: </p>
98<ul>
[271]99<li>constructor followed by calling <code>set_parameters()</code> </li>
[591]100<li>constructor accepting random variables calling <code><a class="el" href="classbdm_1_1epdf.html#af423e28448dbb69ef4905295ec8de8ff" title="Name its rv.">set_rv()</a></code> </li>
[271]101</ul>
[591]102<p>All internal data structures are constructed as empty. Their values (including sizes) will be set by method <code>set_parameters()</code>. This way references can be initialized in constructors. </p>
103<br/><br/></div></td></tr>
[608]104<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a840de94aa33cf4f2ebd2427f45a165d8"></a><!-- doxytag: member="bdm::mexEpdf::set_parameters" ref="a840de94aa33cf4f2ebd2427f45a165d8" args="(int dim0)" -->
[271]105void&nbsp;</td><td class="memItemRight" valign="bottom"><b>set_parameters</b> (int dim0)</td></tr>
[270]106<tr><td colspan="2"><div class="groupHeader">Matematical Operations</div></td></tr>
[591]107<tr><td colspan="2"><div class="groupText"><p><a class="anchor" id="amgrp96552c993870a5dd6bb0ea321f1ceb78"></a> </p>
108<br/><br/></div></td></tr>
[608]109<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a75ba57a89681a8efec488f5796c7cc1b"></a><!-- doxytag: member="bdm::mexEpdf::sample" ref="a75ba57a89681a8efec488f5796c7cc1b" args="() const " -->
[591]110virtual vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a75ba57a89681a8efec488f5796c7cc1b">sample</a> () const </td></tr>
[608]111<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Returns a sample, <img class="formulaInl" alt="$ x $" src="form_3.png"/> from density <img class="formulaInl" alt="$ f_x()$" src="form_13.png"/>. <br/></td></tr>
112<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ab4cf45fd83cc7573ede9fe1215256058"></a><!-- doxytag: member="bdm::mexEpdf::sample_m" ref="ab4cf45fd83cc7573ede9fe1215256058" args="(int N) const " -->
[591]113virtual mat&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#ab4cf45fd83cc7573ede9fe1215256058">sample_m</a> (int N) const </td></tr>
[608]114<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Returns N samples, <img class="formulaInl" alt="$ [x_1 , x_2 , \ldots \ $" src="form_14.png"/> from density <img class="formulaInl" alt="$ f_x(rv)$" src="form_15.png"/>. <br/></td></tr>
115<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="adeab266d63c236c277538867d5c3f249"></a><!-- doxytag: member="bdm::mexEpdf::evallog" ref="adeab266d63c236c277538867d5c3f249" args="(const vec &amp;val) const " -->
116virtual double&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#adeab266d63c236c277538867d5c3f249">evallog</a> (const vec &amp;val) const </td></tr>
117<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Compute log-probability of argument <code>val</code> In case the argument is out of suport return -Infinity. <br/></td></tr>
118<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ad08b68a5abd461f1b6519597e344caf8"></a><!-- doxytag: member="bdm::mexEpdf::evallog_m" ref="ad08b68a5abd461f1b6519597e344caf8" args="(const mat &amp;Val) const " -->
[591]119virtual vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#ad08b68a5abd461f1b6519597e344caf8">evallog_m</a> (const mat &amp;Val) const </td></tr>
120<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Compute log-probability of multiple values argument <code>val</code>. <br/></td></tr>
[608]121<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a9bc02dae61584138443baf6b1cbc1ac9"></a><!-- doxytag: member="bdm::mexEpdf::evallog_m" ref="a9bc02dae61584138443baf6b1cbc1ac9" args="(const Array&lt; vec &gt; &amp;Avec) const " -->
[591]122virtual vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a9bc02dae61584138443baf6b1cbc1ac9">evallog_m</a> (const Array&lt; vec &gt; &amp;Avec) const </td></tr>
123<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Compute log-probability of multiple values argument <code>val</code>. <br/></td></tr>
[608]124<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a1499d35b79bce0cfa64fc5cafb9c03b2"></a><!-- doxytag: member="bdm::mexEpdf::condition" ref="a1499d35b79bce0cfa64fc5cafb9c03b2" args="(const RV &amp;rv) const " -->
[591]125virtual <a class="el" href="classbdm_1_1shared__ptr.html">shared_ptr</a>&lt; <a class="el" href="classbdm_1_1mpdf.html">mpdf</a> &gt;&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a1499d35b79bce0cfa64fc5cafb9c03b2">condition</a> (const <a class="el" href="classbdm_1_1RV.html">RV</a> &amp;<a class="el" href="classbdm_1_1epdf.html#a62c5b8ff71d9ebe6cd58d3c342eb1dc8">rv</a>) const </td></tr>
126<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Return conditional density on the given <a class="el" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>, the remaining rvs will be in conditioning. <br/></td></tr>
[608]127<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="aa84b05f5293cab2aeb4e07faffa60906"></a><!-- doxytag: member="bdm::mexEpdf::marginal" ref="aa84b05f5293cab2aeb4e07faffa60906" args="(const RV &amp;rv) const " -->
[591]128virtual <a class="el" href="classbdm_1_1shared__ptr.html">shared_ptr</a>&lt; <a class="el" href="classbdm_1_1epdf.html">epdf</a> &gt;&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#aa84b05f5293cab2aeb4e07faffa60906">marginal</a> (const <a class="el" href="classbdm_1_1RV.html">RV</a> &amp;<a class="el" href="classbdm_1_1epdf.html#a62c5b8ff71d9ebe6cd58d3c342eb1dc8">rv</a>) const </td></tr>
129<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Return marginal density on the given <a class="el" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>, the remainig rvs are intergrated out. <br/></td></tr>
[608]130<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a4543d40ccfc5d549b0c831a57a3ed84c"></a><!-- doxytag: member="bdm::mexEpdf::variance" ref="a4543d40ccfc5d549b0c831a57a3ed84c" args="() const " -->
[591]131virtual vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a4543d40ccfc5d549b0c831a57a3ed84c">variance</a> () const </td></tr>
132<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">return expected variance (not covariance!) <br/></td></tr>
[608]133<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a0a7705e80601957f7226d333a0a6d539"></a><!-- doxytag: member="bdm::mexEpdf::qbounds" ref="a0a7705e80601957f7226d333a0a6d539" args="(vec &amp;lb, vec &amp;ub, double percentage=0.95) const " -->
[591]134virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a0a7705e80601957f7226d333a0a6d539">qbounds</a> (vec &amp;lb, vec &amp;ub, double percentage=0.95) const </td></tr>
135<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Lower and upper bounds of <code>percentage</code> % quantile, returns mean-2*sigma as default. <br/></td></tr>
[270]136<tr><td colspan="2"><div class="groupHeader">Connection to other classes</div></td></tr>
[608]137<tr><td colspan="2"><div class="groupText"><p><a class="anchor" id="amgrp14fc6e1cb822e9dfc5edc16c20fabe11"></a>Description of the random quantity via attribute <code>rv</code> is optional. For operations such as sampling <code>rv</code> does not need to be set. However, for <code>marginalization</code> and <code>conditioning</code> <code>rv</code> has to be set. NB: </p>
[591]138<br/><br/></div></td></tr>
[608]139<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="af423e28448dbb69ef4905295ec8de8ff"></a><!-- doxytag: member="bdm::mexEpdf::set_rv" ref="af423e28448dbb69ef4905295ec8de8ff" args="(const RV &amp;rv0)" -->
[591]140void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#af423e28448dbb69ef4905295ec8de8ff">set_rv</a> (const <a class="el" href="classbdm_1_1RV.html">RV</a> &amp;rv0)</td></tr>
141<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Name its rv. <br/></td></tr>
[608]142<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ac4b863ff84c7a4882fb3ad18556027f9"></a><!-- doxytag: member="bdm::mexEpdf::isnamed" ref="ac4b863ff84c7a4882fb3ad18556027f9" args="() const " -->
[591]143bool&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#ac4b863ff84c7a4882fb3ad18556027f9">isnamed</a> () const </td></tr>
144<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">True if rv is assigned. <br/></td></tr>
[608]145<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="aa4ab378d5e004c3ff3e2d4e64f7bba21"></a><!-- doxytag: member="bdm::mexEpdf::_rv" ref="aa4ab378d5e004c3ff3e2d4e64f7bba21" args="() const " -->
[591]146const <a class="el" href="classbdm_1_1RV.html">RV</a> &amp;&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#aa4ab378d5e004c3ff3e2d4e64f7bba21">_rv</a> () const </td></tr>
147<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Return name (fails when isnamed is false). <br/></td></tr>
[270]148<tr><td colspan="2"><div class="groupHeader">Access to attributes</div></td></tr>
[591]149<tr><td colspan="2"><div class="groupText"><p><a class="anchor" id="amgrpb6eb094f9e6af11f8a7d9efa9d8e3623"></a> </p>
150<br/><br/></div></td></tr>
[608]151<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a7083a65f7b7a0d0d13b2c516bd2ec29c"></a><!-- doxytag: member="bdm::mexEpdf::dimension" ref="a7083a65f7b7a0d0d13b2c516bd2ec29c" args="() const " -->
[591]152int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a7083a65f7b7a0d0d13b2c516bd2ec29c">dimension</a> () const </td></tr>
153<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Size of the random variable. <br/></td></tr>
154<tr><td colspan="2"><h2>Protected Attributes</h2></td></tr>
[608]155<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a287414259db205e5bc82c0023c09e633"></a><!-- doxytag: member="bdm::mexEpdf::name" ref="a287414259db205e5bc82c0023c09e633" args="" -->
156string&nbsp;</td><td class="memItemRight" valign="bottom"><b>name</b></td></tr>
157<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a5190ab6b434834d4efdecaa7c264df67"></a><!-- doxytag: member="bdm::mexEpdf::data" ref="a5190ab6b434834d4efdecaa7c264df67" args="" -->
158mxArray *&nbsp;</td><td class="memItemRight" valign="bottom"><b>data</b></td></tr>
159<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a16adac20ec7fe07e1ea0b27d917788ce"></a><!-- doxytag: member="bdm::mexEpdf::dim" ref="a16adac20ec7fe07e1ea0b27d917788ce" args="" -->
[591]160int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a16adac20ec7fe07e1ea0b27d917788ce">dim</a></td></tr>
161<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">dimension of the random variable <br/></td></tr>
[608]162<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a62c5b8ff71d9ebe6cd58d3c342eb1dc8"></a><!-- doxytag: member="bdm::mexEpdf::rv" ref="a62c5b8ff71d9ebe6cd58d3c342eb1dc8" args="" -->
[591]163<a class="el" href="classbdm_1_1RV.html">RV</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1epdf.html#a62c5b8ff71d9ebe6cd58d3c342eb1dc8">rv</a></td></tr>
164<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Description of the random variable. <br/></td></tr>
[259]165</table>
[591]166<hr/><h2>Member Function Documentation</h2>
[608]167<a class="anchor" id="af371482ea8d21c8ac01f011b3d942298"></a><!-- doxytag: member="bdm::mexEpdf::from_setting" ref="af371482ea8d21c8ac01f011b3d942298" args="(const Setting &amp;S)" -->
[472]168<div class="memitem">
169<div class="memproto">
170      <table class="memname">
171        <tr>
[608]172          <td class="memname">void bdm::mexEpdf::from_setting </td>
[472]173          <td>(</td>
[396]174          <td class="paramtype">const Setting &amp;&nbsp;</td>
[591]175          <td class="paramname"> <em>set</em></td>
[396]176          <td>&nbsp;)&nbsp;</td>
177          <td><code> [inline, virtual]</code></td>
178        </tr>
179      </table>
[259]180</div>
[396]181<div class="memdoc">
[608]182
183<p>Load from structure with elements:. </p>
184<div class="fragment"><pre class="fragment">         { <a class="code" href="classbdm_1_1epdf.html#a62c5b8ff71d9ebe6cd58d3c342eb1dc8" title="Description of the random variable.">rv</a> = {<span class="keyword">class</span>=<span class="stringliteral">&quot;RV&quot;</span>, names=(...),}; <span class="comment">// RV describing meaning of random variable</span>
185           <span class="comment">// elements of offsprings</span>
186         }
[396]187</pre></div> 
[608]188<p>Reimplemented from <a class="el" href="classbdm_1_1epdf.html#afa9efc98a065b31c630fe18cc418f725">bdm::epdf</a>.</p>
[396]189
[608]190<p>References <a class="el" href="config2mxstruct_8h_source.html#l00017">UImxConfig::mxconfig</a>.</p>
[396]191
[608]192<p>Referenced by <a class="el" href="mex__BM_8h_source.html#l00055">bdm::mexBM::from_setting()</a>.</p>
[396]193
194</div>
[397]195</div>
[608]196<hr/>The documentation for this class was generated from the following file:<ul>
197<li><a class="el" href="mex__BM_8h_source.html">mex_BM.h</a></li>
[591]198</ul>
199</div>
[621]200<hr size="1"/><address style="text-align: right;"><small>Generated on Wed Sep 16 22:33:34 2009 for mixpp by&nbsp;
[259]201<a href="http://www.doxygen.org/index.html">
[591]202<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>
[259]203</body>
204</html>
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