Index: doc/html/classbdm_1_1ArxDS.html
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--- doc/html/classbdm_1_1ArxDS.html (revision 264)
+++ doc/html/classbdm_1_1ArxDS.html (revision 269)
@@ -46,5 +46,5 @@
 <p><center><img src="classbdm_1_1ArxDS__coll__graph.png" border="0" usemap="#bdm_1_1ArxDS__coll__map" alt="Collaboration graph"></center>
 <map name="bdm_1_1ArxDS__coll__map">
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@@ -81,13 +81,64 @@
 
 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Set parameters of the internal model. <br></td></tr>
-<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="3c9e417d85052396fe74c164857ee67e"></a><!-- doxytag: member="bdm::ArxDS::log_add" ref="3c9e417d85052396fe74c164857ee67e" args="(logger &amp;L)" -->
-virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1DS.html#3c9e417d85052396fe74c164857ee67e">log_add</a> (<a class="el" href="classbdm_1_1logger.html">logger</a> &amp;L)</td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="e7438127de87c5a8128edfa12255b436"></a><!-- doxytag: member="bdm::ArxDS::set_options" ref="e7438127de87c5a8128edfa12255b436" args="(const string &amp;s)" -->
+void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#e7438127de87c5a8128edfa12255b436">set_options</a> (const string &amp;s)</td></tr>
 
-<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Register <a class="el" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> for logging into <a class="el" href="classbdm_1_1logger.html" title="DataLink is a connection between two data vectors Up and Down.">logger</a> L. <br></td></tr>
-<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="e03d2c93cddd5c3a03107ddd3ae999cf"></a><!-- doxytag: member="bdm::ArxDS::logit" ref="e03d2c93cddd5c3a03107ddd3ae999cf" args="(logger &amp;L)" -->
-virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1DS.html#e03d2c93cddd5c3a03107ddd3ae999cf">logit</a> (<a class="el" href="classbdm_1_1logger.html">logger</a> &amp;L)</td></tr>
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">set options from a string <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="64819633a1191fcaa60d0de26ade2e52"></a><!-- doxytag: member="bdm::ArxDS::log_add" ref="64819633a1191fcaa60d0de26ade2e52" args="(logger &amp;L)" -->
+virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#64819633a1191fcaa60d0de26ade2e52">log_add</a> (<a class="el" href="classbdm_1_1logger.html">logger</a> &amp;L)</td></tr>
 
-<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Register <a class="el" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> for logging into <a class="el" href="classbdm_1_1logger.html" title="DataLink is a connection between two data vectors Up and Down.">logger</a> L. <br></td></tr>
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Register <a class="el" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> for logging into <a class="el" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> L. <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="4128f5dc3a04063d62fc7e35635aeb90"></a><!-- doxytag: member="bdm::ArxDS::logit" ref="4128f5dc3a04063d62fc7e35635aeb90" args="(logger &amp;L)" -->
+virtual void&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#4128f5dc3a04063d62fc7e35635aeb90">logit</a> (<a class="el" href="classbdm_1_1logger.html">logger</a> &amp;L)</td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Register <a class="el" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> for logging into <a class="el" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> L. <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="ed2113851294ed96abe60fc3f05aa660"></a><!-- doxytag: member="bdm::ArxDS::_drv" ref="ed2113851294ed96abe60fc3f05aa660" args="() const " -->
+virtual <a class="el" href="classbdm_1_1RV.html">RV</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1DS.html#ed2113851294ed96abe60fc3f05aa660">_drv</a> () const </td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">access function <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="a6a9a375da64c82fc227bda3418a1f33"></a><!-- doxytag: member="bdm::ArxDS::_urv" ref="a6a9a375da64c82fc227bda3418a1f33" args="() const " -->
+const <a class="el" href="classbdm_1_1RV.html">RV</a> &amp;&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1DS.html#a6a9a375da64c82fc227bda3418a1f33">_urv</a> () const </td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">access function <br></td></tr>
 <tr><td colspan="2"><br><h2>Protected Attributes</h2></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="c7b3cc6cd059ff3d7f4462cedff4bdeb"></a><!-- doxytag: member="bdm::ArxDS::Rrv" ref="c7b3cc6cd059ff3d7f4462cedff4bdeb" args="" -->
+<a class="el" href="classbdm_1_1RV.html">RV</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#c7b3cc6cd059ff3d7f4462cedff4bdeb">Rrv</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Rv of the regressor. <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="d910dcb5d0c1132f1cffad2c91348b3f"></a><!-- doxytag: member="bdm::ArxDS::Hrv" ref="d910dcb5d0c1132f1cffad2c91348b3f" args="" -->
+<a class="el" href="classbdm_1_1RV.html">RV</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#d910dcb5d0c1132f1cffad2c91348b3f">Hrv</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Rv of the history (full regressor). <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="a11a3f3fbeea1d17b66b073017964597"></a><!-- doxytag: member="bdm::ArxDS::H" ref="a11a3f3fbeea1d17b66b073017964597" args="" -->
+vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#a11a3f3fbeea1d17b66b073017964597">H</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">History, ordered as <img class="formulaInl" alt="$[y_t, u_t, y_{t-1 }, u_{t-1}, \ldots]$" src="form_103.png">. <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="392b87be85675cb3d55fa4953d671bb5"></a><!-- doxytag: member="bdm::ArxDS::U" ref="392b87be85675cb3d55fa4953d671bb5" args="" -->
+vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#392b87be85675cb3d55fa4953d671bb5">U</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">(future) input <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="b2d7530264499b92c3aa32454b960abe"></a><!-- doxytag: member="bdm::ArxDS::rgr" ref="b2d7530264499b92c3aa32454b960abe" args="" -->
+vec&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#b2d7530264499b92c3aa32454b960abe">rgr</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">temporary variable for regressor <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="1520556e3577db8c72b902e633d68e5a"></a><!-- doxytag: member="bdm::ArxDS::rgrlnk" ref="1520556e3577db8c72b902e633d68e5a" args="" -->
+<a class="el" href="classbdm_1_1datalink__e2e.html">datalink_e2e</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#1520556e3577db8c72b902e633d68e5a">rgrlnk</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">data link: H -&gt; rgr <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="0aa9d8d35792159dc9611802f6c190eb"></a><!-- doxytag: member="bdm::ArxDS::model" ref="0aa9d8d35792159dc9611802f6c190eb" args="" -->
+<a class="el" href="classbdm_1_1mlnorm.html">mlnorm</a>&lt; <a class="el" href="classchmat.html">chmat</a> &gt;&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#0aa9d8d35792159dc9611802f6c190eb">model</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">model of Y - linear Gaussian <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="064e5d3f2dc0b39459c7ca53d05223e1"></a><!-- doxytag: member="bdm::ArxDS::opt_L_theta" ref="064e5d3f2dc0b39459c7ca53d05223e1" args="" -->
+bool&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#064e5d3f2dc0b39459c7ca53d05223e1">opt_L_theta</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">options <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="e13e5ffdfe9d896089310b0fc54e0c85"></a><!-- doxytag: member="bdm::ArxDS::L_theta" ref="e13e5ffdfe9d896089310b0fc54e0c85" args="" -->
+int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1ArxDS.html#e13e5ffdfe9d896089310b0fc54e0c85">L_theta</a></td></tr>
+
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">loggers <br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="81a70c39cbd429fcc8130a35b368346c"></a><!-- doxytag: member="bdm::ArxDS::L_R" ref="81a70c39cbd429fcc8130a35b368346c" args="" -->
+int&nbsp;</td><td class="memItemRight" valign="bottom"><b>L_R</b></td></tr>
+
 <tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="anchor" name="d8db125ac35f3b8eeb773fc9a4cb45ec"></a><!-- doxytag: member="bdm::ArxDS::Drv" ref="d8db125ac35f3b8eeb773fc9a4cb45ec" args="" -->
 <a class="el" href="classbdm_1_1RV.html">RV</a>&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classbdm_1_1DS.html#d8db125ac35f3b8eeb773fc9a4cb45ec">Drv</a></td></tr>
@@ -110,5 +161,5 @@
 <li><a class="el" href="libDS_8h-source.html">libDS.h</a><li>libDS.cpp</ul>
 </div>
-<hr size="1"><address style="text-align: right;"><small>Generated on Fri Feb 6 19:50:13 2009 for mixpp by&nbsp;
+<hr size="1"><address style="text-align: right;"><small>Generated on Wed Feb 11 10:21:02 2009 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.6 </small></address>
