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# work/git/mixpp/bdm/stat/libBM.h

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    00001
    00013 #ifndef BM_H
    00014 #define BM_H
    00015
    00016 #include <itpp/itbase.h>
    00017 //#include <std>
    00018
    00019 using namespace itpp;
    00020
    00027 class RV {
    00028 protected:
    00030         int tsize;
    00032         int len;
    00034         ivec ids;
    00036         ivec sizes;
    00038         ivec times;
    00040         Array<std::string> names;
    00041
    00042 private:
    00044         void init ( ivec in_ids, Array<std::string> in_names, ivec in_sizes, ivec in_times );
    00045 public:
    00047         RV ( ivec in_ids, Array<std::string> in_names, ivec in_sizes, ivec in_times );
    00049         RV ( ivec ids );
    00051         RV ();
    00052
    00054         friend std::ostream &operator<< ( std::ostream &os, const RV &rv );
    00055
    00057         int count() const {return tsize;} ;
    00059         int length() const {return len;} ;
    00060
    00061         //TODO why not inline and later??
    00062
    00064         ivec find ( RV rv2 );
    00066         bool equal ( RV rv2 ) const;
    00068         void add ( const RV &rv2 );
    00070         friend RV concat ( const RV &rv1, const RV &rv2 );
    00072         RV subt ( RV rv2 );
    00074         RV subselect ( ivec ind );
    00076         RV operator() ( ivec ind );
    00078         void t ( int delta );
    00080         ivec indexlist();
    00081
    00083         Array<std::string>& _names() {return names;};
    00084
    00086         int id ( int at ) {return ids ( at );};
    00088         int size ( int at ) {return sizes ( at );};
    00090         int time ( int at ) {return times ( at );};
    00092         std::string name ( int at ) {return names ( at );};
    00093 };
    00094
    00095
    00097
    00098 class fnc {
    00099 protected:
    00101         int dimy;
    00102 public:
    00104         fnc ( int dy ) :dimy ( dy ) {};
    00106         virtual vec eval ( const vec &cond ) {
    00107                 return vec ( 0 );
    00108         };
    00109
    00111         int _dimy() const{return dimy;}
    00112
    00114         virtual ~fnc() {};
    00115 };
    00116
    00117
    00119
    00120 class epdf {
    00121 protected:
    00123         RV rv;
    00124 public:
    00126         epdf() :rv ( ivec ( 0 ) ) {};
    00127
    00129         epdf ( const RV &rv0 ) :rv ( rv0 ) {};
    00130
    00132 //      virtual vec moment ( const int order = 1 );
    00134         virtual vec sample () const =0;
    00136         virtual mat sampleN ( int N ) const;
    00138         virtual double eval ( const vec &val ) const {return exp ( this->evalpdflog ( val ) );};
    00139
    00141         virtual double evalpdflog ( const vec &val ) const =0;
    00142
    00144         virtual vec mean() const =0;
    00145
    00147         virtual ~epdf() {};
    00149         RV _rv() const {return rv;}
    00150 };
    00151
    00152
    00154 //TODO Samplecond can be generalized
    00155
    00156 class mpdf {
    00157 protected:
    00159         RV rv;
    00161         RV rvc;
    00163         epdf* ep;
    00164 public:
    00165
    00167 //      virtual fnc moment ( const int order = 1 );
    00169         virtual vec samplecond ( vec &cond, double &ll ) {this->condition ( cond );
    00170         vec temp= ep->sample();
    00171         ll=ep->evalpdflog ( temp );return temp;};
    00173         virtual mat samplecond ( vec &cond, vec &ll, int N ) {
    00174                 this->condition ( cond );
    00175                 mat temp ( rv.count(),N ); vec smp ( rv.count() );
    00176                 for ( int i=0;i<N;i++ ) {smp=ep->sample() ;temp.set_col ( i, smp );ll ( i ) =ep->evalpdflog ( smp );}
    00177                 return temp;
    00178         };
    00180         virtual void condition ( const vec &cond ) {};
    00181
    00183         virtual double evalcond ( const vec &dt, const vec &cond ) {this->condition ( cond );return ep->eval ( dt );};
    00184
    00186         virtual ~mpdf() {};
    00187
    00189         mpdf ( const RV &rv0, const RV &rvc0 ) :rv ( rv0 ),rvc ( rvc0 ) {};
    00191         RV _rvc() {return rvc;}
    00193         epdf& _epdf() {return *ep;}
    00194 };
    00195
    00200 class mepdf : public mpdf {
    00201 public:
    00203         mepdf ( const RV &rv, const RV &rvc, epdf* em ) :mpdf ( rv,rvc ) {ep=em;};
    00204 };
    00205
    00213 class DS {
    00214 protected:
    00216         RV Drv;
    00218         RV Urv; //
    00219 public:
    00221         void getdata ( vec &dt );
    00223         void getdata ( vec &dt, ivec &indeces );
    00225         void write ( vec &ut );
    00227         void write ( vec &ut, ivec &indeces );
    00233         void linkrvs ( RV &drv, RV &urv );
    00234
    00236         void step();
    00237
    00238 };
    00239
    00244 class BM {
    00245 protected:
    00247         RV rv;
    00249         double ll;
    00251         bool evalll;
    00252 public:
    00253
    00255         BM ( const RV &rv0 ) :rv ( rv0 ), ll ( 0 ),evalll ( true ) {//Fixme: test rv
    00256         };
    00257
    00261         virtual void bayes ( const vec &dt ) = 0;
    00263         void bayes ( mat Dt );
    00265         virtual epdf& _epdf() =0;
    00266
    00268         virtual ~BM() {};
    00270         const RV& _rv() const {return rv;}
    00272         double _ll() const {return ll;}
    00273 };
    00274
    00284 class BMcond {
    00285 protected:
    00287         RV rvc;
    00288 public:
    00290         virtual void condition ( const vec &val ) =0;
    00292         BMcond ( RV &rv0 ) :rvc ( rv0 ) {};
    00294         virtual ~BMcond() {};
    00296         const RV& _rvc() const {return rvc;}
    00297 };
    00298
    00299 #endif // BM_H