Changeset 4

Timestamp:

01/17/08 18:00:28 (17 years ago)

Author:

smidl

Message:

doxy

Files:

• doc/html/annotated.html (modified) (1 diff)
• doc/html/classfnc-members.html (modified) (1 diff)
• doc/html/classfnc.html (modified) (2 diffs)
• doc/html/files.html (modified) (1 diff)
• doc/html/index.html (modified) (1 diff)
• doc/html/libBM_8h-source.html (modified) (1 diff)
• doc/html/libBM_8h.html (modified) (2 diffs)
• doc/html/libDC_8cpp.html (modified) (1 diff)
• doc/latex/annotated.tex (modified) (1 diff)
• doc/latex/doxygen.sty (modified) (1 diff)
• doc/latex/libBM_8h.tex (modified) (1 diff)
• doc/latex/refman.tex (modified) (2 diffs)
• libBM.h (modified) (4 diffs)
• mixpp.kdevelop.filelist (modified) (1 diff)
• mixpp.tag (added)

doc/html/annotated.html

@@ -16 +16 @@
   <ul>
     <li class="current"><a href="annotated.html"><span>Class&nbsp;List</span></a></li>
+    <li><a href="functions.html"><span>Class&nbsp;Members</span></a></li>
   </ul>
 </div>
 <h1>mixpp Class List</h1>Here are the classes, structs, unions and interfaces with brief descriptions:<table>
+  <tr><td class="indexkey"><a class="el" href="classBM.html">BM</a></td><td class="indexvalue">Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities </td></tr>
+  <tr><td class="indexkey"><a class="el" href="classepdf.html">epdf</a></td><td class="indexvalue">Probability density function with numerical statistics, e.g. posterior density </td></tr>
   <tr><td class="indexkey"><a class="el" href="classfnc.html">fnc</a></td><td class="indexvalue">Class representing function of variables </td></tr>
+  <tr><td class="indexkey"><a class="el" href="classmpdf.html">mpdf</a></td><td class="indexvalue">Conditional probability density, e.g. modeling some dependencies </td></tr>
+  <tr><td class="indexkey"><a class="el" href="classRV.html">RV</a></td><td class="indexvalue">Class representing variables, most often random variables </td></tr>
 </table>
-<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/classfnc-members.html

@@ -16 +16 @@
   <ul>
     <li><a href="annotated.html"><span>Class&nbsp;List</span></a></li>
+    <li><a href="functions.html"><span>Class&nbsp;Members</span></a></li>
   </ul>
 </div>
 <h1>fnc Member List</h1>This is the complete list of members for <a class="el" href="classfnc.html">fnc</a>, including all inherited members.<p><table>
-</table><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+</table><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/classfnc.html

@@ -16 +16 @@
   <ul>
     <li><a href="annotated.html"><span>Class&nbsp;List</span></a></li>
+    <li><a href="functions.html"><span>Class&nbsp;Members</span></a></li>
   </ul>
 </div>
@@ -31 +32 @@
 Class representing function of variables. <hr>The documentation for this class was generated from the following file:<ul>
 <li>work/mixpp/<a class="el" href="libBM_8h-source.html">libBM.h</a></ul>
-<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/files.html

@@ -17 +17 @@
   <tr><td class="indexkey">work/mixpp/<a class="el" href="libDC_8cpp.html">libDC.cpp</a></td><td class="indexvalue">Matrices in decomposed forms (LDL', LU, UDU', etc) </td></tr>
 </table>
-<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+<hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/index.html

@@ -15 +15 @@
 <h1>mixpp Documentation</h1>
 <p>
-<h3 align="center">1 </h3><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+<h3 align="center">1 </h3><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/libBM_8h-source.html

@@ -22 +22 @@
 <a name="l00019"></a>00019 <span class="keyword">using namespace </span>itpp;
 <a name="l00020"></a>00020 
-<a name="l00021"></a>00021 <span class="keyword">class </span>RV {
-<a name="l00022"></a>00022 <span class="keywordtype">int</span> len;
-<a name="l00023"></a>00023 ivec ids;
-<a name="l00024"></a>00024 ivec sizes;
-<a name="l00025"></a>00025 ivec times;
-<a name="l00026"></a>00026 ivec obs;
-<a name="l00027"></a>00027 Array&lt;std::string&gt; names;
-<a name="l00028"></a>00028 
-<a name="l00029"></a>00029 <span class="keyword">public</span>:
-<a name="l00031"></a>00031  RV(ivec in_ids, Array&lt;std::string&gt; in_names, ivec in_sizes, ivec in_times, ivec in_obs);
-<a name="l00033"></a>00033  RV(ivec ids);
-<a name="l00034"></a>00034  <span class="keyword">friend</span> std::ostream &amp;operator&lt;&lt;(std::ostream &amp;os, <span class="keyword">const</span> RV &amp;rv);
-<a name="l00035"></a>00035 };
-<a name="l00036"></a>00036 
+<a name="l00022"></a><a class="code" href="classRV.html">00022</a> <span class="keyword">class </span><a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> {
+<a name="l00023"></a>00023 <span class="keywordtype">int</span> len;
+<a name="l00024"></a>00024 ivec ids;
+<a name="l00025"></a>00025 ivec sizes;
+<a name="l00026"></a>00026 ivec times;
+<a name="l00027"></a>00027 ivec obs;
+<a name="l00028"></a>00028 Array&lt;std::string&gt; names;
+<a name="l00029"></a>00029 
+<a name="l00030"></a>00030 <span class="keyword">public</span>:
+<a name="l00032"></a>00032  <a class="code" href="classRV.html#e46882dec2c30b12be282d34b03417b2" title="Full constructor which is called by the others.">RV</a>(ivec in_ids, Array&lt;std::string&gt; in_names, ivec in_sizes, ivec in_times, ivec in_obs);
+<a name="l00034"></a>00034  <a class="code" href="classRV.html#e46882dec2c30b12be282d34b03417b2" title="Full constructor which is called by the others.">RV</a>(ivec ids);
+<a name="l00035"></a>00035  <span class="keyword">friend</span> std::ostream &amp;operator&lt;&lt;(std::ostream &amp;os, <span class="keyword">const</span> <a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> &amp;rv);
+<a name="l00036"></a>00036 };
 <a name="l00037"></a>00037 
 <a name="l00038"></a>00038 
 <a name="l00039"></a>00039 
-<a name="l00041"></a><a class="code" href="classfnc.html">00041</a> <span class="keyword">class </span><a class="code" href="classfnc.html" title="Class representing function of variables.">fnc</a> {
-<a name="l00042"></a>00042 RV rv;
-<a name="l00043"></a>00043 };
-<a name="l00044"></a>00044 
+<a name="l00040"></a>00040 
+<a name="l00042"></a><a class="code" href="classfnc.html">00042</a> <span class="keyword">class </span><a class="code" href="classfnc.html" title="Class representing function of variables.">fnc</a> {
+<a name="l00043"></a>00043 <a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> rv;
+<a name="l00044"></a>00044 };
 <a name="l00045"></a>00045 
-<a name="l00046"></a>00046 <span class="keyword">class </span>BM {
-<a name="l00047"></a>00047 <span class="keyword">public</span>:
-<a name="l00049"></a>00049 <span class="keywordtype">void</span> bayes(vec dt);
-<a name="l00051"></a>00051 <span class="keyword">virtual</span> <span class="keywordtype">void</span> bayes(mat Dt);
-<a name="l00052"></a>00052 };
-<a name="l00053"></a>00053 
-<a name="l00054"></a>00054 <span class="keyword">class </span>epdf {
-<a name="l00055"></a>00055 RV rv;
-<a name="l00056"></a>00056 <span class="keyword">public</span>:
-<a name="l00058"></a>00058 <span class="keyword">virtual</span> vec moment(<span class="keyword">const</span> <span class="keywordtype">int</span> order = 1);
-<a name="l00059"></a>00059 };
-<a name="l00060"></a>00060 
-<a name="l00061"></a>00061 <span class="keyword">class </span>mpdf {
-<a name="l00063"></a>00063 RV rv;
-<a name="l00065"></a>00065 RV rvc;
-<a name="l00066"></a>00066 <span class="keyword">public</span>:
-<a name="l00067"></a>00067 
-<a name="l00069"></a>00069 <span class="keyword">virtual</span> <a class="code" href="classfnc.html" title="Class representing function of variables.">fnc</a> moment(<span class="keyword">const</span> <span class="keywordtype">int</span> order = 1);
-<a name="l00070"></a>00070 };
-<a name="l00071"></a>00071 
-<a name="l00072"></a>00072 <span class="preprocessor">#endif // BM_H</span>
-</pre></div><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+<a name="l00047"></a><a class="code" href="classBM.html">00047</a> <span class="keyword">class </span><a class="code" href="classBM.html" title="Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities.">BM</a> {
+<a name="l00048"></a>00048 <span class="keyword">public</span>:
+<a name="l00050"></a>00050 <span class="keywordtype">void</span> <a class="code" href="classBM.html#c1b46da4abb4302ed57858558c90d641" title="Incremental Bayes rule.">bayes</a>(vec dt);
+<a name="l00052"></a>00052 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classBM.html#c1b46da4abb4302ed57858558c90d641" title="Incremental Bayes rule.">bayes</a>(mat Dt);
+<a name="l00053"></a>00053 };
+<a name="l00054"></a>00054 
+<a name="l00056"></a><a class="code" href="classepdf.html">00056</a> <span class="keyword">class </span><a class="code" href="classepdf.html" title="Probability density function with numerical statistics, e.g. posterior density.">epdf</a> {
+<a name="l00057"></a>00057 <a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> rv;
+<a name="l00058"></a>00058 <span class="keyword">public</span>:
+<a name="l00060"></a>00060 <span class="keyword">virtual</span> vec <a class="code" href="classepdf.html#545555f9d561555603911f7d3989611f" title="Returns the required moment of the epdf.">moment</a>(<span class="keyword">const</span> <span class="keywordtype">int</span> order = 1);
+<a name="l00061"></a>00061 };
+<a name="l00062"></a>00062 
+<a name="l00064"></a><a class="code" href="classmpdf.html">00064</a> <span class="keyword">class </span><a class="code" href="classmpdf.html" title="Conditional probability density, e.g. modeling some dependencies.">mpdf</a> {
+<a name="l00066"></a>00066 <a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> rv;
+<a name="l00068"></a>00068 <a class="code" href="classRV.html" title="Class representing variables, most often random variables.">RV</a> rvc;
+<a name="l00069"></a>00069 <span class="keyword">public</span>:
+<a name="l00070"></a>00070 
+<a name="l00072"></a>00072 <span class="keyword">virtual</span> <a class="code" href="classfnc.html" title="Class representing function of variables.">fnc</a> <a class="code" href="classmpdf.html#0863640c439869e8fbbbeb2bd8ea1fc0" title="Returns the required moment of the epdf.">moment</a>(<span class="keyword">const</span> <span class="keywordtype">int</span> order = 1);
+<a name="l00073"></a>00073 };
+<a name="l00074"></a>00074 
+<a name="l00075"></a>00075 <span class="preprocessor">#endif // BM_H</span>
+</pre></div><hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/libBM_8h.html

@@ -21 +21 @@
 <tr><td></td></tr>
 <tr><td colspan="2"><br><h2>Classes</h2></td></tr>
-<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><b>RV</b></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classRV.html">RV</a></td></tr>
 
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Class representing variables, most often random variables.  <a href="classRV.html#_details">More...</a><br></td></tr>
 <tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classfnc.html">fnc</a></td></tr>
 
 <tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Class representing function of variables.  <a href="classfnc.html#_details">More...</a><br></td></tr>
-<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><b>BM</b></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classBM.html">BM</a></td></tr>
 
-<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><b>epdf</b></td></tr>
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities.  <a href="classBM.html#_details">More...</a><br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classepdf.html">epdf</a></td></tr>
 
-<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><b>mpdf</b></td></tr>
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Probability density function with numerical statistics, e.g. posterior density.  <a href="classepdf.html#_details">More...</a><br></td></tr>
+<tr><td class="memItemLeft" nowrap align="right" valign="top">class &nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classmpdf.html">mpdf</a></td></tr>
 
+<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Conditional probability density, e.g. modeling some dependencies.  <a href="classmpdf.html#_details">More...</a><br></td></tr>
 </table>
 <hr><a name="_details"></a><h2>Detailed Description</h2>
@@ -38 +42 @@
 <dl class="author" compact><dt><b>Author:</b></dt><dd>Vaclav Smidl.</dd></dl>
 ----------------------------------- BDM++ - C++ library for Bayesian Decision Making under Uncertainty<p>
-Using IT++ for numerical operations ----------------------------------- <hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+Using IT++ for numerical operations ----------------------------------- <hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/html/libDC_8cpp.html

@@ -27 +27 @@
 <dl class="author" compact><dt><b>Author:</b></dt><dd>Vaclav Smidl.</dd></dl>
 ----------------------------------- BDM++ - C++ library for Bayesian Decision Making under Uncertainty<p>
-Using IT++ for numerical operations ----------------------------------- <hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 17:26:44 2008 for mixpp by&nbsp;
+Using IT++ for numerical operations ----------------------------------- <hr size="1"><address style="text-align: right;"><small>Generated on Thu Jan 17 18:00:29 2008 for mixpp by&nbsp;
 <a href="http://www.doxygen.org/index.html">
 <img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.3 </small></address>

doc/latex/annotated.tex

@@ -1 +1 @@
 \section{mixpp Class List}
 Here are the classes, structs, unions and interfaces with brief descriptions:\begin{CompactList}
+\item\contentsline{section}{{\bf BM} (Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities )}{\pageref{classBM}}{}
+\item\contentsline{section}{{\bf epdf} (Probability density function with numerical statistics, e.g. posterior density )}{\pageref{classepdf}}{}
 \item\contentsline{section}{{\bf fnc} (Class representing function of variables )}{\pageref{classfnc}}{}
+\item\contentsline{section}{{\bf mpdf} (Conditional probability density, e.g. modeling some dependencies )}{\pageref{classmpdf}}{}
+\item\contentsline{section}{{\bf RV} (Class representing variables, most often random variables )}{\pageref{classRV}}{}
 \end{CompactList}

doc/latex/doxygen.sty

@@ -11 +11 @@
 \rhead[\fancyplain{}{\bfseries\leftmark}]
         {\fancyplain{}{\bfseries\thepage}}
-\rfoot[\fancyplain{}{\bfseries\scriptsize Generated on Thu Jan 17 17:26:44 2008 for mixpp by Doxygen }]{}
-\lfoot[]{\fancyplain{}{\bfseries\scriptsize Generated on Thu Jan 17 17:26:44 2008 for mixpp by Doxygen }}
+\rfoot[\fancyplain{}{\bfseries\scriptsize Generated on Thu Jan 17 18:00:29 2008 for mixpp by Doxygen }]{}
+\lfoot[]{\fancyplain{}{\bfseries\scriptsize Generated on Thu Jan 17 18:00:29 2008 for mixpp by Doxygen }}
 \cfoot{}
 \newenvironment{Code}

doc/latex/libBM_8h.tex

@@ -7 +7 @@
 \begin{CompactItemize}
 \item 
-class \textbf{RV}
-\item 
+class {\bf RV}
+\begin{CompactList}\small\item\em Class representing variables, most often random variables. \item\end{CompactList}\item 
 class {\bf fnc}
 \begin{CompactList}\small\item\em Class representing function of variables. \item\end{CompactList}\item 
-class \textbf{BM}
-\item 
-class \textbf{epdf}
-\item 
-class \textbf{mpdf}
-\end{CompactItemize}
+class {\bf BM}
+\begin{CompactList}\small\item\em Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities. \item\end{CompactList}\item 
+class {\bf epdf}
+\begin{CompactList}\small\item\em Probability density function with numerical statistics, e.g. posterior density. \item\end{CompactList}\item 
+class {\bf mpdf}
+\begin{CompactList}\small\item\em Conditional probability density, e.g. modeling some dependencies. \item\end{CompactList}\end{CompactItemize}
 
 

doc/latex/refman.tex

@@ -21 +21 @@
 {\large Generated by Doxygen 1.5.3}\\
 \vspace*{0.5cm}
-{\small Thu Jan 17 17:26:44 2008}\\
+{\small Thu Jan 17 18:00:29 2008}\\
 \end{center}
 \end{titlepage}
@@ -34 +34 @@
 \input{files}
 \chapter{mixpp Class Documentation}
-\input{classfnc}
+\input{classBM}
+\include{classepdf}
+\include{classfnc}
+\include{classmpdf}
+\include{classRV}
 \chapter{mixpp File Documentation}
 \input{libBM_8h}

libBM.h

@@ -19 +19 @@
 using namespace itpp;
 
+//! Class representing variables, most often random variables
 class RV {
 int len;
@@ -43 +44 @@
 };
 
-
+//! Bayesian Model of the world, i.e. all uncertainty is modeled by probabilities.
 class BM {
 public:
@@ -52 +53 @@
 };
 
+//! Probability density function with numerical statistics, e.g. posterior density.
 class epdf {
 RV rv;
@@ -59 +61 @@
 };
 
+//! Conditional probability density, e.g. modeling some dependencies. 
 class mpdf {
 //! modeled random variable

mixpp.kdevelop.filelist

@@ -1 +1 @@
 # KDevelop Custom Project File List
 Makefile
-arx.cpp
+doc
+doc/latex
+doc/latex/Makefile
 libBM.cpp
 libBM.h