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  • library/doc/html/datasources_8h_source.html

    r591 r608  
    7676<a name="l00021"></a>00021 <span class="keyword">namespace </span>bdm { 
    7777<a name="l00029"></a><a class="code" href="classbdm_1_1MemDS.html">00029</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1MemDS.html" title="Memory storage of off-line data column-wise.">MemDS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
    78 <a name="l00030"></a>00030 <span class="keyword">protected</span>: 
    79 <a name="l00032"></a><a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260">00032</a>         mat <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>; 
    80 <a name="l00034"></a><a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107">00034</a>         <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a>; 
    81 <a name="l00036"></a><a class="code" href="classbdm_1_1MemDS.html#a865814d49913dcf672bb20a4334d3dc4">00036</a>         ivec <a class="code" href="classbdm_1_1MemDS.html#a865814d49913dcf672bb20a4334d3dc4" title="vector of rows that are presented in Dt">rowid</a>; 
    82 <a name="l00038"></a><a class="code" href="classbdm_1_1MemDS.html#a166522aed4d3b12d9b3c2afaf6673301">00038</a>         ivec <a class="code" href="classbdm_1_1MemDS.html#a166522aed4d3b12d9b3c2afaf6673301" title="vector of delays that are presented in Dt">delays</a>; 
     78<a name="l00030"></a>00030         <span class="keyword">protected</span>: 
     79<a name="l00032"></a><a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260">00032</a>                 mat <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>; 
     80<a name="l00034"></a><a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107">00034</a>                 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a>; 
     81<a name="l00036"></a><a class="code" href="classbdm_1_1MemDS.html#a865814d49913dcf672bb20a4334d3dc4">00036</a>                 ivec <a class="code" href="classbdm_1_1MemDS.html#a865814d49913dcf672bb20a4334d3dc4" title="vector of rows that are presented in Dt">rowid</a>; 
     82<a name="l00038"></a><a class="code" href="classbdm_1_1MemDS.html#a166522aed4d3b12d9b3c2afaf6673301">00038</a>                 ivec <a class="code" href="classbdm_1_1MemDS.html#a166522aed4d3b12d9b3c2afaf6673301" title="vector of delays that are presented in Dt">delays</a>; 
    8383<a name="l00039"></a>00039  
    84 <a name="l00040"></a>00040 <span class="keyword">public</span>: 
    85 <a name="l00041"></a>00041         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a23522b9e7dd0bb0c365cc9cde4c05449" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ); 
    86 <a name="l00042"></a>00042         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a23522b9e7dd0bb0c365cc9cde4c05449" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indeces ); 
    87 <a name="l00043"></a>00043         <span class="keywordtype">void</span> set_rvs ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;drv, <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;urv ); 
     84<a name="l00040"></a>00040         <span class="keyword">public</span>: 
     85<a name="l00041"></a>00041                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a23522b9e7dd0bb0c365cc9cde4c05449" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ); 
     86<a name="l00042"></a>00042                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a23522b9e7dd0bb0c365cc9cde4c05449" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indeces ); 
     87<a name="l00043"></a>00043                 <span class="keywordtype">void</span> set_rvs ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;drv, <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;urv ); 
    8888<a name="l00044"></a>00044  
    89 <a name="l00045"></a><a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5">00045</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut ) { 
    90 <a name="l00046"></a>00046                 <a class="code" href="bdmerror_8h.html#a7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">&quot;MemDS::write is not supported&quot;</span> ); 
    91 <a name="l00047"></a>00047         } 
     89<a name="l00045"></a><a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5">00045</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut ) { 
     90<a name="l00046"></a>00046                         <a class="code" href="bdmerror_8h.html#a7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">&quot;MemDS::write is not supported&quot;</span> ); 
     91<a name="l00047"></a>00047                 } 
    9292<a name="l00048"></a>00048  
    93 <a name="l00049"></a>00049         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut, ivec &amp;indices ) { 
    94 <a name="l00050"></a>00050                 <a class="code" href="bdmerror_8h.html#a7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">&quot;MemDS::write is not supported&quot;</span> ); 
    95 <a name="l00051"></a>00051         } 
     93<a name="l00049"></a>00049                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a9a7f17598fe2b458707ba932865beef5" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut, ivec &amp;indices ) { 
     94<a name="l00050"></a>00050                         <a class="code" href="bdmerror_8h.html#a7c43f3a72afe68ab0c85663a1bb3521a" title="Unconditionally throw std::runtime_error.">bdm_error</a> ( <span class="stringliteral">&quot;MemDS::write is not supported&quot;</span> ); 
     95<a name="l00051"></a>00051                 } 
    9696<a name="l00052"></a>00052  
    97 <a name="l00053"></a>00053         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a21916feb3e5ff960855c09b06a0d279b" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>(); 
    98 <a name="l00055"></a><a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3">00055</a>         <a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3" title="Default constructor.">MemDS</a> () {}; 
    99 <a name="l00056"></a>00056         <a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3" title="Default constructor.">MemDS</a> ( mat &amp;Dat, ivec &amp;rowid0, ivec &amp;delays0 ); 
     97<a name="l00053"></a>00053                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MemDS.html#a21916feb3e5ff960855c09b06a0d279b" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>(); 
     98<a name="l00055"></a><a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3">00055</a>                 <a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3" title="Default constructor.">MemDS</a> () {}; 
     99<a name="l00056"></a>00056                 <a class="code" href="classbdm_1_1MemDS.html#a1ea231f4066652996cde4826560d93e3" title="Default constructor.">MemDS</a> ( mat &amp;Dat, ivec &amp;rowid0, ivec &amp;delays0 ); 
    100100<a name="l00057"></a>00057 }; 
    101101<a name="l00058"></a>00058  
    102 <a name="l00062"></a><a class="code" href="classbdm_1_1FileDS.html">00062</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1FileDS.html">FileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1MemDS.html" title="Memory storage of off-line data column-wise.">MemDS</a> { 
    103 <a name="l00063"></a>00063  
    104 <a name="l00064"></a>00064 <span class="keyword">public</span>: 
    105 <a name="l00065"></a><a class="code" href="classbdm_1_1FileDS.html#a0bf36650e9d1af2d0743ffe8a3fcff14">00065</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a0bf36650e9d1af2d0743ffe8a3fcff14" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ) { 
    106 <a name="l00066"></a>00066                 dt = <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.get_col ( <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> ); 
    107 <a name="l00067"></a>00067         } 
    108 <a name="l00068"></a>00068  
    109 <a name="l00069"></a><a class="code" href="classbdm_1_1FileDS.html#a3c546e8d9eb71e079e046e3d2f69c6c4">00069</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a3c546e8d9eb71e079e046e3d2f69c6c4" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indices ) { 
    110 <a name="l00070"></a>00070                 vec tmp = <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.get_col ( <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> ); 
    111 <a name="l00071"></a>00071                 dt = tmp ( indices ); 
    112 <a name="l00072"></a>00072         } 
    113 <a name="l00073"></a>00073  
    114 <a name="l00075"></a><a class="code" href="classbdm_1_1FileDS.html#aa6af63065097147b390e684a7842a26a">00075</a>         <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1FileDS.html#aa6af63065097147b390e684a7842a26a" title="returns number of data in the file;">ndat</a>() { 
    115 <a name="l00076"></a>00076                 <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.cols(); 
    116 <a name="l00077"></a>00077         } 
    117 <a name="l00079"></a><a class="code" href="classbdm_1_1FileDS.html#a998f590eeddee97ae6918671e40756b8">00079</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a998f590eeddee97ae6918671e40756b8" title="no sense to log this type">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) {}; 
    118 <a name="l00081"></a><a class="code" href="classbdm_1_1FileDS.html#a59d44ef34a523127dd79c076461c43b6">00081</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a59d44ef34a523127dd79c076461c43b6" title="no sense to log this type">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) {}; 
    119 <a name="l00082"></a>00082 }; 
    120 <a name="l00083"></a>00083  
    121 <a name="l00090"></a><a class="code" href="classbdm_1_1ITppFileDS.html">00090</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1FileDS.html">FileDS</a> { 
    122 <a name="l00091"></a>00091  
    123 <a name="l00092"></a>00092 <span class="keyword">public</span>: 
    124 <a name="l00093"></a>00093         <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;fname, <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;varname ) : <a class="code" href="classbdm_1_1FileDS.html">FileDS</a>() { 
    125 <a name="l00094"></a>00094                 it_file it ( fname ); 
    126 <a name="l00095"></a>00095                 it &lt;&lt; Name ( varname ); 
    127 <a name="l00096"></a>00096                 it &gt;&gt; <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>; 
    128 <a name="l00097"></a>00097                 <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> = 0; 
    129 <a name="l00098"></a>00098                 <span class="comment">//rowid and delays are ignored</span> 
    130 <a name="l00099"></a>00099         }; 
    131 <a name="l00100"></a>00100  
    132 <a name="l00101"></a>00101         <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> () : <a class="code" href="classbdm_1_1FileDS.html">FileDS</a>() { 
    133 <a name="l00102"></a>00102         }; 
    134 <a name="l00103"></a>00103  
    135 <a name="l00104"></a>00104         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ITppFileDS.html#afd192da176625a909fa853458b604566" title="This method arrange instance properties according the data stored in the Setting...">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
    136 <a name="l00105"></a>00105  
    137 <a name="l00106"></a>00106         <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
    138 <a name="l00107"></a>00107  
    139 <a name="l00108"></a>00108 }; 
    140 <a name="l00109"></a>00109  
    141 <a name="l00110"></a>00110 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ); 
    142 <a name="l00111"></a>00111 SHAREDPTR ( <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ); 
    143 <a name="l00112"></a>00112  
    144 <a name="l00120"></a><a class="code" href="classbdm_1_1CsvFileDS.html">00120</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1CsvFileDS.html" title="CSV file data storage The constructor creates Data matrix from the records in a CSV...">CsvFileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1FileDS.html">FileDS</a> { 
    145 <a name="l00121"></a>00121  
    146 <a name="l00122"></a>00122 <span class="keyword">public</span>: 
    147 <a name="l00124"></a>00124         <a class="code" href="classbdm_1_1CsvFileDS.html#a8d9d56cdf6b8d0236e32a80e11c238b0" title="Constructor - create DS from a CSV file.">CsvFileDS</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span>&amp; fname, <span class="keyword">const</span> <span class="keywordtype">string</span>&amp; orientation = <span class="stringliteral">&quot;BY_COL&quot;</span> ); 
    148 <a name="l00125"></a>00125 }; 
    149 <a name="l00126"></a>00126  
    150 <a name="l00127"></a>00127  
    151 <a name="l00128"></a>00128  
    152 <a name="l00133"></a><a class="code" href="classbdm_1_1ArxDS.html">00133</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1ArxDS.html" title="Generator of ARX data.">ArxDS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
    153 <a name="l00134"></a>00134 <span class="keyword">protected</span>: 
    154 <a name="l00136"></a><a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb">00136</a>         <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb" title="Rv of the regressor.">Rrv</a>; 
    155 <a name="l00138"></a><a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597">00138</a>         vec <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>; 
    156 <a name="l00140"></a><a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5">00140</a>         vec <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>; 
    157 <a name="l00142"></a><a class="code" href="classbdm_1_1ArxDS.html#ab2d7530264499b92c3aa32454b960abe">00142</a>         vec <a class="code" href="classbdm_1_1ArxDS.html#ab2d7530264499b92c3aa32454b960abe" title="temporary variable for regressor">rgr</a>; 
    158 <a name="l00144"></a><a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898">00144</a>         <a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> <a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898" title="data link: H -&amp;gt; rgr">rgrlnk</a>; 
    159 <a name="l00146"></a><a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb">00146</a>         <a class="code" href="classbdm_1_1mlnorm.html">mlnorm&lt;chmat&gt;</a> <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>; 
    160 <a name="l00148"></a><a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1">00148</a>         <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a>; 
    161 <a name="l00150"></a><a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85">00150</a>         <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a>; 
    162 <a name="l00151"></a>00151         <span class="keywordtype">int</span> L_R; 
    163 <a name="l00152"></a>00152         <span class="keywordtype">int</span> dt_size; 
    164 <a name="l00153"></a>00153 <span class="keyword">public</span>: 
    165 <a name="l00154"></a><a class="code" href="classbdm_1_1ArxDS.html#adb242e35812c311c8415bb7e31c3f595">00154</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#adb242e35812c311c8415bb7e31c3f595" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ) { 
    166 <a name="l00155"></a>00155                 dt = <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>; 
    167 <a name="l00156"></a>00156         } 
    168 <a name="l00157"></a>00157  
    169 <a name="l00158"></a><a class="code" href="classbdm_1_1ArxDS.html#a701151418bc5fc3861acef8359fb0d80">00158</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a701151418bc5fc3861acef8359fb0d80" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indices ) { 
    170 <a name="l00159"></a>00159                 dt = <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a> ( indices ); 
    171 <a name="l00160"></a>00160         } 
    172 <a name="l00161"></a>00161  
    173 <a name="l00162"></a><a class="code" href="classbdm_1_1ArxDS.html#a8f6da8a00abba70bc58c7a4030bd8940">00162</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a8f6da8a00abba70bc58c7a4030bd8940" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut ) { 
    174 <a name="l00163"></a>00163                 <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a> = ut; 
    175 <a name="l00164"></a>00164         } 
     102<a name="l00063"></a><a class="code" href="classbdm_1_1EpdfDS.html">00063</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1EpdfDS.html" title="Simulate data from a static pdf Trivial example of a data source, could be used for...">EpdfDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
     103<a name="l00064"></a>00064         <span class="keyword">protected</span>: 
     104<a name="l00066"></a><a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5">00066</a>                 <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;epdf&gt;</a> <a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5" title="internal pointer to epdf from which we samplecond">iepdf</a>; 
     105<a name="l00068"></a><a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f">00068</a>                 vec <a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f" title="internal storage of data sample">dt</a>; 
     106<a name="l00069"></a>00069         <span class="keyword">public</span>: 
     107<a name="l00070"></a><a class="code" href="classbdm_1_1EpdfDS.html#aa1bd25d052dd50da9854d78e2f2096d0">00070</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1EpdfDS.html#aa1bd25d052dd50da9854d78e2f2096d0" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>() { 
     108<a name="l00071"></a>00071                         <a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f" title="internal storage of data sample">dt</a>=<a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5" title="internal pointer to epdf from which we samplecond">iepdf</a>-&gt;sample(); 
     109<a name="l00072"></a>00072                 } 
     110<a name="l00073"></a><a class="code" href="classbdm_1_1EpdfDS.html#a62c4a9d343dd773c4e75b5f2338b9ba7">00073</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1EpdfDS.html#a62c4a9d343dd773c4e75b5f2338b9ba7" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt_out ) { 
     111<a name="l00074"></a>00074                         dt_out = <a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f" title="internal storage of data sample">dt</a>; 
     112<a name="l00075"></a>00075                 } 
     113<a name="l00076"></a><a class="code" href="classbdm_1_1EpdfDS.html#a5b3d9370351ca393d4df6f6da6ac5f99">00076</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1EpdfDS.html#a5b3d9370351ca393d4df6f6da6ac5f99" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt_out, <span class="keyword">const</span> ivec &amp;ids ) { 
     114<a name="l00077"></a>00077                         dt_out = <a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f" title="internal storage of data sample">dt</a> ( ids ); 
     115<a name="l00078"></a>00078                 } 
     116<a name="l00079"></a>00079                 <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a>&amp; _drv() { 
     117<a name="l00080"></a>00080                         <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5" title="internal pointer to epdf from which we samplecond">iepdf</a>-&gt;_rv(); 
     118<a name="l00081"></a>00081                 } 
     119<a name="l00082"></a>00082  
     120<a name="l00090"></a><a class="code" href="classbdm_1_1EpdfDS.html#a3fdfb570b5d12332b2ba5662d17badac">00090</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1EpdfDS.html#a3fdfb570b5d12332b2ba5662d17badac">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ) { 
     121<a name="l00091"></a>00091                         <a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5" title="internal pointer to epdf from which we samplecond">iepdf</a>=UI::build&lt;epdf&gt; ( <span class="keyword">set</span>,<span class="stringliteral">&quot;epdf&quot;</span>,UI::compulsory ); 
     122<a name="l00092"></a>00092                         <a class="code" href="classbdm_1_1EpdfDS.html#a67637d64bcabf6ecb4a80284dc60dc3f" title="internal storage of data sample">dt</a> = zeros ( <a class="code" href="classbdm_1_1EpdfDS.html#a83784c6ca9d311a38ff768cb0718c5b5" title="internal pointer to epdf from which we samplecond">iepdf</a>-&gt;dimension() ); 
     123<a name="l00093"></a>00093                 } 
     124<a name="l00094"></a>00094 }; 
     125<a name="l00095"></a>00095 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( EpdfDS ); 
     126<a name="l00096"></a>00096  
     127<a name="l00100"></a><a class="code" href="classbdm_1_1MpdfDS.html">00100</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1MpdfDS.html" title="Simulate data from conditional density Still having only one density but allowing...">MpdfDS</a> :<span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
     128<a name="l00101"></a>00101         <span class="keyword">protected</span>: 
     129<a name="l00103"></a><a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac">00103</a>                 <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> <a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>; 
     130<a name="l00105"></a><a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082">00105</a>                 vec <a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>; 
     131<a name="l00107"></a><a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417">00107</a>                 vec <a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a>; 
     132<a name="l00109"></a><a class="code" href="classbdm_1_1MpdfDS.html#a54e70167144e692877e7b49633219d5a">00109</a>                 <a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a> <a class="code" href="classbdm_1_1MpdfDS.html#a54e70167144e692877e7b49633219d5a" title="datalink between ut and regressor">ut2rgr</a>; 
     133<a name="l00111"></a><a class="code" href="classbdm_1_1MpdfDS.html#a6ccbcf01b1cd5bd3500aefc3091d9a2b">00111</a>                 <a class="code" href="classbdm_1_1datalink__buffered.html" title="Datalink that buffers delayed values - do not forget to call step().">datalink_buffered</a> <a class="code" href="classbdm_1_1MpdfDS.html#a6ccbcf01b1cd5bd3500aefc3091d9a2b" title="datalink between yt and regressor">yt2rgr</a>; 
     134<a name="l00113"></a><a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e">00113</a>                 vec <a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e" title="numeric values of regressor">rgr</a>; 
     135<a name="l00114"></a>00114                  
     136<a name="l00115"></a>00115         <span class="keyword">public</span>: 
     137<a name="l00116"></a><a class="code" href="classbdm_1_1MpdfDS.html#a9dfd98688d14f647c613bf63a95a19b6">00116</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MpdfDS.html#a9dfd98688d14f647c613bf63a95a19b6" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>() { 
     138<a name="l00117"></a>00117                         <a class="code" href="classbdm_1_1MpdfDS.html#a6ccbcf01b1cd5bd3500aefc3091d9a2b" title="datalink between yt and regressor">yt2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#af137706c55891ba8a8aecc52ea96865f" title="push current data to history">step</a>(<a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>); <span class="comment">// y is now history</span> 
     139<a name="l00118"></a>00118                         <a class="code" href="classbdm_1_1MpdfDS.html#a54e70167144e692877e7b49633219d5a" title="datalink between ut and regressor">ut2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#a681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &amp;quot;Up&amp;quot;.">filldown</a> ( <a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a>,<a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e" title="numeric values of regressor">rgr</a> ); 
     140<a name="l00119"></a>00119                         <a class="code" href="classbdm_1_1MpdfDS.html#a6ccbcf01b1cd5bd3500aefc3091d9a2b" title="datalink between yt and regressor">yt2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#a681745a319728a416486df38aacd579f" title="Get val for vector val_down from val of &amp;quot;Up&amp;quot;.">filldown</a> ( <a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>,<a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e" title="numeric values of regressor">rgr</a> ); 
     141<a name="l00120"></a>00120                         <a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>=<a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;samplecond ( <a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e" title="numeric values of regressor">rgr</a> ); 
     142<a name="l00121"></a>00121                         <a class="code" href="classbdm_1_1MpdfDS.html#a54e70167144e692877e7b49633219d5a" title="datalink between ut and regressor">ut2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#af137706c55891ba8a8aecc52ea96865f" title="push current data to history">step</a>(<a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a>); <span class="comment">//u is now history</span> 
     143<a name="l00122"></a>00122                 } 
     144<a name="l00123"></a><a class="code" href="classbdm_1_1MpdfDS.html#a8752dbb56c269353cd5135349b4f8408">00123</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MpdfDS.html#a8752dbb56c269353cd5135349b4f8408" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt_out ) { 
     145<a name="l00124"></a>00124                         <a class="code" href="bdmerror_8h.html#a89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a>(dt_out.length()&gt;=<a class="code" href="classbdm_1_1DS.html#ad7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a>+<a class="code" href="classbdm_1_1DS.html#a22a4b29aa6e9f3bf17bcc4b28567e8bd" title="size of output">ytsize</a>,<span class="stringliteral">&quot;Short output vector&quot;</span>); 
     146<a name="l00125"></a>00125                         dt_out.set_subvector(0, <a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>); 
     147<a name="l00126"></a>00126                         dt_out.set_subvector(ytsize, <a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a>); 
     148<a name="l00127"></a>00127                 } 
     149<a name="l00128"></a>00128                 <span class="keywordtype">void</span> write(<span class="keyword">const</span> vec &amp;ut0){<a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a>=ut0;} 
     150<a name="l00129"></a>00129  
     151<a name="l00137"></a><a class="code" href="classbdm_1_1MpdfDS.html#a39ef55fb36da354c93c544129e03f558">00137</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1MpdfDS.html#a39ef55fb36da354c93c544129e03f558">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ) { 
     152<a name="l00138"></a>00138                         <a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>=UI::build&lt;mpdf&gt; ( <span class="keyword">set</span>,<span class="stringliteral">&quot;mpdf&quot;</span>,UI::compulsory ); 
     153<a name="l00139"></a>00139                          
     154<a name="l00140"></a>00140                         <a class="code" href="classbdm_1_1DS.html#aeb9de2a85f0d8257d79d9b68c05c4995" title="Description of output data.">Yrv</a> = <a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;_rv(); 
     155<a name="l00141"></a>00141                         <span class="comment">// get unique rvs form rvc</span> 
     156<a name="l00142"></a>00142                         <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> rgrv0=<a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;_rvc().remove_time(); 
     157<a name="l00143"></a>00143                         <span class="comment">// input is what in not in Yrv</span> 
     158<a name="l00144"></a>00144                         <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>=rgrv0.<a class="code" href="classbdm_1_1RV.html#aaec44dabdf0a6d90fbae95e1356eda39" title="Subtract another variable from the current one.">subt</a>(Yrv);  
     159<a name="l00145"></a>00145                         <a class="code" href="classbdm_1_1DS.html#a3a92d77fd97fdb6bf1c8edb1e38c6bbc" title="set random variables">set_drv</a>(Yrv, <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>); 
     160<a name="l00146"></a>00146                         <span class="comment">// connect input and output to rvc</span> 
     161<a name="l00147"></a>00147                         <a class="code" href="classbdm_1_1MpdfDS.html#a54e70167144e692877e7b49633219d5a" title="datalink between ut and regressor">ut2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#aadefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">set_connection</a>(<a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;_rvc(), <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>);  
     162<a name="l00148"></a>00148                         <a class="code" href="classbdm_1_1MpdfDS.html#a6ccbcf01b1cd5bd3500aefc3091d9a2b" title="datalink between yt and regressor">yt2rgr</a>.<a class="code" href="classbdm_1_1datalink__buffered.html#aadefa427312905425ebab8531da1846a" title="set connection, rv must be fully present in rv_up">set_connection</a>(<a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;_rvc(), Yrv);  
     163<a name="l00149"></a>00149  
     164<a name="l00150"></a>00150                         <a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a> = zeros ( <a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;dimension() ); 
     165<a name="l00151"></a>00151                         <a class="code" href="classbdm_1_1MpdfDS.html#a1fffeda455aa454c4509ff69fa9ccb3e" title="numeric values of regressor">rgr</a> = zeros ( <a class="code" href="classbdm_1_1MpdfDS.html#a7b91950fa4c2c323df69a6bc9a6a04ac" title="internal pointer to epdf from which we samplecond">impdf</a>-&gt;dimensionc() ); 
     166<a name="l00152"></a>00152                         <a class="code" href="classbdm_1_1MpdfDS.html#a27751c04183acab85bdaf3598f47a417" title="input vector">ut</a> = zeros(<a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>()); 
     167<a name="l00153"></a>00153  
     168<a name="l00154"></a>00154                         <a class="code" href="classbdm_1_1DS.html#a22a4b29aa6e9f3bf17bcc4b28567e8bd" title="size of output">ytsize</a>=<a class="code" href="classbdm_1_1MpdfDS.html#a959cfe345bf0f165ff80f687826e1082" title="internal storage of data sample">yt</a>.length(); 
     169<a name="l00155"></a>00155                         <a class="code" href="classbdm_1_1DS.html#ad7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a>=ut.length(); 
     170<a name="l00156"></a>00156                         <a class="code" href="classbdm_1_1DS.html#af96cae44624e79638a91ec4f2c7c81a9" title="size of data returned by getdata() ">dtsize</a> = ytsize+<a class="code" href="classbdm_1_1DS.html#ad7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a>; 
     171<a name="l00157"></a>00157                 } 
     172<a name="l00158"></a>00158 }; 
     173<a name="l00159"></a>00159 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( MpdfDS ); 
     174<a name="l00160"></a>00160  
     175<a name="l00164"></a><a class="code" href="classbdm_1_1FileDS.html">00164</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1FileDS.html">FileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1MemDS.html" title="Memory storage of off-line data column-wise.">MemDS</a> { 
    176176<a name="l00165"></a>00165  
    177 <a name="l00166"></a><a class="code" href="classbdm_1_1ArxDS.html#a477fd706639535f520e9dbbd19f73318">00166</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a477fd706639535f520e9dbbd19f73318" title="Accepts action variables at specific indeces.">write</a> ( vec &amp;ut, <span class="keyword">const</span> ivec &amp;indices ) { 
    178 <a name="l00167"></a>00167                 <a class="code" href="bdmerror_8h.html#a89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( ut.length() == indices.length(), <span class="stringliteral">&quot;ArxDS&quot;</span> ); 
    179 <a name="l00168"></a>00168                 set_subvector ( <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>, indices, ut ); 
    180 <a name="l00169"></a>00169         } 
     177<a name="l00166"></a>00166         <span class="keyword">public</span>: 
     178<a name="l00167"></a><a class="code" href="classbdm_1_1FileDS.html#a0bf36650e9d1af2d0743ffe8a3fcff14">00167</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a0bf36650e9d1af2d0743ffe8a3fcff14" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ) { 
     179<a name="l00168"></a>00168                         dt = <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.get_col ( <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> ); 
     180<a name="l00169"></a>00169                 } 
    181181<a name="l00170"></a>00170  
    182 <a name="l00171"></a>00171         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a57dfa26b23cc03d53b123fa7e0474b19" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>(); 
    183 <a name="l00172"></a>00172  
    184 <a name="l00174"></a><a class="code" href="classbdm_1_1ArxDS.html#a7c8b418677a48041adacac8e8e9c9849">00174</a>         <a class="code" href="classbdm_1_1ArxDS.html#a7c8b418677a48041adacac8e8e9c9849" title="Default constructor.">ArxDS</a> ( ) {}; 
    185 <a name="l00176"></a><a class="code" href="classbdm_1_1ArxDS.html#a2d9abc62f1fee862f0e1c60c5c4a3c8a">00176</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a2d9abc62f1fee862f0e1c60c5c4a3c8a" title="Set parameters of the internal model, H is maximum time delay.">set_parameters</a> ( <span class="keyword">const</span> mat &amp;Th0, <span class="keyword">const</span> vec mu0, <span class="keyword">const</span> <a class="code" href="classbdm_1_1chmat.html" title="Symmetric matrix stored in square root decomposition using upper cholesky.">chmat</a> &amp;sqR0 ) { 
    186 <a name="l00177"></a>00177                 <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a04f7c6cda7b2f95161dd5fbcf15d1fd5" title="Set A and R.">set_parameters</a> ( Th0, mu0, sqR0 ); 
    187 <a name="l00178"></a>00178         }; 
    188 <a name="l00180"></a><a class="code" href="classbdm_1_1ArxDS.html#ad57285965debab8a4bfc340d4477c853">00180</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#ad57285965debab8a4bfc340d4477c853" title="Set.">set_drv</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;yrv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;urv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;rrv ) { 
    189 <a name="l00181"></a>00181                 <a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb" title="Rv of the regressor.">Rrv</a> = rrv; 
    190 <a name="l00182"></a>00182                 <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a> = urv; 
    191 <a name="l00183"></a>00183                 dt_size = yrv._dsize() + urv._dsize(); 
    192 <a name="l00184"></a>00184  
    193 <a name="l00185"></a>00185                 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> drv = concat ( yrv, urv ); 
    194 <a name="l00186"></a>00186                 <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> = drv; 
    195 <a name="l00187"></a>00187                 <span class="keywordtype">int</span> td = rrv.<a class="code" href="classbdm_1_1RV.html#a9a5c5aeeaf39299d07763377b05a8241" title="Minimum time-offset.">mint</a>(); 
    196 <a name="l00188"></a>00188                 <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>.set_size ( drv._dsize() * ( -td + 1 ) ); 
    197 <a name="l00189"></a>00189                 <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>.set_size ( <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>._dsize() ); 
    198 <a name="l00190"></a>00190                 <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = -1; i &gt;= td; i-- ) { 
    199 <a name="l00191"></a>00191                         drv.<a class="code" href="classbdm_1_1RV.html#abd77cb0899f7fba1d0e34396137b7f1f" title="Shift time by delta.">t</a> ( -1 ); 
    200 <a name="l00192"></a>00192                         <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#a87841b5ee43997b79789c0c22047e224" title="Add (concat) another variable to the current one,.">add</a> ( drv ); <span class="comment">//shift u1</span> 
    201 <a name="l00193"></a>00193                 } 
    202 <a name="l00194"></a>00194                 <a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898" title="data link: H -&amp;gt; rgr">rgrlnk</a>.<a class="code" href="classbdm_1_1datalink.html#afb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rrv, <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> ); 
    203 <a name="l00195"></a>00195  
    204 <a name="l00196"></a>00196                 dtsize = <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>._dsize(); 
    205 <a name="l00197"></a>00197                 utsize = <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>._dsize(); 
    206 <a name="l00198"></a>00198         } 
    207 <a name="l00200"></a><a class="code" href="classbdm_1_1ArxDS.html#ae7438127de87c5a8128edfa12255b436">00200</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#ae7438127de87c5a8128edfa12255b436" title="set options from a string">set_options</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;s ) { 
    208 <a name="l00201"></a>00201                 <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> = ( s.find ( <span class="stringliteral">&quot;L_theta&quot;</span> ) != string::npos ); 
    209 <a name="l00202"></a>00202         }; 
    210 <a name="l00203"></a><a class="code" href="classbdm_1_1ArxDS.html#a64819633a1191fcaa60d0de26ade2e52">00203</a>         <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a64819633a1191fcaa60d0de26ade2e52" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
    211 <a name="l00204"></a>00204                 <span class="comment">//DS::log_add ( L ); too long!!</span> 
    212 <a name="l00205"></a>00205                 <a class="code" href="classbdm_1_1DS.html#ab4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7">add</a> ( <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> ( 0, dt_size ), <span class="stringliteral">&quot;&quot;</span> ); 
    213 <a name="l00206"></a>00206                 L_ut = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7">add</a> ( <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>, <span class="stringliteral">&quot;&quot;</span> ); 
     182<a name="l00171"></a><a class="code" href="classbdm_1_1FileDS.html#a3c546e8d9eb71e079e046e3d2f69c6c4">00171</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a3c546e8d9eb71e079e046e3d2f69c6c4" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indices ) { 
     183<a name="l00172"></a>00172                         vec tmp = <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.get_col ( <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> ); 
     184<a name="l00173"></a>00173                         dt = tmp ( indices ); 
     185<a name="l00174"></a>00174                 } 
     186<a name="l00175"></a>00175  
     187<a name="l00177"></a><a class="code" href="classbdm_1_1FileDS.html#aa6af63065097147b390e684a7842a26a">00177</a>                 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1FileDS.html#aa6af63065097147b390e684a7842a26a" title="returns number of data in the file;">ndat</a>() { 
     188<a name="l00178"></a>00178                         <span class="keywordflow">return</span> <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>.cols(); 
     189<a name="l00179"></a>00179                 } 
     190<a name="l00181"></a><a class="code" href="classbdm_1_1FileDS.html#a998f590eeddee97ae6918671e40756b8">00181</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a998f590eeddee97ae6918671e40756b8" title="no sense to log this type">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) {}; 
     191<a name="l00183"></a><a class="code" href="classbdm_1_1FileDS.html#a59d44ef34a523127dd79c076461c43b6">00183</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1FileDS.html#a59d44ef34a523127dd79c076461c43b6" title="no sense to log this type">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) {}; 
     192<a name="l00184"></a>00184 }; 
     193<a name="l00185"></a>00185  
     194<a name="l00192"></a><a class="code" href="classbdm_1_1ITppFileDS.html">00192</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1FileDS.html">FileDS</a> { 
     195<a name="l00193"></a>00193  
     196<a name="l00194"></a>00194         <span class="keyword">public</span>: 
     197<a name="l00195"></a>00195                 <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;fname, <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;varname ) : <a class="code" href="classbdm_1_1FileDS.html">FileDS</a>() { 
     198<a name="l00196"></a>00196                         it_file it ( fname ); 
     199<a name="l00197"></a>00197                         it &lt;&lt; Name ( varname ); 
     200<a name="l00198"></a>00198                         it &gt;&gt; <a class="code" href="classbdm_1_1MemDS.html#aa724f4cbfc32e79bacc044253234e260" title="internal matrix of data">Data</a>; 
     201<a name="l00199"></a>00199                         <a class="code" href="classbdm_1_1MemDS.html#a681ee3831f68f4f20ed54e04e8b3f107" title="active column in the Data matrix">time</a> = 0; 
     202<a name="l00200"></a>00200                         <span class="comment">//rowid and delays are ignored</span> 
     203<a name="l00201"></a>00201                 }; 
     204<a name="l00202"></a>00202  
     205<a name="l00203"></a>00203                 <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> () : <a class="code" href="classbdm_1_1FileDS.html">FileDS</a>() { 
     206<a name="l00204"></a>00204                 }; 
     207<a name="l00205"></a>00205  
     208<a name="l00206"></a>00206                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ITppFileDS.html#afd192da176625a909fa853458b604566" title="This method arrange instance properties according the data stored in the Setting...">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
    214209<a name="l00207"></a>00207  
    215 <a name="l00208"></a>00208                 mat &amp;A = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#ab256b547c5156b5898a3a1e5462f9540" title="access function">_A</a>(); 
    216 <a name="l00209"></a>00209                 mat R = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a564715dea56f7bbff0083aec295ce97e" title="access function">_R</a>(); 
    217 <a name="l00210"></a>00210                 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
    218 <a name="l00211"></a>00211                         <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7">add</a> ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">&quot;{th }&quot;</span>, vec_1 ( A.rows() * A.cols() ) ), <span class="stringliteral">&quot;t&quot;</span> ); 
    219 <a name="l00212"></a>00212                 } 
    220 <a name="l00213"></a>00213                 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
    221 <a name="l00214"></a>00214                         L_R = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7">add</a> ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">&quot;{R }&quot;</span>, vec_1 ( R.rows() * R.cols() ) ), <span class="stringliteral">&quot;r&quot;</span> ); 
    222 <a name="l00215"></a>00215                 } 
    223 <a name="l00216"></a>00216         } 
    224 <a name="l00217"></a><a class="code" href="classbdm_1_1ArxDS.html#a4128f5dc3a04063d62fc7e35635aeb90">00217</a>         <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a4128f5dc3a04063d62fc7e35635aeb90" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
    225 <a name="l00218"></a>00218                 <span class="comment">//DS::logit ( L );</span> 
    226 <a name="l00219"></a>00219                 L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1DS.html#ab4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>, <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>.left ( dt_size ) ); 
    227 <a name="l00220"></a>00220                 L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( L_ut, <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a> ); 
    228 <a name="l00221"></a>00221  
    229 <a name="l00222"></a>00222                 mat &amp;A = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#ab256b547c5156b5898a3a1e5462f9540" title="access function">_A</a>(); 
    230 <a name="l00223"></a>00223                 mat R = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a564715dea56f7bbff0083aec295ce97e" title="access function">_R</a>(); 
    231 <a name="l00224"></a>00224                 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
    232 <a name="l00225"></a>00225                         L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a>, vec ( A._data(), A.rows() *A.cols() ) ); 
    233 <a name="l00226"></a>00226                 }; 
    234 <a name="l00227"></a>00227                 <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
    235 <a name="l00228"></a>00228                         L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( L_R, vec ( R._data(), R.rows() *R.rows() ) ); 
    236 <a name="l00229"></a>00229                 }; 
    237 <a name="l00230"></a>00230         } 
    238 <a name="l00231"></a>00231  
    239 <a name="l00232"></a>00232         <span class="comment">// TODO dokumentace - aktualizovat</span> 
    240 <a name="l00264"></a>00264 <span class="comment"></span>        <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a9b109ee7bba9774057b107383b6ecc24">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
    241 <a name="l00265"></a>00265  
    242 <a name="l00266"></a>00266         <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
    243 <a name="l00267"></a>00267 }; 
    244 <a name="l00268"></a>00268  
    245 <a name="l00269"></a>00269 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( ArxDS ); 
    246 <a name="l00270"></a>00270 SHAREDPTR ( ArxDS ); 
    247 <a name="l00271"></a>00271  
    248 <a name="l00272"></a><a class="code" href="classbdm_1_1stateDS.html">00272</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1stateDS.html">stateDS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
    249 <a name="l00273"></a>00273 <span class="keyword">private</span>: 
    250 <a name="l00275"></a>00275         <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> IM; 
    251 <a name="l00276"></a>00276  
    252 <a name="l00278"></a>00278         <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> OM; 
    253 <a name="l00279"></a>00279  
    254 <a name="l00280"></a>00280 <span class="keyword">protected</span>: 
    255 <a name="l00282"></a><a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918">00282</a>         vec <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a>; 
    256 <a name="l00284"></a><a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088">00284</a>         vec <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>; 
    257 <a name="l00286"></a><a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf">00286</a>         vec <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a>; 
    258 <a name="l00288"></a><a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca">00288</a>         <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>; 
    259 <a name="l00289"></a>00289  
    260 <a name="l00290"></a>00290 <span class="keyword">public</span>: 
    261 <a name="l00291"></a><a class="code" href="classbdm_1_1stateDS.html#a5c9f4a93313f69adfa97375b58c0a6c2">00291</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a5c9f4a93313f69adfa97375b58c0a6c2" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt0 ) { 
    262 <a name="l00292"></a>00292                 dt0 = <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a>; 
    263 <a name="l00293"></a>00293         } 
    264 <a name="l00294"></a>00294  
    265 <a name="l00295"></a><a class="code" href="classbdm_1_1stateDS.html#ad61e149db7c7b3a1289ac82f37c97700">00295</a>         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#ad61e149db7c7b3a1289ac82f37c97700" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt0, <span class="keyword">const</span> ivec &amp;indices ) { 
    266 <a name="l00296"></a>00296                 dt0 = <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> ( indices ); 
    267 <a name="l00297"></a>00297         } 
    268 <a name="l00298"></a>00298  
    269 <a name="l00299"></a>00299         <a class="code" href="classbdm_1_1stateDS.html">stateDS</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> &amp;IM0, <span class="keyword">const</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> &amp;OM0, <span class="keywordtype">int</span> usize ) : IM ( IM0 ), OM ( OM0 ), 
    270 <a name="l00300"></a>00300                 <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> ( OM0-&gt;dimension() ), <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> ( IM0-&gt;dimension() ), 
    271 <a name="l00301"></a>00301                 <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ( usize ), <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>(0) { } 
    272 <a name="l00302"></a>00302  
    273 <a name="l00303"></a>00303         stateDS() : <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>(0) { } 
    274 <a name="l00304"></a>00304  
    275 <a name="l00305"></a><a class="code" href="classbdm_1_1stateDS.html#a1e98f3e362e35245d565c2508527ae14">00305</a>         <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a1e98f3e362e35245d565c2508527ae14" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>() { 
    276 <a name="l00306"></a>00306                 <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> = IM-&gt;samplecond ( concat ( <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>, <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ) ); 
    277 <a name="l00307"></a>00307                 <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> = OM-&gt;samplecond ( concat ( <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>, <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ) ); 
    278 <a name="l00308"></a>00308         } 
     210<a name="l00208"></a>00208                 <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
     211<a name="l00209"></a>00209  
     212<a name="l00210"></a>00210 }; 
     213<a name="l00211"></a>00211  
     214<a name="l00212"></a>00212 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ); 
     215<a name="l00213"></a>00213 SHAREDPTR ( <a class="code" href="classbdm_1_1ITppFileDS.html" title="Read Data Matrix from an IT file.">ITppFileDS</a> ); 
     216<a name="l00214"></a>00214  
     217<a name="l00222"></a><a class="code" href="classbdm_1_1CsvFileDS.html">00222</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1CsvFileDS.html" title="CSV file data storage The constructor creates Data matrix from the records in a CSV...">CsvFileDS</a>: <span class="keyword">public</span> <a class="code" href="classbdm_1_1FileDS.html">FileDS</a> { 
     218<a name="l00223"></a>00223  
     219<a name="l00224"></a>00224         <span class="keyword">public</span>: 
     220<a name="l00226"></a>00226                 <a class="code" href="classbdm_1_1CsvFileDS.html#a8d9d56cdf6b8d0236e32a80e11c238b0" title="Constructor - create DS from a CSV file.">CsvFileDS</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span>&amp; fname, <span class="keyword">const</span> <span class="keywordtype">string</span>&amp; orientation = <span class="stringliteral">&quot;BY_COL&quot;</span> ); 
     221<a name="l00227"></a>00227 }; 
     222<a name="l00228"></a>00228  
     223<a name="l00229"></a>00229  
     224<a name="l00230"></a>00230  
     225<a name="l00235"></a><a class="code" href="classbdm_1_1ArxDS.html">00235</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1ArxDS.html" title="Generator of ARX data.">ArxDS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
     226<a name="l00236"></a>00236         <span class="keyword">protected</span>: 
     227<a name="l00238"></a><a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb">00238</a>                 <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> <a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb" title="Rv of the regressor.">Rrv</a>; 
     228<a name="l00240"></a><a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597">00240</a>                 vec <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>; 
     229<a name="l00242"></a><a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5">00242</a>                 vec <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>; 
     230<a name="l00244"></a><a class="code" href="classbdm_1_1ArxDS.html#ab2d7530264499b92c3aa32454b960abe">00244</a>                 vec <a class="code" href="classbdm_1_1ArxDS.html#ab2d7530264499b92c3aa32454b960abe" title="temporary variable for regressor">rgr</a>; 
     231<a name="l00246"></a><a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898">00246</a>                 <a class="code" href="classbdm_1_1datalink.html" title="DataLink is a connection between two data vectors Up and Down.">datalink</a> <a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898" title="data link: H -&amp;gt; rgr">rgrlnk</a>; 
     232<a name="l00248"></a><a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb">00248</a>                 <a class="code" href="classbdm_1_1mlnorm.html">mlnorm&lt;chmat&gt;</a> <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>; 
     233<a name="l00250"></a><a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1">00250</a>                 <span class="keywordtype">bool</span> <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a>; 
     234<a name="l00252"></a><a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85">00252</a>                 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a>; 
     235<a name="l00253"></a>00253                 <span class="keywordtype">int</span> L_R; 
     236<a name="l00254"></a>00254                 <span class="keywordtype">int</span> dt_size; 
     237<a name="l00255"></a>00255         <span class="keyword">public</span>: 
     238<a name="l00256"></a><a class="code" href="classbdm_1_1ArxDS.html#adb242e35812c311c8415bb7e31c3f595">00256</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#adb242e35812c311c8415bb7e31c3f595" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt ) { 
     239<a name="l00257"></a>00257                         dt = <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>; 
     240<a name="l00258"></a>00258                 } 
     241<a name="l00259"></a>00259  
     242<a name="l00260"></a><a class="code" href="classbdm_1_1ArxDS.html#a701151418bc5fc3861acef8359fb0d80">00260</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a701151418bc5fc3861acef8359fb0d80" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt, <span class="keyword">const</span> ivec &amp;indices ) { 
     243<a name="l00261"></a>00261                         dt = <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a> ( indices ); 
     244<a name="l00262"></a>00262                 } 
     245<a name="l00263"></a>00263  
     246<a name="l00264"></a><a class="code" href="classbdm_1_1ArxDS.html#a8f6da8a00abba70bc58c7a4030bd8940">00264</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a8f6da8a00abba70bc58c7a4030bd8940" title="Accepts action variable and schedule it for application.">write</a> ( vec &amp;ut ) { 
     247<a name="l00265"></a>00265                         <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a> = ut; 
     248<a name="l00266"></a>00266                 } 
     249<a name="l00267"></a>00267  
     250<a name="l00268"></a><a class="code" href="classbdm_1_1ArxDS.html#a477fd706639535f520e9dbbd19f73318">00268</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a477fd706639535f520e9dbbd19f73318" title="Accepts action variables at specific indeces.">write</a> ( vec &amp;ut, <span class="keyword">const</span> ivec &amp;indices ) { 
     251<a name="l00269"></a>00269                         <a class="code" href="bdmerror_8h.html#a89a0f906b242b79c5d3d342291b2cab4" title="Throw std::runtime_exception if t is not true and NDEBUG is not defined.">bdm_assert_debug</a> ( ut.length() == indices.length(), <span class="stringliteral">&quot;ArxDS&quot;</span> ); 
     252<a name="l00270"></a>00270                         set_subvector ( <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>, indices, ut ); 
     253<a name="l00271"></a>00271                 } 
     254<a name="l00272"></a>00272  
     255<a name="l00273"></a>00273                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a57dfa26b23cc03d53b123fa7e0474b19" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>(); 
     256<a name="l00274"></a>00274  
     257<a name="l00276"></a><a class="code" href="classbdm_1_1ArxDS.html#a7c8b418677a48041adacac8e8e9c9849">00276</a>                 <a class="code" href="classbdm_1_1ArxDS.html#a7c8b418677a48041adacac8e8e9c9849" title="Default constructor.">ArxDS</a> ( ) {}; 
     258<a name="l00278"></a><a class="code" href="classbdm_1_1ArxDS.html#a2d9abc62f1fee862f0e1c60c5c4a3c8a">00278</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a2d9abc62f1fee862f0e1c60c5c4a3c8a" title="Set parameters of the internal model, H is maximum time delay.">set_parameters</a> ( <span class="keyword">const</span> mat &amp;Th0, <span class="keyword">const</span> vec mu0, <span class="keyword">const</span> <a class="code" href="classbdm_1_1chmat.html" title="Symmetric matrix stored in square root decomposition using upper cholesky.">chmat</a> &amp;sqR0 ) { 
     259<a name="l00279"></a>00279                         <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a04f7c6cda7b2f95161dd5fbcf15d1fd5" title="Set A and R.">set_parameters</a> ( Th0, mu0, sqR0 ); 
     260<a name="l00280"></a>00280                 }; 
     261<a name="l00282"></a><a class="code" href="classbdm_1_1ArxDS.html#ad57285965debab8a4bfc340d4477c853">00282</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#ad57285965debab8a4bfc340d4477c853" title="Set.">set_drv</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;yrv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;urv, <span class="keyword">const</span> <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> &amp;rrv ) { 
     262<a name="l00283"></a>00283                         <a class="code" href="classbdm_1_1ArxDS.html#ac7b3cc6cd059ff3d7f4462cedff4bdeb" title="Rv of the regressor.">Rrv</a> = rrv; 
     263<a name="l00284"></a>00284                         <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a> = urv; 
     264<a name="l00285"></a>00285                         dt_size = yrv.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() + urv.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(); 
     265<a name="l00286"></a>00286  
     266<a name="l00287"></a>00287                         <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> drv = concat ( yrv, urv ); 
     267<a name="l00288"></a>00288                         <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> = drv; 
     268<a name="l00289"></a>00289                         <span class="keywordtype">int</span> td = rrv.<a class="code" href="classbdm_1_1RV.html#a9a5c5aeeaf39299d07763377b05a8241" title="Minimum time-offset.">mint</a>(); 
     269<a name="l00290"></a>00290                         <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>.set_size ( drv.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() * ( -td + 1 ) ); 
     270<a name="l00291"></a>00291                         <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a>.set_size ( <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>() ); 
     271<a name="l00292"></a>00292                         <span class="keywordflow">for</span> ( <span class="keywordtype">int</span> i = -1; i &gt;= td; i-- ) { 
     272<a name="l00293"></a>00293                                 drv.<a class="code" href="classbdm_1_1RV.html#a449c2b692957528976c189d27236e1ba" title="Shift time by delta.">t_plus</a> ( -1 ); 
     273<a name="l00294"></a>00294                                 <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#a87841b5ee43997b79789c0c22047e224" title="Add (concat) another variable to the current one,.">add</a> ( drv ); <span class="comment">//shift u1</span> 
     274<a name="l00295"></a>00295                         } 
     275<a name="l00296"></a>00296                         <a class="code" href="classbdm_1_1ArxDS.html#afbe7b993ec5f75c195ae1b2ccd96a898" title="data link: H -&amp;gt; rgr">rgrlnk</a>.<a class="code" href="classbdm_1_1datalink.html#afb8337aac8329eb0ca96bfb3ff73ec67" title="set connection, rv must be fully present in rv_up">set_connection</a> ( rrv, <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> ); 
     276<a name="l00297"></a>00297  
     277<a name="l00298"></a>00298                         <a class="code" href="classbdm_1_1DS.html#af96cae44624e79638a91ec4f2c7c81a9" title="size of data returned by getdata() ">dtsize</a> = <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a>.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(); 
     278<a name="l00299"></a>00299                         <a class="code" href="classbdm_1_1DS.html#ad7467046a0bd05bc992cc5e1bdedb983" title="size of data">utsize</a> = <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>.<a class="code" href="classbdm_1_1RV.html#ade30156104f61d86c94f758861418089" title="total size of a random variable">_dsize</a>(); 
     279<a name="l00300"></a>00300                 } 
     280<a name="l00302"></a><a class="code" href="classbdm_1_1ArxDS.html#ae7438127de87c5a8128edfa12255b436">00302</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#ae7438127de87c5a8128edfa12255b436" title="set options from a string">set_options</a> ( <span class="keyword">const</span> <span class="keywordtype">string</span> &amp;s ) { 
     281<a name="l00303"></a>00303                         <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> = ( s.find ( <span class="stringliteral">&quot;L_theta&quot;</span> ) != string::npos ); 
     282<a name="l00304"></a>00304                 }; 
     283<a name="l00305"></a><a class="code" href="classbdm_1_1ArxDS.html#a64819633a1191fcaa60d0de26ade2e52">00305</a>                 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a64819633a1191fcaa60d0de26ade2e52" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
     284<a name="l00306"></a>00306                         <span class="comment">//DS::log_add ( L ); too long!!</span> 
     285<a name="l00307"></a>00307                         <a class="code" href="classbdm_1_1DS.html#ab4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1DS.html#ad8db125ac35f3b8eeb773fc9a4cb45ec" title="Description of data returned by getdata().">Drv</a> ( 0, dt_size ), <span class="stringliteral">&quot;&quot;</span> ); 
     286<a name="l00308"></a>00308                         L_ut = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1DS.html#a9ac5970128fd39f4f6226723cd1de702" title="Description of data witten by by write().">Urv</a>, <span class="stringliteral">&quot;&quot;</span> ); 
    279287<a name="l00309"></a>00309  
    280 <a name="l00310"></a><a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440">00310</a>         <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
    281 <a name="l00311"></a>00311                 <a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440" title="Register DS for logging into logger L.">DS::log_add</a> ( L ); 
    282 <a name="l00312"></a>00312                 <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7">add</a> ( IM-&gt;_rv(), <span class="stringliteral">&quot;true&quot;</span> ); 
    283 <a name="l00313"></a>00313         } 
    284 <a name="l00314"></a><a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4">00314</a>         <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
    285 <a name="l00315"></a>00315                 <a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4" title="Register DS for logging into logger L.">DS::logit</a> ( L ); 
    286 <a name="l00316"></a>00316                 L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>, <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> ); 
    287 <a name="l00317"></a>00317         } 
    288 <a name="l00318"></a>00318  
    289 <a name="l00348"></a>00348         <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#aa3792e751ff4d3f66f8feec16506197b">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
    290 <a name="l00349"></a>00349  
    291 <a name="l00350"></a>00350         <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
    292 <a name="l00351"></a>00351  
    293 <a name="l00352"></a>00352 }; 
    294 <a name="l00353"></a>00353  
    295 <a name="l00354"></a>00354 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( stateDS ); 
    296 <a name="l00355"></a>00355 SHAREDPTR ( stateDS ); 
    297 <a name="l00356"></a>00356  
    298 <a name="l00357"></a>00357 }; <span class="comment">//namespace</span> 
    299 <a name="l00358"></a>00358  
    300 <a name="l00359"></a>00359 <span class="preprocessor">#endif // DS_H</span> 
     288<a name="l00310"></a>00310                         <span class="keyword">const</span> mat &amp;A = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a55e1bd7fa70b852bd7fe50ce72fb8f23" title="access function">_A</a>(); 
     289<a name="l00311"></a>00311                         <span class="keyword">const</span> mat R = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a9af0714b7b29ab1162ebc3291b7c4a43" title="access function">_R</a>(); 
     290<a name="l00312"></a>00312                         <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
     291<a name="l00313"></a>00313                                 <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">&quot;{th }&quot;</span>, vec_1 ( A.rows() * A.cols() ) ), <span class="stringliteral">&quot;t&quot;</span> ); 
     292<a name="l00314"></a>00314                         } 
     293<a name="l00315"></a>00315                         <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
     294<a name="l00316"></a>00316                                 L_R = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( <a class="code" href="classbdm_1_1RV.html" title="Class representing variables, most often random variables.">RV</a> ( <span class="stringliteral">&quot;{R }&quot;</span>, vec_1 ( R.rows() * R.cols() ) ), <span class="stringliteral">&quot;r&quot;</span> ); 
     295<a name="l00317"></a>00317                         } 
     296<a name="l00318"></a>00318                 } 
     297<a name="l00319"></a><a class="code" href="classbdm_1_1ArxDS.html#a4128f5dc3a04063d62fc7e35635aeb90">00319</a>                 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a4128f5dc3a04063d62fc7e35635aeb90" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
     298<a name="l00320"></a>00320                         <span class="comment">//DS::logit ( L );</span> 
     299<a name="l00321"></a>00321                         L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1DS.html#ab4b7bdb9d98a11ab587aa0ad803bb867" title="Remember its own index in Logger L.">L_dt</a>, <a class="code" href="classbdm_1_1ArxDS.html#aa11a3f3fbeea1d17b66b073017964597" title="History, ordered as .">H</a>.left ( dt_size ) ); 
     300<a name="l00322"></a>00322                         L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( L_ut, <a class="code" href="classbdm_1_1ArxDS.html#a392b87be85675cb3d55fa4953d671bb5" title="(future) input">U</a> ); 
     301<a name="l00323"></a>00323  
     302<a name="l00324"></a>00324                         <span class="keyword">const</span> mat &amp;A = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a55e1bd7fa70b852bd7fe50ce72fb8f23" title="access function">_A</a>(); 
     303<a name="l00325"></a>00325                         <span class="keyword">const</span> mat R = <a class="code" href="classbdm_1_1ArxDS.html#a0aa9d8d35792159dc9611802f6c190eb" title="model of Y - linear Gaussian">model</a>.<a class="code" href="classbdm_1_1mlnorm.html#a9af0714b7b29ab1162ebc3291b7c4a43" title="access function">_R</a>(); 
     304<a name="l00326"></a>00326                         <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
     305<a name="l00327"></a>00327                                 L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1ArxDS.html#ae13e5ffdfe9d896089310b0fc54e0c85" title="loggers">L_theta</a>, vec ( A._data(), A.rows() *A.cols() ) ); 
     306<a name="l00328"></a>00328                         }; 
     307<a name="l00329"></a>00329                         <span class="keywordflow">if</span> ( <a class="code" href="classbdm_1_1ArxDS.html#a064e5d3f2dc0b39459c7ca53d05223e1" title="options">opt_L_theta</a> ) { 
     308<a name="l00330"></a>00330                                 L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( L_R, vec ( R._data(), R.rows() *R.rows() ) ); 
     309<a name="l00331"></a>00331                         }; 
     310<a name="l00332"></a>00332                 } 
     311<a name="l00333"></a>00333  
     312<a name="l00334"></a>00334                 <span class="comment">// TODO dokumentace - aktualizovat</span> 
     313<a name="l00366"></a>00366 <span class="comment"></span>                <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1ArxDS.html#a9b109ee7bba9774057b107383b6ecc24">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
     314<a name="l00367"></a>00367  
     315<a name="l00368"></a>00368                 <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
     316<a name="l00369"></a>00369 }; 
     317<a name="l00370"></a>00370  
     318<a name="l00371"></a>00371 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( ArxDS ); 
     319<a name="l00372"></a>00372 SHAREDPTR ( ArxDS ); 
     320<a name="l00373"></a>00373  
     321<a name="l00374"></a><a class="code" href="classbdm_1_1stateDS.html">00374</a> <span class="keyword">class </span><a class="code" href="classbdm_1_1stateDS.html">stateDS</a> : <span class="keyword">public</span> <a class="code" href="classbdm_1_1DS.html" title="Abstract class for discrete-time sources of data.">DS</a> { 
     322<a name="l00375"></a>00375         <span class="keyword">private</span>: 
     323<a name="l00377"></a>00377                 <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> IM; 
     324<a name="l00378"></a>00378  
     325<a name="l00380"></a>00380                 <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> OM; 
     326<a name="l00381"></a>00381  
     327<a name="l00382"></a>00382         <span class="keyword">protected</span>: 
     328<a name="l00384"></a><a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918">00384</a>                 vec <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a>; 
     329<a name="l00386"></a><a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088">00386</a>                 vec <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>; 
     330<a name="l00388"></a><a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf">00388</a>                 vec <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a>; 
     331<a name="l00390"></a><a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca">00390</a>                 <span class="keywordtype">int</span> <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>; 
     332<a name="l00391"></a>00391  
     333<a name="l00392"></a>00392         <span class="keyword">public</span>: 
     334<a name="l00393"></a><a class="code" href="classbdm_1_1stateDS.html#a5c9f4a93313f69adfa97375b58c0a6c2">00393</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a5c9f4a93313f69adfa97375b58c0a6c2" title="Returns full vector of observed data=[output, input].">getdata</a> ( vec &amp;dt0 ) { 
     335<a name="l00394"></a>00394                         dt0 = <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a>; 
     336<a name="l00395"></a>00395                 } 
     337<a name="l00396"></a>00396  
     338<a name="l00397"></a><a class="code" href="classbdm_1_1stateDS.html#ad61e149db7c7b3a1289ac82f37c97700">00397</a>                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#ad61e149db7c7b3a1289ac82f37c97700" title="Returns data records at indeces.">getdata</a> ( vec &amp;dt0, <span class="keyword">const</span> ivec &amp;indices ) { 
     339<a name="l00398"></a>00398                         dt0 = <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> ( indices ); 
     340<a name="l00399"></a>00399                 } 
     341<a name="l00400"></a>00400  
     342<a name="l00401"></a>00401                 <a class="code" href="classbdm_1_1stateDS.html">stateDS</a> ( <span class="keyword">const</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> &amp;IM0, <span class="keyword">const</span> <a class="code" href="classbdm_1_1shared__ptr.html">shared_ptr&lt;mpdf&gt;</a> &amp;OM0, <span class="keywordtype">int</span> usize ) : IM ( IM0 ), OM ( OM0 ), 
     343<a name="l00402"></a>00402                                 <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> ( OM0-&gt;dimension() ), <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> ( IM0-&gt;dimension() ), 
     344<a name="l00403"></a>00403                                 <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ( usize ), <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a> ( 0 ) { } 
     345<a name="l00404"></a>00404  
     346<a name="l00405"></a>00405                 stateDS() : <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a> ( 0 ) { } 
     347<a name="l00406"></a>00406  
     348<a name="l00407"></a><a class="code" href="classbdm_1_1stateDS.html#a1e98f3e362e35245d565c2508527ae14">00407</a>                 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a1e98f3e362e35245d565c2508527ae14" title="Moves from  to , i.e. perfroms the actions and reads response of the system.">step</a>() { 
     349<a name="l00408"></a>00408                         <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> = IM-&gt;samplecond ( concat ( <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>, <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ) ); 
     350<a name="l00409"></a>00409                         <a class="code" href="classbdm_1_1stateDS.html#a839bd9979c0aa407bc575e536f0a9918" title="result storage">dt</a> = OM-&gt;samplecond ( concat ( <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a>, <a class="code" href="classbdm_1_1stateDS.html#aabbdb3dcf67a06f5a9003828819bafbf" title="input storage">ut</a> ) ); 
     351<a name="l00410"></a>00410                 } 
     352<a name="l00411"></a>00411  
     353<a name="l00412"></a><a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440">00412</a>                 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440" title="Register DS for logging into logger L.">log_add</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
     354<a name="l00413"></a>00413                         <a class="code" href="classbdm_1_1stateDS.html#ac78f44b484128e73fe31ab6d118b5440" title="Register DS for logging into logger L.">DS::log_add</a> ( L ); 
     355<a name="l00414"></a>00414                         <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a> = L.<a class="code" href="classbdm_1_1logger.html#a47aa3b098a81d02a8ffaea2c9fa09ac7" title="returns an identifier which will be later needed for calling the logit() function...">add</a> ( IM-&gt;_rv(), <span class="stringliteral">&quot;true&quot;</span> ); 
     356<a name="l00415"></a>00415                 } 
     357<a name="l00416"></a><a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4">00416</a>                 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4" title="Register DS for logging into logger L.">logit</a> ( <a class="code" href="classbdm_1_1logger.html" title="Class for storing results (and semi-results) of an experiment.">logger</a> &amp;L ) { 
     358<a name="l00417"></a>00417                         <a class="code" href="classbdm_1_1stateDS.html#a3850341d9584df6b60cb05eeea6b38f4" title="Register DS for logging into logger L.">DS::logit</a> ( L ); 
     359<a name="l00418"></a>00418                         L.<a class="code" href="classbdm_1_1logger.html#ae30f695619931b3c372ab280e452d309" title="log this vector">logit</a> ( <a class="code" href="classbdm_1_1stateDS.html#a16cdcdd5c878ebeebe7cad71c87f77ca" title="Logger.">L_xt</a>, <a class="code" href="classbdm_1_1stateDS.html#ac055a609e44f77300aa86e903df4f088" title="state storage">xt</a> ); 
     360<a name="l00419"></a>00419                 } 
     361<a name="l00420"></a>00420  
     362<a name="l00450"></a>00450                 <span class="keywordtype">void</span> <a class="code" href="classbdm_1_1stateDS.html#aa3792e751ff4d3f66f8feec16506197b">from_setting</a> ( <span class="keyword">const</span> Setting &amp;<span class="keyword">set</span> ); 
     363<a name="l00451"></a>00451  
     364<a name="l00452"></a>00452                 <span class="comment">// TODO dodelat void to_setting( Setting &amp;set ) const;</span> 
     365<a name="l00453"></a>00453  
     366<a name="l00454"></a>00454 }; 
     367<a name="l00455"></a>00455  
     368<a name="l00456"></a>00456 <a class="code" href="user__info_8h.html#a4f9de2f17e844047726487b99def99c6" title="Macro for registration of class into map of user-infos, registered class is scriptable...">UIREGISTER</a> ( stateDS ); 
     369<a name="l00457"></a>00457 SHAREDPTR ( stateDS ); 
     370<a name="l00458"></a>00458  
     371<a name="l00459"></a>00459 }; <span class="comment">//namespace</span> 
     372<a name="l00460"></a>00460  
     373<a name="l00461"></a>00461 <span class="preprocessor">#endif // DS_H</span> 
    301374</pre></div></div> 
    302 <hr size="1"/><address style="text-align: right;"><small>Generated on Sun Aug 30 22:10:49 2009 for mixpp by&nbsp; 
     375<hr size="1"/><address style="text-align: right;"><small>Generated on Tue Sep 8 22:11:32 2009 for mixpp by&nbsp; 
    303376<a href="http://www.doxygen.org/index.html"> 
    304377<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>